RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 ITSN1Q15811 1721 aa7.58□□□□□ -1.2
CHD2-224ENST00000636410 TOPAZ1Q8N9V7 1692 aa7.57□□□□□ -1.2
CHD2-224ENST00000636410 ROBO1Q9Y6N7 1651 aa7.57□□□□□ -1.2
CHD2-224ENST00000636410 USP32Q8NFA0 1604 aa7.57□□□□□ -1.2
CHD2-224ENST00000636410 C14orf37Q86TY3 774 aa7.57□□□□□ -1.2
CHD2-224ENST00000636410 PRAM1Q96QH2 718 aa7.57□□□□□ -1.2
CHD2-224ENST00000636410 CARD11Q9BXL7 1154 aa7.57□□□□□ -1.2
CHD2-224ENST00000636410 C19orf44Q9H6X5 657 aa7.57□□□□□ -1.2
CHD2-224ENST00000636410 KIF1AQ12756 1690 aa7.57□□□□□ -1.2
CHD2-224ENST00000636410 RGPD8O14715 1765 aaPredicted RBP7.56□□□□□ -1.2
CHD2-224ENST00000636410 MST1RQ04912 1400 aa7.56□□□□□ -1.2
CHD2-224ENST00000636410 WAPLQ7Z5K2 1190 aa7.56□□□□□ -1.2
CHD2-224ENST00000636410 POGKQ9P215 609 aa7.56□□□□□ -1.2
CHD2-224ENST00000636410 TULP4Q9NRJ4 1543 aa7.56□□□□□ -1.2
CHD2-224ENST00000636410 NHSL1Q5SYE7 1610 aa7.56□□□□□ -1.2
CHD2-224ENST00000636410 CENPJQ9HC77 1338 aaPredicted RBP7.55□□□□□ -1.2
CHD2-224ENST00000636410 CADPS2Q86UW7 1296 aa7.55□□□□□ -1.2
CHD2-224ENST00000636410 USP47Q96K76 1375 aa7.55□□□□□ -1.2
CHD2-224ENST00000636410 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
CHD2-224ENST00000636410 ANKARQ7Z5J8 1434 aa7.54□□□□□ -1.2
CHD2-224ENST00000636410 UBAP1LF5GYI3 381 aa7.54□□□□□ -1.2
CHD2-224ENST00000636410 TOM1O60784 492 aa7.54□□□□□ -1.2
CHD2-224ENST00000636410 ATF3P18847 181 aa7.54□□□□□ -1.2
CHD2-224ENST00000636410 SAFB2Q14151 953 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHD2-224ENST00000636410 C1orf167Q5SNV9 1468 aa7.54□□□□□ -1.2
CHD2-224ENST00000636410 MINK1Q8N4C8 1332 aaPredicted RBP7.53□□□□□ -1.2
CHD2-224ENST00000636410 AHDC1Q5TGY3 1603 aaPredicted RBP7.53□□□□□ -1.2
CHD2-224ENST00000636410 PHLPP1O60346 1717 aa7.53□□□□□ -1.2
CHD2-224ENST00000636410 FBXO41Q8TF61 875 aa7.53□□□□□ -1.2
CHD2-224ENST00000636410 ATP7BP35670 1465 aa7.53□□□□□ -1.2
CHD2-224ENST00000636410 HIRIP3Q9BW71 556 aaPredicted RBP7.52□□□□□ -1.21
CHD2-224ENST00000636410 MYOM1P52179 1685 aa7.51□□□□□ -1.21
CHD2-224ENST00000636410 WASLO00401 505 aaPredicted RBP7.51□□□□□ -1.21
CHD2-224ENST00000636410 SLAIN2Q9P270 581 aa7.51□□□□□ -1.21
CHD2-224ENST00000636410 COL16A1Q07092 1604 aaPredicted RBP7.51□□□□□ -1.21
CHD2-224ENST00000636410 AKAP12Q02952 1782 aa7.51□□□□□ -1.21
CHD2-224ENST00000636410 ST20-MTHFSA0A0A6YYL1 179 aa7.5□□□□□ -1.21
CHD2-224ENST00000636410 ZEB1P37275 1124 aaPredicted RBP7.5□□□□□ -1.21
CHD2-224ENST00000636410 PIP4K2BP78356 416 aa7.5□□□□□ -1.21
CHD2-224ENST00000636410 EVC2Q86UK5 1308 aa7.5□□□□□ -1.21
CHD2-224ENST00000636410 SCAF1Q9H7N4 1312 aaKnown RBP7.5□□□□□ -1.21
CHD2-224ENST00000636410 SHPRHQ149N8 1683 aa7.49□□□□□ -1.21
CHD2-224ENST00000636410 SLC24A1O60721 1099 aa7.49□□□□□ -1.21
CHD2-224ENST00000636410 EIF4G2P78344 907 aaKnown RBP eCLIP7.49□□□□□ -1.21
CHD2-224ENST00000636410 BRINP3Q76B58 766 aa7.49□□□□□ -1.21
CHD2-224ENST00000636410 TESK2Q96S53 571 aa7.49□□□□□ -1.21
CHD2-224ENST00000636410 MON2Q7Z3U7 1717 aa7.49□□□□□ -1.21
CHD2-224ENST00000636410 TRPM3Q9HCF6 1732 aaPredicted RBP7.49□□□□□ -1.21
CHD2-224ENST00000636410 PRR36Q9H6K5 1346 aa7.49□□□□□ -1.21
CHD2-224ENST00000636410 ATAD2Q6PL18 1390 aa7.48□□□□□ -1.21
CHD2-224ENST00000636410 NUTM2FA1L443 756 aa7.48□□□□□ -1.21
CHD2-224ENST00000636410 SRPK2P78362 688 aaKnown RBP7.48□□□□□ -1.21
CHD2-224ENST00000636410 NRKQ7Z2Y5 1582 aa7.48□□□□□ -1.21
CHD2-224ENST00000636410 CDK19Q9BWU1 502 aa7.48□□□□□ -1.21
CHD2-224ENST00000636410 PXDNQ92626 1479 aa7.48□□□□□ -1.21
CHD2-224ENST00000636410 DISP3Q9P2K9 1392 aa7.47□□□□□ -1.21
CHD2-224ENST00000636410 PPIP5K1Q6PFW1 1433 aa7.47□□□□□ -1.21
CHD2-224ENST00000636410 HSPA5P11021 654 aaKnown RBP7.47□□□□□ -1.21
CHD2-224ENST00000636410 ESCO1Q5FWF5 840 aa7.47□□□□□ -1.21
CHD2-224ENST00000636410 NUDT16Q96DE0 195 aaKnown RBP7.47□□□□□ -1.21
CHD2-224ENST00000636410 ORAI2Q96SN7 254 aa7.47□□□□□ -1.21
CHD2-224ENST00000636410 CABP2Q9NPB3 220 aa7.47□□□□□ -1.21
CHD2-224ENST00000636410 COL22A1Q8NFW1 1626 aaPredicted RBP7.47□□□□□ -1.21
CHD2-224ENST00000636410 ALS2Q96Q42 1657 aa7.47□□□□□ -1.21
CHD2-224ENST00000636410 TMF1P82094 1093 aa7.46□□□□□ -1.22
CHD2-224ENST00000636410 PUS7Q96PZ0 661 aaKnown RBP7.46□□□□□ -1.22
CHD2-224ENST00000636410 PHF8Q9UPP1 1060 aa7.46□□□□□ -1.22
CHD2-224ENST00000636410 ABCA3Q99758 1704 aa7.46□□□□□ -1.22
CHD2-224ENST00000636410 NPHP3Q7Z494 1330 aa7.46□□□□□ -1.22
CHD2-224ENST00000636410 POLR3AO14802 1390 aaPredicted RBP7.46□□□□□ -1.22
CHD2-224ENST00000636410 NINLQ9Y2I6 1382 aa7.46□□□□□ -1.22
CHD2-224ENST00000636410 CRYBG1Q9Y4K1 1723 aa7.45□□□□□ -1.22
CHD2-224ENST00000636410 CCDC61Q9Y6R9 512 aa7.45□□□□□ -1.22
CHD2-224ENST00000636410 PLEKHG3A1L390 1219 aa7.44□□□□□ -1.22
CHD2-224ENST00000636410 HSPA1LP34931 641 aa7.44□□□□□ -1.22
CHD2-224ENST00000636410 CDCA8Q53HL2 280 aa7.44□□□□□ -1.22
CHD2-224ENST00000636410 ILDR1Q86SU0 546 aaPredicted RBP7.44□□□□□ -1.22
CHD2-224ENST00000636410 PMFBP1Q8TBY8 1022 aa7.44□□□□□ -1.22
CHD2-224ENST00000636410 SOS2Q07890 1332 aaPredicted RBP7.44□□□□□ -1.22
CHD2-224ENST00000636410 PHRF1Q9P1Y6 1649 aaKnown RBP7.44□□□□□ -1.22
CHD2-224ENST00000636410 PIK3C2AO00443 1686 aa7.44□□□□□ -1.22
CHD2-224ENST00000636410 USP54Q70EL1 1684 aa7.44□□□□□ -1.22
CHD2-224ENST00000636410 MARF1Q9Y4F3 1742 aaKnown RBP7.44□□□□□ -1.22
CHD2-224ENST00000636410 CPSF1Q10570 1443 aaKnown RBP7.44□□□□□ -1.22
CHD2-224ENST00000636410 TNS3Q68CZ2 1445 aa7.44□□□□□ -1.22
CHD2-224ENST00000636410 CD163L1Q9NR16 1453 aa7.43□□□□□ -1.22
CHD2-224ENST00000636410 KIF20BQ96Q89 1820 aa7.43□□□□□ -1.22
CHD2-224ENST00000636410 MED1Q15648 1581 aaPredicted RBP7.43□□□□□ -1.22
CHD2-224ENST00000636410 FOXO3O43524 673 aa7.43□□□□□ -1.22
CHD2-224ENST00000636410 NGDNQ8NEJ9 315 aaKnown RBP7.43□□□□□ -1.22
CHD2-224ENST00000636410 DDX17Q92841 729 aaKnown RBP7.43□□□□□ -1.22
CHD2-224ENST00000636410 ACEP12821 1306 aa7.43□□□□□ -1.22
CHD2-224ENST00000636410 SBNO1A3KN83 1393 aa7.43□□□□□ -1.22
CHD2-224ENST00000636410 BRD4O60885 1362 aaPredicted RBP7.43□□□□□ -1.22
CHD2-224ENST00000636410 USP6P35125 1406 aa7.43□□□□□ -1.22
CHD2-224ENST00000636410 CABP1Q9NZU7 370 aa7.42□□□□□ -1.22
CHD2-224ENST00000636410 ANKRD36BQ8N2N9 1353 aa7.42□□□□□ -1.22
CHD2-224ENST00000636410 JCADQ9P266 1359 aa7.42□□□□□ -1.22
CHD2-224ENST00000636410 ANKRD26Q9UPS8 1709 aa7.41□□□□□ -1.22
CHD2-224ENST00000636410 XPCQ01831 940 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms