RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 PDZRN3Q9UPQ7 1066 aa20.56■□□□□ 0.88
NRXN1-229ENST00000628515 PCDHB15Q9Y5E8 787 aa20.56■□□□□ 0.88
NRXN1-229ENST00000628515 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
NRXN1-229ENST00000628515 RLBP1P12271 317 aa20.55■□□□□ 0.88
NRXN1-229ENST00000628515 RRAGDQ9NQL2 400 aaPredicted RBP20.55■□□□□ 0.88
NRXN1-229ENST00000628515 STAG3Q9UJ98 1225 aa20.55■□□□□ 0.88
NRXN1-229ENST00000628515 EIF2AK4Q9P2K8 1649 aaKnown RBP20.55■□□□□ 0.88
NRXN1-229ENST00000628515 TBC1D2Q9BYX2 928 aa20.55■□□□□ 0.88
NRXN1-229ENST00000628515 KIDINS220Q9ULH0 1771 aa20.55■□□□□ 0.88
NRXN1-229ENST00000628515 MFAP1P55081 439 aaKnown RBP20.53■□□□□ 0.88
NRXN1-229ENST00000628515 PIK3C2GO75747 1445 aa20.53■□□□□ 0.88
NRXN1-229ENST00000628515 L1TD1Q5T7N2 865 aaKnown RBP20.53■□□□□ 0.88
NRXN1-229ENST00000628515 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
NRXN1-229ENST00000628515 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
NRXN1-229ENST00000628515 MORC1Q86VD1 984 aa20.51■□□□□ 0.87
NRXN1-229ENST00000628515 PMFBP1Q8TBY8 1022 aa20.51■□□□□ 0.87
NRXN1-229ENST00000628515 NAP1L5Q96NT1 182 aaPredicted RBP20.5■□□□□ 0.87
NRXN1-229ENST00000628515 ARAP3Q8WWN8 1544 aa20.5■□□□□ 0.87
NRXN1-229ENST00000628515 RARSP54136 660 aaKnown RBP20.5■□□□□ 0.87
NRXN1-229ENST00000628515 IDI1Q13907 227 aa20.5■□□□□ 0.87
NRXN1-229ENST00000628515 TCP11L2Q8N4U5 519 aa20.5■□□□□ 0.87
NRXN1-229ENST00000628515 PANK2Q9BZ23 570 aa20.5■□□□□ 0.87
NRXN1-229ENST00000628515 GOLGA6L3A6NEY3 463 aa20.49■□□□□ 0.87
NRXN1-229ENST00000628515 SCAF11Q99590 1463 aaKnown RBP20.48■□□□□ 0.87
NRXN1-229ENST00000628515 TBC1D32Q96NH3 1257 aa20.48■□□□□ 0.87
NRXN1-229ENST00000628515 NPATQ14207 1427 aa20.48■□□□□ 0.87
NRXN1-229ENST00000628515 FTSJ3Q8IY81 847 aaKnown RBP20.48■□□□□ 0.87
NRXN1-229ENST00000628515 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
NRXN1-229ENST00000628515 NOS1P29475 1434 aa20.47■□□□□ 0.87
NRXN1-229ENST00000628515 LAMC1P11047 1609 aa20.47■□□□□ 0.87
NRXN1-229ENST00000628515 RWDD1Q9H446 243 aaPredicted RBP20.46■□□□□ 0.87
NRXN1-229ENST00000628515 ANTXR1Q9H6X2 564 aa20.46■□□□□ 0.87
NRXN1-229ENST00000628515 XRCC6P12956 609 aaKnown RBP eCLIP20.45■□□□□ 0.86
NRXN1-229ENST00000628515 CEP152O94986 1710 aa20.44■□□□□ 0.86
NRXN1-229ENST00000628515 ESF1Q9H501 851 aaKnown RBP20.43■□□□□ 0.86
NRXN1-229ENST00000628515 MCM4P33991 863 aa20.43■□□□□ 0.86
NRXN1-229ENST00000628515 SLC12A5Q9H2X9 1139 aa20.43■□□□□ 0.86
NRXN1-229ENST00000628515 RUNDC1Q96C34 613 aa20.42■□□□□ 0.86
NRXN1-229ENST00000628515 ABCA6Q8N139 1617 aa20.42■□□□□ 0.86
NRXN1-229ENST00000628515 C22orf23Q9BZE7 217 aa20.42■□□□□ 0.86
NRXN1-229ENST00000628515 SYNMO15061 1565 aa20.42■□□□□ 0.86
NRXN1-229ENST00000628515 FRMPD1Q5SYB0 1578 aa20.41■□□□□ 0.86
NRXN1-229ENST00000628515 TSR2Q969E8 191 aaKnown RBP20.41■□□□□ 0.86
NRXN1-229ENST00000628515 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
NRXN1-229ENST00000628515 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.86
NRXN1-229ENST00000628515 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
NRXN1-229ENST00000628515 HECW2Q9P2P5 1572 aa20.4■□□□□ 0.86
NRXN1-229ENST00000628515 MROH1Q8NDA8 1641 aa20.4■□□□□ 0.86
NRXN1-229ENST00000628515 PLEKHG5O94827 1062 aa20.4■□□□□ 0.86
NRXN1-229ENST00000628515 MTHFSP49914 203 aa20.4■□□□□ 0.86
NRXN1-229ENST00000628515 PTPRTO14522 1441 aa20.4■□□□□ 0.86
NRXN1-229ENST00000628515 TRAK2O60296 914 aa20.39■□□□□ 0.85
NRXN1-229ENST00000628515 ITPRIPQ8IWB1 547 aa20.39■□□□□ 0.85
NRXN1-229ENST00000628515 MLH3Q9UHC1 1453 aa20.39■□□□□ 0.85
NRXN1-229ENST00000628515 PPRC1Q5VV67 1664 aaKnown RBP20.39■□□□□ 0.85
NRXN1-229ENST00000628515 NLRP1Q9C000 1473 aa20.38■□□□□ 0.85
NRXN1-229ENST00000628515 TRPM2O94759 1503 aa20.38■□□□□ 0.85
NRXN1-229ENST00000628515 SMC4Q9NTJ3 1288 aa20.38■□□□□ 0.85
NRXN1-229ENST00000628515 FOXD4L1Q9NU39 408 aa20.38■□□□□ 0.85
NRXN1-229ENST00000628515 NINLQ9Y2I6 1382 aa20.38■□□□□ 0.85
NRXN1-229ENST00000628515 MADDQ8WXG6 1647 aa20.37■□□□□ 0.85
NRXN1-229ENST00000628515 SPHKAPQ2M3C7 1700 aa20.37■□□□□ 0.85
NRXN1-229ENST00000628515 RNF17Q9BXT8 1623 aaKnown RBP20.37■□□□□ 0.85
NRXN1-229ENST00000628515 CEBPAP49715 358 aaPredicted RBP20.37■□□□□ 0.85
NRXN1-229ENST00000628515 NEO1Q92859 1461 aa20.37■□□□□ 0.85
NRXN1-229ENST00000628515 HSCBQ8IWL3 235 aa20.36■□□□□ 0.85
NRXN1-229ENST00000628515 NSD3Q9BZ95 1437 aa20.36■□□□□ 0.85
NRXN1-229ENST00000628515 NPC1L1Q9UHC9 1359 aa20.36■□□□□ 0.85
NRXN1-229ENST00000628515 CHMP5Q9NZZ3 219 aa20.36■□□□□ 0.85
NRXN1-229ENST00000628515 NGEFQ8N5V2 710 aa20.36■□□□□ 0.85
NRXN1-229ENST00000628515 TET3O43151 1660 aa20.36■□□□□ 0.85
NRXN1-229ENST00000628515 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
NRXN1-229ENST00000628515 DZIP1LQ8IYY4 767 aaKnown RBP20.35■□□□□ 0.85
NRXN1-229ENST00000628515 MVPQ14764 893 aaKnown RBP20.35■□□□□ 0.85
NRXN1-229ENST00000628515 ZKSCAN2Q63HK3 967 aa20.35■□□□□ 0.85
NRXN1-229ENST00000628515 CFAP53Q96M91 514 aa20.34■□□□□ 0.85
NRXN1-229ENST00000628515 EFCAB6Q5THR3 1501 aa20.33■□□□□ 0.85
NRXN1-229ENST00000628515 IQGAP1P46940 1657 aa20.33■□□□□ 0.85
NRXN1-229ENST00000628515 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
NRXN1-229ENST00000628515 HSP90AA1P07900 732 aaKnown RBP20.32■□□□□ 0.84
NRXN1-229ENST00000628515 ERVK-7P63135 1459 aa20.32■□□□□ 0.84
NRXN1-229ENST00000628515 CABP2Q9NPB3 220 aa20.31■□□□□ 0.84
NRXN1-229ENST00000628515 MINK1Q8N4C8 1332 aaPredicted RBP20.31■□□□□ 0.84
NRXN1-229ENST00000628515 POLR3AO14802 1390 aaPredicted RBP20.31■□□□□ 0.84
NRXN1-229ENST00000628515 DEPDC5O75140 1603 aa20.31■□□□□ 0.84
NRXN1-229ENST00000628515 DIP2CQ9Y2E4 1556 aa20.31■□□□□ 0.84
NRXN1-229ENST00000628515 EXOSC9Q06265 439 aaKnown RBP20.31■□□□□ 0.84
NRXN1-229ENST00000628515 KDM5AP29375 1690 aaKnown RBP20.3■□□□□ 0.84
NRXN1-229ENST00000628515 MYOM1P52179 1685 aa20.3■□□□□ 0.84
NRXN1-229ENST00000628515 VIRMAQ69YN4 1812 aaKnown RBP20.3■□□□□ 0.84
NRXN1-229ENST00000628515 WDR63Q8IWG1 891 aa20.3■□□□□ 0.84
NRXN1-229ENST00000628515 ABCC3O15438 1527 aa20.3■□□□□ 0.84
NRXN1-229ENST00000628515 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
NRXN1-229ENST00000628515 LNPKQ9C0E8 428 aa20.29■□□□□ 0.84
NRXN1-229ENST00000628515 HSP90AB1P08238 724 aaKnown RBP20.29■□□□□ 0.84
NRXN1-229ENST00000628515 DIP2BQ9P265 1576 aa20.28■□□□□ 0.84
NRXN1-229ENST00000628515 VWDEQ8N2E2 1590 aa20.27■□□□□ 0.84
NRXN1-229ENST00000628515 VGFO15240 615 aaPredicted RBP20.27■□□□□ 0.84
NRXN1-229ENST00000628515 TRIM27P14373 513 aa20.27■□□□□ 0.84
NRXN1-229ENST00000628515 FSD2A1L4K1 749 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms