RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 NFKBIBQ15653 356 aa23.24■■□□□ 1.31
CCNL1-226ENST00000631619 BCAR3O75815 825 aa23.24■■□□□ 1.31
CCNL1-226ENST00000631619 CFAP74Q9C0B2 1584 aa23.24■■□□□ 1.31
CCNL1-226ENST00000631619 HECW2Q9P2P5 1572 aa23.24■■□□□ 1.31
CCNL1-226ENST00000631619 SHPRHQ149N8 1683 aa23.23■■□□□ 1.31
CCNL1-226ENST00000631619 NGEFQ8N5V2 710 aa23.23■■□□□ 1.31
CCNL1-226ENST00000631619 SLC12A5Q9H2X9 1139 aa23.23■■□□□ 1.31
CCNL1-226ENST00000631619 TMEM132EQ6IEE7 984 aa23.22■■□□□ 1.31
CCNL1-226ENST00000631619 UBE2Q2Q8WVN8 375 aa23.22■■□□□ 1.31
CCNL1-226ENST00000631619 NPM1P06748 294 aaKnown RBP eCLIP23.21■■□□□ 1.31
CCNL1-226ENST00000631619 ABCC3O15438 1527 aa23.21■■□□□ 1.31
CCNL1-226ENST00000631619 MORC1Q86VD1 984 aa23.19■■□□□ 1.3
CCNL1-226ENST00000631619 WWC1Q8IX03 1113 aa23.19■■□□□ 1.3
CCNL1-226ENST00000631619 SIGLEC1Q9BZZ2 1709 aa23.18■■□□□ 1.3
CCNL1-226ENST00000631619 RPGRIP1LQ68CZ1 1315 aa23.18■■□□□ 1.3
CCNL1-226ENST00000631619 TNNT2P45379 298 aaPredicted RBP23.17■■□□□ 1.3
CCNL1-226ENST00000631619 FRAT1Q92837 279 aaPredicted RBP23.17■■□□□ 1.3
CCNL1-226ENST00000631619 CAMSAP1Q5T5Y3 1602 aa23.16■■□□□ 1.3
CCNL1-226ENST00000631619 USP32Q8NFA0 1604 aa23.16■■□□□ 1.3
CCNL1-226ENST00000631619 DAXXQ9UER7 740 aaPredicted RBP23.15■■□□□ 1.3
CCNL1-226ENST00000631619 GLI2P10070 1586 aa23.15■■□□□ 1.3
CCNL1-226ENST00000631619 PIK3C2BO00750 1634 aa23.14■■□□□ 1.29
CCNL1-226ENST00000631619 C8orf34Q49A92 452 aa23.14■■□□□ 1.29
CCNL1-226ENST00000631619 ARHGEF28Q8N1W1 1705 aaKnown RBP23.12■■□□□ 1.29
CCNL1-226ENST00000631619 FAM161AQ3B820 660 aa23.12■■□□□ 1.29
CCNL1-226ENST00000631619 IQSEC2Q5JU85 1478 aa23.12■■□□□ 1.29
CCNL1-226ENST00000631619 NUTM2DQ5VT03 806 aaPredicted RBP23.11■■□□□ 1.29
CCNL1-226ENST00000631619 RUNDC1Q96C34 613 aa23.11■■□□□ 1.29
CCNL1-226ENST00000631619 NEXMIFQ5QGS0 1516 aa23.11■■□□□ 1.29
CCNL1-226ENST00000631619 TULP4Q9NRJ4 1543 aa23.11■■□□□ 1.29
CCNL1-226ENST00000631619 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
CCNL1-226ENST00000631619 RAPGEF3O95398 923 aa23.1■■□□□ 1.29
CCNL1-226ENST00000631619 PDE3AQ14432 1141 aa23.1■■□□□ 1.29
CCNL1-226ENST00000631619 NEUROD2Q15784 382 aa23.1■■□□□ 1.29
CCNL1-226ENST00000631619 RRP7AQ9Y3A4 280 aaKnown RBP23.1■■□□□ 1.29
CCNL1-226ENST00000631619 RGS3P49796 1198 aa23.09■■□□□ 1.29
CCNL1-226ENST00000631619 MTHFSP49914 203 aa23.09■■□□□ 1.29
CCNL1-226ENST00000631619 SLC4A3P48751 1232 aa23.09■■□□□ 1.29
CCNL1-226ENST00000631619 TCP11L2Q8N4U5 519 aa23.09■■□□□ 1.29
CCNL1-226ENST00000631619 PHF23Q9BUL5 403 aaPredicted RBP23.09■■□□□ 1.29
CCNL1-226ENST00000631619 IGHDP01880 384 aa23.07■■□□□ 1.28
CCNL1-226ENST00000631619 CYB5RLQ6IPT4 315 aa23.07■■□□□ 1.28
CCNL1-226ENST00000631619 EVC2Q86UK5 1308 aa23.07■■□□□ 1.28
CCNL1-226ENST00000631619 VGFO15240 615 aaPredicted RBP23.07■■□□□ 1.28
CCNL1-226ENST00000631619 PUS7Q96PZ0 661 aaKnown RBP23.07■■□□□ 1.28
CCNL1-226ENST00000631619 NINLQ9Y2I6 1382 aa23.07■■□□□ 1.28
CCNL1-226ENST00000631619 DIP2CQ9Y2E4 1556 aa23.07■■□□□ 1.28
CCNL1-226ENST00000631619 ANKRD36BQ8N2N9 1353 aa23.06■■□□□ 1.28
CCNL1-226ENST00000631619 NEO1Q92859 1461 aa23.05■■□□□ 1.28
CCNL1-226ENST00000631619 PANK1Q8TE04 598 aa23.05■■□□□ 1.28
CCNL1-226ENST00000631619 COG6Q9Y2V7 657 aa23.04■■□□□ 1.28
CCNL1-226ENST00000631619 CANXP27824 592 aaKnown RBP23.03■■□□□ 1.28
CCNL1-226ENST00000631619 CLUAP1Q96AJ1 413 aa23.03■■□□□ 1.28
CCNL1-226ENST00000631619 RARSP54136 660 aaKnown RBP23.02■■□□□ 1.28
CCNL1-226ENST00000631619 FAM43AQ8N2R8 423 aa23.02■■□□□ 1.28
CCNL1-226ENST00000631619 CFAP53Q96M91 514 aa23.02■■□□□ 1.28
CCNL1-226ENST00000631619 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
CCNL1-226ENST00000631619 ARHGAP31Q2M1Z3 1444 aa23.02■■□□□ 1.28
CCNL1-226ENST00000631619 EIF5BO60841 1220 aaKnown RBP23.02■■□□□ 1.28
CCNL1-226ENST00000631619 IDI1Q13907 227 aa23.02■■□□□ 1.28
CCNL1-226ENST00000631619 WDR63Q8IWG1 891 aa23.02■■□□□ 1.28
CCNL1-226ENST00000631619 NSD2O96028 1365 aa23.01■■□□□ 1.27
CCNL1-226ENST00000631619 RIMBP3CA6NJZ7 1639 aa23.01■■□□□ 1.27
CCNL1-226ENST00000631619 RIMBP3BA6NNM3 1639 aa23.01■■□□□ 1.27
CCNL1-226ENST00000631619 RIMBP3Q9UFD9 1639 aa23.01■■□□□ 1.27
CCNL1-226ENST00000631619 CCDC27Q2M243 656 aa23■■□□□ 1.27
CCNL1-226ENST00000631619 RSPH6AQ9H0K4 717 aa23■■□□□ 1.27
CCNL1-226ENST00000631619 MYO5BQ9ULV0 1848 aa23■■□□□ 1.27
CCNL1-226ENST00000631619 VIRMAQ69YN4 1812 aaKnown RBP22.99■■□□□ 1.27
CCNL1-226ENST00000631619 FRAT2O75474 233 aaPredicted RBP22.99■■□□□ 1.27
CCNL1-226ENST00000631619 SAFB2Q14151 953 aaKnown RBP eCLIP22.99■■□□□ 1.27
CCNL1-226ENST00000631619 RICTORQ6R327 1708 aa22.99■■□□□ 1.27
CCNL1-226ENST00000631619 ZFYVE9O95405 1425 aa22.97■■□□□ 1.27
CCNL1-226ENST00000631619 A0A1W2PP64 1363 aa22.96■■□□□ 1.27
CCNL1-226ENST00000631619 RLBP1P12271 317 aa22.96■■□□□ 1.27
CCNL1-226ENST00000631619 TNNQ9UQP3 1299 aa22.96■■□□□ 1.27
CCNL1-226ENST00000631619 ADGRB2O60241 1585 aa22.95■■□□□ 1.26
CCNL1-226ENST00000631619 U2AF1L5P0DN76 240 aaPredicted RBP22.95■■□□□ 1.26
CCNL1-226ENST00000631619 U2AF1Q01081 240 aaKnown RBP eCLIP22.95■■□□□ 1.263e-15■■■■□ 23.4
CCNL1-226ENST00000631619 ABCC11Q96J66 1382 aa22.94■■□□□ 1.26
CCNL1-226ENST00000631619 YEATS2Q9ULM3 1422 aa22.94■■□□□ 1.26
CCNL1-226ENST00000631619 NCBP3Q53F19 620 aaKnown RBP22.94■■□□□ 1.26
CCNL1-226ENST00000631619 BCL2L13Q9BXK5 485 aa22.94■■□□□ 1.26
CCNL1-226ENST00000631619 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
CCNL1-226ENST00000631619 SLC52A1Q9NWF4 448 aa22.94■■□□□ 1.26
CCNL1-226ENST00000631619 STK26Q9P289 416 aa22.94■■□□□ 1.26
CCNL1-226ENST00000631619 TMEM131LA2VDJ0 1609 aa22.92■■□□□ 1.26
CCNL1-226ENST00000631619 PREX1Q8TCU6 1659 aa22.91■■□□□ 1.26
CCNL1-226ENST00000631619 PTPRMP28827 1452 aa22.91■■□□□ 1.26
CCNL1-226ENST00000631619 SRPK2P78362 688 aaKnown RBP22.91■■□□□ 1.26
CCNL1-226ENST00000631619 MAPK8IP3Q9UPT6 1336 aa22.91■■□□□ 1.26
CCNL1-226ENST00000631619 MYH16Q9H6N6 1097 aa22.9■■□□□ 1.26
CCNL1-226ENST00000631619 PCDHB15Q9Y5E8 787 aa22.9■■□□□ 1.26
CCNL1-226ENST00000631619 AAMPQ13685 434 aa22.89■■□□□ 1.25
CCNL1-226ENST00000631619 GGNBP2Q9H3C7 697 aa22.89■■□□□ 1.25
CCNL1-226ENST00000631619 USP19O94966 1318 aa22.89■■□□□ 1.25
CCNL1-226ENST00000631619 COL3A1P02461 1466 aaPredicted RBP22.88■■□□□ 1.25
CCNL1-226ENST00000631619 PMFBP1Q8TBY8 1022 aa22.87■■□□□ 1.25
CCNL1-226ENST00000631619 PLEKHF1Q96S99 279 aa22.87■■□□□ 1.25
CCNL1-226ENST00000631619 CD163L1Q9NR16 1453 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms