RNA–Protein interactions for RNA: ENST00000633151.1

LINC01002-222, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 530 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-222	ENST00000633151	ANKLE1	Q8NAG6	615 aa		7.48	□□□□□ -1.21
LINC01002-222	ENST00000633151	HLA-C	Q95604	372 aa		7.48	□□□□□ -1.21
LINC01002-222	ENST00000633151	KDM4A	O75164	1064 aa		7.47	□□□□□ -1.21
LINC01002-222	ENST00000633151	PRDM9	Q9NQV7	894 aa		7.47	□□□□□ -1.21
LINC01002-222	ENST00000633151	EEA1	Q15075	1411 aa		7.46	□□□□□ -1.21
LINC01002-222	ENST00000633151	HOXA2	O43364	376 aa		7.46	□□□□□ -1.22
LINC01002-222	ENST00000633151	TTLL12	Q14166	644 aa	Predicted RBP	7.46	□□□□□ -1.22
LINC01002-222	ENST00000633151	PLA2G2C	Q5R387	149 aa		7.46	□□□□□ -1.22
LINC01002-222	ENST00000633151	BRICD5	Q6PL45	260 aa		7.46	□□□□□ -1.22
LINC01002-222	ENST00000633151	SALL2	Q9Y467	1007 aa	Predicted RBP	7.46	□□□□□ -1.22
LINC01002-222	ENST00000633151	FMNL1	O95466	1100 aa	Predicted RBP	7.45	□□□□□ -1.22
LINC01002-222	ENST00000633151	FAM160A2	Q8N612	972 aa	Predicted RBP	7.45	□□□□□ -1.22
LINC01002-222	ENST00000633151	YTHDC1	Q96MU7	727 aa	Known RBP	7.45	□□□□□ -1.22
LINC01002-222	ENST00000633151	TRIM66	O15016	1216 aa		7.44	□□□□□ -1.22
LINC01002-222	ENST00000633151	USP46	P62068	366 aa		7.44	□□□□□ -1.22
LINC01002-222	ENST00000633151	GRIPAP1	Q4V328	841 aa		7.44	□□□□□ -1.22
LINC01002-222	ENST00000633151	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.44	□□□□□ -1.22
LINC01002-222	ENST00000633151	PARP9	Q8IXQ6	854 aa		7.44	□□□□□ -1.22
LINC01002-222	ENST00000633151	FANCI	Q9NVI1	1328 aa		7.44	□□□□□ -1.22
LINC01002-222	ENST00000633151	PRKCSH	P14314	528 aa	Predicted RBP	7.43	□□□□□ -1.22
LINC01002-222	ENST00000633151	GUCA2A	Q02747	115 aa		7.43	□□□□□ -1.22
LINC01002-222	ENST00000633151	MSS51	Q4VC12	460 aa		7.43	□□□□□ -1.22
LINC01002-222	ENST00000633151	LIAT1	Q6ZQX7	453 aa		7.43	□□□□□ -1.22
LINC01002-222	ENST00000633151	SSTR3	P32745	418 aa	Predicted RBP	7.42	□□□□□ -1.22
LINC01002-222	ENST00000633151	SLC19A1	P41440	591 aa		7.42	□□□□□ -1.22
LINC01002-222	ENST00000633151		Q3C1V9	767 aa		7.41	□□□□□ -1.22
LINC01002-222	ENST00000633151	ERICH6B	Q5W0A0	696 aa		7.41	□□□□□ -1.22
LINC01002-222	ENST00000633151	SPRYD7	Q5W111	196 aa		7.41	□□□□□ -1.22
LINC01002-222	ENST00000633151	TRIM67	Q6ZTA4	783 aa		7.41	□□□□□ -1.22
LINC01002-222	ENST00000633151	AK7	Q96M32	723 aa		7.41	□□□□□ -1.22
LINC01002-222	ENST00000633151	FCF1	Q9Y324	198 aa	Known RBP	7.41	□□□□□ -1.22
LINC01002-222	ENST00000633151	LCE2B	O14633	110 aa		7.4	□□□□□ -1.22
LINC01002-222	ENST00000633151	GFRA3	O60609	400 aa		7.4	□□□□□ -1.22
LINC01002-222	ENST00000633151	SLC24A3	Q9HC58	644 aa		7.4	□□□□□ -1.22
LINC01002-222	ENST00000633151	RBM19	Q9Y4C8	960 aa	Known RBP	7.4	□□□□□ -1.22
LINC01002-222	ENST00000633151	CEP162	Q5TB80	1403 aa		7.39	□□□□□ -1.23
LINC01002-222	ENST00000633151	MS4A1	P11836	297 aa		7.39	□□□□□ -1.23
LINC01002-222	ENST00000633151	NUTM1	Q86Y26	1132 aa		7.39	□□□□□ -1.23
LINC01002-222	ENST00000633151	SPIRE2	Q8WWL2	714 aa		7.39	□□□□□ -1.23
LINC01002-222	ENST00000633151	BCAN	Q96GW7	911 aa		7.39	□□□□□ -1.23
LINC01002-222	ENST00000633151	NRG2	O14511	850 aa	Predicted RBP	7.38	□□□□□ -1.23
LINC01002-222	ENST00000633151	MMP16	P51512	607 aa		7.38	□□□□□ -1.23
LINC01002-222	ENST00000633151	LAPTM4A	Q15012	233 aa		7.38	□□□□□ -1.23
LINC01002-222	ENST00000633151		Q6ZNB5	142 aa		7.38	□□□□□ -1.23
LINC01002-222	ENST00000633151	ZNF598	Q86UK7	904 aa	Known RBP	7.38	□□□□□ -1.23
LINC01002-222	ENST00000633151	USB1	Q9BQ65	265 aa	Known RBP	7.38	□□□□□ -1.23
LINC01002-222	ENST00000633151	PCDHGC3	Q9UN70	934 aa		7.38	□□□□□ -1.23
LINC01002-222	ENST00000633151	DXO	O77932	396 aa	Known RBP	7.37	□□□□□ -1.23
LINC01002-222	ENST00000633151	ZNF697	Q5TEC3	545 aa		7.37	□□□□□ -1.23
LINC01002-222	ENST00000633151	SYMPK	Q92797	1274 aa	Known RBP	7.37	□□□□□ -1.23
LINC01002-222	ENST00000633151	BEGAIN	Q9BUH8	593 aa		7.37	□□□□□ -1.23
LINC01002-222	ENST00000633151	PDZRN3	Q9UPQ7	1066 aa		7.37	□□□□□ -1.23
LINC01002-222	ENST00000633151	MOXD2P	A6NHM9	499 aa		7.36	□□□□□ -1.23
LINC01002-222	ENST00000633151	PDE4D	Q08499	809 aa		7.36	□□□□□ -1.23
LINC01002-222	ENST00000633151	FDX1	P10109	184 aa		7.35	□□□□□ -1.23
LINC01002-222	ENST00000633151	NDUFV2	P19404	249 aa		7.35	□□□□□ -1.23
LINC01002-222	ENST00000633151	GDF9	O60383	454 aa		7.34	□□□□□ -1.23
LINC01002-222	ENST00000633151	RPIA	P49247	311 aa		7.34	□□□□□ -1.23
LINC01002-222	ENST00000633151	PRR20E	P86478	221 aa		7.34	□□□□□ -1.23
LINC01002-222	ENST00000633151	PRR20C	P86479	221 aa		7.34	□□□□□ -1.23
LINC01002-222	ENST00000633151	PRR20D	P86480	221 aa		7.34	□□□□□ -1.23
LINC01002-222	ENST00000633151	PRR20B	P86481	221 aa		7.34	□□□□□ -1.23
LINC01002-222	ENST00000633151	PRR20A	P86496	221 aa		7.34	□□□□□ -1.23
LINC01002-222	ENST00000633151	CCER2	I3L3R5	266 aa		7.33	□□□□□ -1.24
LINC01002-222	ENST00000633151	NEFL	P07196	543 aa		7.33	□□□□□ -1.24
LINC01002-222	ENST00000633151	JUND	P17535	347 aa		7.33	□□□□□ -1.24
LINC01002-222	ENST00000633151	RETREG3	Q86VR2	466 aa		7.33	□□□□□ -1.24
LINC01002-222	ENST00000633151	TBC1D2	Q9BYX2	928 aa		7.33	□□□□□ -1.24
LINC01002-222	ENST00000633151	PKD2L1	Q9P0L9	805 aa		7.33	□□□□□ -1.24
LINC01002-222	ENST00000633151	TIMELESS	Q9UNS1	1208 aa		7.33	□□□□□ -1.24
LINC01002-222	ENST00000633151	TNFRSF10A	O00220	468 aa		7.32	□□□□□ -1.24
LINC01002-222	ENST00000633151	RSBN1L	Q6PCB5	846 aa	Predicted RBP	7.32	□□□□□ -1.24
LINC01002-222	ENST00000633151	LOC100996750	A0A140TA64	210 aa		7.31	□□□□□ -1.24
LINC01002-222	ENST00000633151	C6orf229	H3BNL8	230 aa		7.31	□□□□□ -1.24
LINC01002-222	ENST00000633151	KRTAP4-6	Q9BYQ5	205 aa		7.31	□□□□□ -1.24
LINC01002-222	ENST00000633151	TRIM32	Q13049	653 aa		7.3	□□□□□ -1.24
LINC01002-222	ENST00000633151	EIF4G1	Q04637	1599 aa	Known RBP	7.29	□□□□□ -1.24
LINC01002-222	ENST00000633151	GJA5	P36382	358 aa		7.29	□□□□□ -1.24
LINC01002-222	ENST00000633151	CUX2	O14529	1486 aa		7.29	□□□□□ -1.24
LINC01002-222	ENST00000633151	GOLGA3	Q08378	1498 aa		7.29	□□□□□ -1.24
LINC01002-222	ENST00000633151	SPTLC1	O15269	473 aa		7.28	□□□□□ -1.24
LINC01002-222	ENST00000633151	FOXC1	Q12948	553 aa		7.28	□□□□□ -1.24
LINC01002-222	ENST00000633151	MTMR2	Q13614	643 aa		7.28	□□□□□ -1.24
LINC01002-222	ENST00000633151	DIXDC1	Q155Q3	683 aa		7.28	□□□□□ -1.24
LINC01002-222	ENST00000633151	TRAF7	Q6Q0C0	670 aa		7.28	□□□□□ -1.24
LINC01002-222	ENST00000633151	PCDHB15	Q9Y5E8	787 aa		7.28	□□□□□ -1.24
LINC01002-222	ENST00000633151	ZBTB24	O43167	697 aa	Predicted RBP	7.27	□□□□□ -1.25
LINC01002-222	ENST00000633151	CD2BP2	O95400	341 aa	Known RBP	7.27	□□□□□ -1.25
LINC01002-222	ENST00000633151	MYSM1	Q5VVJ2	828 aa		7.27	□□□□□ -1.25
LINC01002-222	ENST00000633151	CCDC24	Q8N4L8	307 aa		7.27	□□□□□ -1.25
LINC01002-222	ENST00000633151	PRR7	Q8TB68	274 aa		7.27	□□□□□ -1.25
LINC01002-222	ENST00000633151	NUDT12	Q9BQG2	462 aa		7.27	□□□□□ -1.25
LINC01002-222	ENST00000633151	LIMD1	Q9UGP4	676 aa		7.27	□□□□□ -1.25
LINC01002-222	ENST00000633151	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.27	□□□□□ -1.25
LINC01002-222	ENST00000633151	DHX57	Q6P158	1386 aa	Known RBP	7.27	□□□□□ -1.25
LINC01002-222	ENST00000633151	FAM187A	A6NFU0	413 aa		7.25	□□□□□ -1.25
LINC01002-222	ENST00000633151	CFAP99	D6REC4	459 aa		7.25	□□□□□ -1.25
LINC01002-222	ENST00000633151	PTPRN	Q16849	979 aa		7.25	□□□□□ -1.25
LINC01002-222	ENST00000633151	PTCRA	Q6ISU1	281 aa	Predicted RBP	7.25	□□□□□ -1.25
LINC01002-222	ENST00000633151	RIC3	Q7Z5B4	369 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms