RNA–Protein interactions for RNA: ENST00000633522.1

LINC01002-229, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5

Gene LINC01002, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-229ENST00000633522 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.41
LINC01002-229ENST00000633522 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.4
LINC01002-229ENST00000633522 ONECUT3O60422 494 aaPredicted RBP17.56■□□□□ 0.4
LINC01002-229ENST00000633522 SF3B2Q13435 895 aaKnown RBP17.55■□□□□ 0.4
LINC01002-229ENST00000633522 UNC5CLQ8IV45 518 aa17.55■□□□□ 0.4
LINC01002-229ENST00000633522 SEPT12Q8IYM1 358 aa17.54■□□□□ 0.4
LINC01002-229ENST00000633522 NWD2Q9ULI1 1742 aa17.54■□□□□ 0.4
LINC01002-229ENST00000633522 USP32Q8NFA0 1604 aa17.54■□□□□ 0.4
LINC01002-229ENST00000633522 PLCH1Q4KWH8 1693 aa17.53■□□□□ 0.4
LINC01002-229ENST00000633522 ADGRL2O95490 1459 aa17.53■□□□□ 0.4
LINC01002-229ENST00000633522 DISP2A7MBM2 1401 aa17.53■□□□□ 0.4
LINC01002-229ENST00000633522 R3HDM1Q15032 1099 aaKnown RBP17.52■□□□□ 0.4
LINC01002-229ENST00000633522 KANK4Q5T7N3 995 aaPredicted RBP17.52■□□□□ 0.4
LINC01002-229ENST00000633522 CAMTA1Q9Y6Y1 1673 aa17.51■□□□□ 0.39
LINC01002-229ENST00000633522 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
LINC01002-229ENST00000633522 PRAG1Q86YV5 1406 aa17.5■□□□□ 0.39
LINC01002-229ENST00000633522 BAG6P46379 1132 aa17.5■□□□□ 0.39
LINC01002-229ENST00000633522 CHGAP10645 457 aaKnown RBP17.48■□□□□ 0.39
LINC01002-229ENST00000633522 KRT27Q7Z3Y8 459 aa17.48■□□□□ 0.39
LINC01002-229ENST00000633522 EN1Q05925 392 aaPredicted RBP17.47■□□□□ 0.39
LINC01002-229ENST00000633522 RREB1Q92766 1687 aa17.47■□□□□ 0.39
LINC01002-229ENST00000633522 ABCA3Q99758 1704 aa17.47■□□□□ 0.39
LINC01002-229ENST00000633522 VPS72Q15906 364 aa17.46■□□□□ 0.39
LINC01002-229ENST00000633522 NRAPQ86VF7 1730 aa17.46■□□□□ 0.39
LINC01002-229ENST00000633522 ROBO2Q9HCK4 1378 aa17.45■□□□□ 0.38
LINC01002-229ENST00000633522 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
LINC01002-229ENST00000633522 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
LINC01002-229ENST00000633522 NPHP3Q7Z494 1330 aa17.44■□□□□ 0.38
LINC01002-229ENST00000633522 NUP188Q5SRE5 1749 aa17.44■□□□□ 0.38
LINC01002-229ENST00000633522 NEXMIFQ5QGS0 1516 aa17.43■□□□□ 0.38
LINC01002-229ENST00000633522 ANKRD50Q9ULJ7 1429 aa17.43■□□□□ 0.38
LINC01002-229ENST00000633522 THSD7AQ9UPZ6 1657 aa17.4■□□□□ 0.38
LINC01002-229ENST00000633522 ZNF784Q8NCA9 323 aaPredicted RBP17.4■□□□□ 0.38
LINC01002-229ENST00000633522 CHD4Q14839 1912 aa17.39■□□□□ 0.37
LINC01002-229ENST00000633522 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
LINC01002-229ENST00000633522 SENP3-EIF4A1A0A087X0R7 540 aa17.38■□□□□ 0.37
LINC01002-229ENST00000633522 XPCQ01831 940 aaPredicted RBP17.38■□□□□ 0.37
LINC01002-229ENST00000633522 EZH2Q15910 746 aaKnown RBP17.38■□□□□ 0.37
LINC01002-229ENST00000633522 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
LINC01002-229ENST00000633522 NINLQ9Y2I6 1382 aa17.37■□□□□ 0.37
LINC01002-229ENST00000633522 FOXO3O43524 673 aa17.36■□□□□ 0.37
LINC01002-229ENST00000633522 SPATA31A3Q5VYP0 1347 aa17.36■□□□□ 0.37
LINC01002-229ENST00000633522 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
LINC01002-229ENST00000633522 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
LINC01002-229ENST00000633522 C1QTNF8P60827 252 aa17.33■□□□□ 0.36
LINC01002-229ENST00000633522 ESCO1Q5FWF5 840 aa17.33■□□□□ 0.36
LINC01002-229ENST00000633522 FAM182BQ5T319 152 aa17.33■□□□□ 0.36
LINC01002-229ENST00000633522 KIF1AQ12756 1690 aa17.32■□□□□ 0.36
LINC01002-229ENST00000633522 FMN2Q9NZ56 1722 aa17.31■□□□□ 0.36
LINC01002-229ENST00000633522 PARD3Q8TEW0 1356 aa17.3■□□□□ 0.36
LINC01002-229ENST00000633522 CLTCL1P53675 1640 aa17.3■□□□□ 0.36
LINC01002-229ENST00000633522 CASZ1Q86V15 1759 aa17.3■□□□□ 0.36
LINC01002-229ENST00000633522 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
LINC01002-229ENST00000633522 RGPD8O14715 1765 aaPredicted RBP17.29■□□□□ 0.36
LINC01002-229ENST00000633522 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
LINC01002-229ENST00000633522 TNS3Q68CZ2 1445 aa17.27■□□□□ 0.35
LINC01002-229ENST00000633522 CCDC144AA2RUR9 1427 aa17.26■□□□□ 0.35
LINC01002-229ENST00000633522 NAIPQ13075 1403 aa17.26■□□□□ 0.35
LINC01002-229ENST00000633522 KIF1BO60333 1816 aa17.26■□□□□ 0.35
LINC01002-229ENST00000633522 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
LINC01002-229ENST00000633522 CABLES1Q8TDN4 633 aa17.25■□□□□ 0.35
LINC01002-229ENST00000633522 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
LINC01002-229ENST00000633522 COL14A1Q05707 1796 aaKnown RBP17.25■□□□□ 0.35
LINC01002-229ENST00000633522 GOLGB1Q14789 3259 aaKnown RBP17.25■□□□□ 0.35
LINC01002-229ENST00000633522 NRKQ7Z2Y5 1582 aa17.24■□□□□ 0.35
LINC01002-229ENST00000633522 SPON1Q9HCB6 807 aa17.24■□□□□ 0.35
LINC01002-229ENST00000633522 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
LINC01002-229ENST00000633522 MYOM1P52179 1685 aa17.23■□□□□ 0.35
LINC01002-229ENST00000633522 KCNQ2O43526 872 aa17.23■□□□□ 0.35
LINC01002-229ENST00000633522 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
LINC01002-229ENST00000633522 PPLO60437 1756 aa17.21■□□□□ 0.35
LINC01002-229ENST00000633522 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.34
LINC01002-229ENST00000633522 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.34
LINC01002-229ENST00000633522 TRIM37O94972 964 aa17.2■□□□□ 0.34
LINC01002-229ENST00000633522 TECPR2O15040 1411 aa17.2■□□□□ 0.34
LINC01002-229ENST00000633522 KNDC1Q76NI1 1749 aa17.19■□□□□ 0.34
LINC01002-229ENST00000633522 TRPM3Q9HCF6 1732 aaPredicted RBP17.19■□□□□ 0.34
LINC01002-229ENST00000633522 IFT172Q9UG01 1749 aa17.19■□□□□ 0.34
LINC01002-229ENST00000633522 A0A0G2JS52 829 aa17.19■□□□□ 0.34
LINC01002-229ENST00000633522 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
LINC01002-229ENST00000633522 MYT1Q01538 1121 aa17.19■□□□□ 0.34
LINC01002-229ENST00000633522 KRT28Q7Z3Y7 464 aa17.19■□□□□ 0.34
LINC01002-229ENST00000633522 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
LINC01002-229ENST00000633522 RGPD3A6NKT7 1758 aaPredicted RBP17.19■□□□□ 0.34
LINC01002-229ENST00000633522 RGPD4Q7Z3J3 1758 aa17.19■□□□□ 0.34
LINC01002-229ENST00000633522 ALS2Q96Q42 1657 aa17.18■□□□□ 0.34
LINC01002-229ENST00000633522 SBNO1A3KN83 1393 aa17.17■□□□□ 0.34
LINC01002-229ENST00000633522 NUP155O75694 1391 aa17.16■□□□□ 0.34
LINC01002-229ENST00000633522 RRBP1Q9P2E9 1410 aaKnown RBP17.16■□□□□ 0.34
LINC01002-229ENST00000633522 NUTM2FA1L443 756 aa17.16■□□□□ 0.34
LINC01002-229ENST00000633522 APBA3O96018 575 aa17.16■□□□□ 0.34
LINC01002-229ENST00000633522 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
LINC01002-229ENST00000633522 NRXN1Q9ULB1 1477 aa17.15■□□□□ 0.34
LINC01002-229ENST00000633522 FAM196AQ6ZSG2 479 aa17.14■□□□□ 0.33
LINC01002-229ENST00000633522 PLEKHH1Q9ULM0 1364 aa17.13■□□□□ 0.33
LINC01002-229ENST00000633522 PTGER2P43116 358 aa17.12■□□□□ 0.33
LINC01002-229ENST00000633522 ARHGEF10O15013 1369 aa17.12■□□□□ 0.33
LINC01002-229ENST00000633522 SBF2Q86WG5 1849 aa17.12■□□□□ 0.33
LINC01002-229ENST00000633522 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
LINC01002-229ENST00000633522 HAP1P54257 671 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms