RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 CENPJQ9HC77 1338 aaPredicted RBP16.46■□□□□ 0.23
PTPN11-205ENST00000635625 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.22
PTPN11-205ENST00000635625 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
PTPN11-205ENST00000635625 KDM4FA0A1W2PPD8 638 aa16.45■□□□□ 0.22
PTPN11-205ENST00000635625 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
PTPN11-205ENST00000635625 RCAN3Q9UKA8 241 aa16.45■□□□□ 0.22
PTPN11-205ENST00000635625 WDR43Q15061 677 aaKnown RBP eCLIP16.44■□□□□ 0.22
PTPN11-205ENST00000635625 NGEFQ8N5V2 710 aa16.44■□□□□ 0.22
PTPN11-205ENST00000635625 PREX1Q8TCU6 1659 aa16.44■□□□□ 0.22
PTPN11-205ENST00000635625 SPDYE2BA6NHP3 402 aa16.43■□□□□ 0.22
PTPN11-205ENST00000635625 SPDYE6P0CI01 402 aa16.43■□□□□ 0.22
PTPN11-205ENST00000635625 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
PTPN11-205ENST00000635625 ARHGEF28Q8N1W1 1705 aaKnown RBP16.43■□□□□ 0.22
PTPN11-205ENST00000635625 GGT6Q6P531 493 aa16.43■□□□□ 0.22
PTPN11-205ENST00000635625 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
PTPN11-205ENST00000635625 CFAP65Q6ZU64 1925 aaKnown RBP16.42■□□□□ 0.22
PTPN11-205ENST00000635625 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
PTPN11-205ENST00000635625 SLC52A1Q9NWF4 448 aa16.41■□□□□ 0.22
PTPN11-205ENST00000635625 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
PTPN11-205ENST00000635625 VGFO15240 615 aaPredicted RBP16.41■□□□□ 0.22
PTPN11-205ENST00000635625 AGLP35573 1532 aa16.4■□□□□ 0.22
PTPN11-205ENST00000635625 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
PTPN11-205ENST00000635625 TMEM131LA2VDJ0 1609 aa16.38■□□□□ 0.21
PTPN11-205ENST00000635625 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
PTPN11-205ENST00000635625 ADAMTS8Q9UP79 889 aa16.37■□□□□ 0.21
PTPN11-205ENST00000635625 POLR3AO14802 1390 aaPredicted RBP16.37■□□□□ 0.21
PTPN11-205ENST00000635625 NSD2O96028 1365 aa16.37■□□□□ 0.21
PTPN11-205ENST00000635625 YEATS2Q9ULM3 1422 aa16.36■□□□□ 0.21
PTPN11-205ENST00000635625 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
PTPN11-205ENST00000635625 ZNF521Q96K83 1311 aa16.35■□□□□ 0.21
PTPN11-205ENST00000635625 ANP32EQ9BTT0 268 aa16.33■□□□□ 0.21
PTPN11-205ENST00000635625 CLTCQ00610 1675 aaKnown RBP16.33■□□□□ 0.21
PTPN11-205ENST00000635625 EVC2Q86UK5 1308 aa16.33■□□□□ 0.2
PTPN11-205ENST00000635625 MYO5BQ9ULV0 1848 aa16.32■□□□□ 0.2
PTPN11-205ENST00000635625 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
PTPN11-205ENST00000635625 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
PTPN11-205ENST00000635625 CARD14Q9BXL6 1004 aa16.31■□□□□ 0.2
PTPN11-205ENST00000635625 GOLGA2Q08379 1002 aa16.31■□□□□ 0.2
PTPN11-205ENST00000635625 SSUH2Q9Y2M2 353 aa16.31■□□□□ 0.2
PTPN11-205ENST00000635625 ANKRD36BQ8N2N9 1353 aa16.31■□□□□ 0.2
PTPN11-205ENST00000635625 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
PTPN11-205ENST00000635625 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
PTPN11-205ENST00000635625 CDCA7LQ96GN5 454 aa16.3■□□□□ 0.2
PTPN11-205ENST00000635625 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
PTPN11-205ENST00000635625 CGNL1Q0VF96 1302 aa16.29■□□□□ 0.2
PTPN11-205ENST00000635625 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-205ENST00000635625 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-205ENST00000635625 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
PTPN11-205ENST00000635625 SPATA31D1Q6ZQQ2 1576 aa16.28■□□□□ 0.2
PTPN11-205ENST00000635625 IDI1Q13907 227 aa16.27■□□□□ 0.2
PTPN11-205ENST00000635625 ARHGEF40Q8TER5 1519 aa16.27■□□□□ 0.19
PTPN11-205ENST00000635625 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
PTPN11-205ENST00000635625 NKTRP30414 1462 aaKnown RBP16.26■□□□□ 0.19
PTPN11-205ENST00000635625 TRMT2AQ8IZ69 625 aaKnown RBP16.26■□□□□ 0.19
PTPN11-205ENST00000635625 EXOC6Q8TAG9 804 aa16.26■□□□□ 0.19
PTPN11-205ENST00000635625 ATAD2Q6PL18 1390 aa16.25■□□□□ 0.19
PTPN11-205ENST00000635625 DLC1Q96QB1 1528 aa16.25■□□□□ 0.19
PTPN11-205ENST00000635625 MED14O60244 1454 aa16.25■□□□□ 0.19
PTPN11-205ENST00000635625 PTPRMP28827 1452 aa16.25■□□□□ 0.19
PTPN11-205ENST00000635625 SLFN5Q08AF3 891 aa16.25■□□□□ 0.19
PTPN11-205ENST00000635625 MORC1Q86VD1 984 aa16.25■□□□□ 0.19
PTPN11-205ENST00000635625 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
PTPN11-205ENST00000635625 E9PSI1 815 aa16.24■□□□□ 0.19
PTPN11-205ENST00000635625 TCERG1O14776 1098 aaKnown RBP16.24■□□□□ 0.19
PTPN11-205ENST00000635625 TMEM132EQ6IEE7 984 aa16.23■□□□□ 0.19
PTPN11-205ENST00000635625 AKT1S1Q96B36 256 aa16.23■□□□□ 0.19
PTPN11-205ENST00000635625 MS4A1P11836 297 aa16.23■□□□□ 0.19
PTPN11-205ENST00000635625 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
PTPN11-205ENST00000635625 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
PTPN11-205ENST00000635625 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
PTPN11-205ENST00000635625 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
PTPN11-205ENST00000635625 ABCC11Q96J66 1382 aa16.21■□□□□ 0.19
PTPN11-205ENST00000635625 SLC12A5Q9H2X9 1139 aa16.2■□□□□ 0.18
PTPN11-205ENST00000635625 SETD1AO15047 1707 aaKnown RBP16.19■□□□□ 0.18
PTPN11-205ENST00000635625 APAF1O14727 1248 aa16.18■□□□□ 0.18
PTPN11-205ENST00000635625 ADAMTSL3P82987 1691 aa16.18■□□□□ 0.18
PTPN11-205ENST00000635625 ADGRB2O60241 1585 aa16.18■□□□□ 0.18
PTPN11-205ENST00000635625 MLECQ14165 292 aa16.18■□□□□ 0.18
PTPN11-205ENST00000635625 RUNDC1Q96C34 613 aa16.18■□□□□ 0.18
PTPN11-205ENST00000635625 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
PTPN11-205ENST00000635625 CRBNQ96SW2 442 aa16.17■□□□□ 0.18
PTPN11-205ENST00000635625 KIF20BQ96Q89 1820 aa16.17■□□□□ 0.18
PTPN11-205ENST00000635625 A2ML1A8K2U0 1454 aa16.17■□□□□ 0.18
PTPN11-205ENST00000635625 CCDC27Q2M243 656 aa16.16■□□□□ 0.18
PTPN11-205ENST00000635625 TERF2IPQ9NYB0 399 aa16.16■□□□□ 0.18
PTPN11-205ENST00000635625 CCDC146Q8IYE0 955 aa16.15■□□□□ 0.18
PTPN11-205ENST00000635625 KNDC1Q76NI1 1749 aa16.15■□□□□ 0.18
PTPN11-205ENST00000635625 ANP32AP39687 249 aaKnown RBP16.15■□□□□ 0.18
PTPN11-205ENST00000635625 A0A1W2PP64 1363 aa16.15■□□□□ 0.18
PTPN11-205ENST00000635625 ATP7BP35670 1465 aa16.14■□□□□ 0.17
PTPN11-205ENST00000635625 CENPQQ7L2Z9 268 aaPredicted RBP16.13■□□□□ 0.17
PTPN11-205ENST00000635625 WDR63Q8IWG1 891 aa16.13■□□□□ 0.17
PTPN11-205ENST00000635625 PROM2Q8N271 834 aa16.13■□□□□ 0.17
PTPN11-205ENST00000635625 RIMS2Q9UQ26 1411 aa16.13■□□□□ 0.17
PTPN11-205ENST00000635625 PLIN1O60240 522 aa16.12■□□□□ 0.17
PTPN11-205ENST00000635625 AAMPQ13685 434 aa16.12■□□□□ 0.17
PTPN11-205ENST00000635625 WWC1Q8IX03 1113 aa16.12■□□□□ 0.17
PTPN11-205ENST00000635625 POGKQ9P215 609 aa16.12■□□□□ 0.17
PTPN11-205ENST00000635625 STAG3Q9UJ98 1225 aa16.12■□□□□ 0.17
PTPN11-205ENST00000635625 MTHFSP49914 203 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms