RNA–Protein interactions for RNA: ENST00000628360.1

TCF4-263, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-263ENST00000628360 NCOA3Q9Y6Q9 1424 aa12.16□□□□□ -0.46
TCF4-263ENST00000628360 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.16□□□□□ -0.46
TCF4-263ENST00000628360 NAIPQ13075 1403 aa12.15□□□□□ -0.46
TCF4-263ENST00000628360 RRBP1Q9P2E9 1410 aaKnown RBP12.15□□□□□ -0.46
TCF4-263ENST00000628360 BRINP3Q76B58 766 aa12.15□□□□□ -0.46
TCF4-263ENST00000628360 CLTCL1P53675 1640 aa12.13□□□□□ -0.47
TCF4-263ENST00000628360 COL16A1Q07092 1604 aaPredicted RBP12.13□□□□□ -0.47
TCF4-263ENST00000628360 DDX17Q92841 729 aaKnown RBP12.13□□□□□ -0.47
TCF4-263ENST00000628360 NRXN3Q9Y4C0 1643 aa12.12□□□□□ -0.47
TCF4-263ENST00000628360 C19orf67A6NJJ6 358 aa12.12□□□□□ -0.47
TCF4-263ENST00000628360 SETBP1Q9Y6X0 1596 aa12.12□□□□□ -0.47
TCF4-263ENST00000628360 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
TCF4-263ENST00000628360 LRP6O75581 1613 aa12.11□□□□□ -0.47
TCF4-263ENST00000628360 NEXMIFQ5QGS0 1516 aa12.1□□□□□ -0.47
TCF4-263ENST00000628360 XRN1Q8IZH2 1706 aaKnown RBP12.09□□□□□ -0.47
TCF4-263ENST00000628360 AHDC1Q5TGY3 1603 aaPredicted RBP12.09□□□□□ -0.47
TCF4-263ENST00000628360 VGFO15240 615 aaPredicted RBP12.09□□□□□ -0.47
TCF4-263ENST00000628360 HFM1A2PYH4 1435 aa12.09□□□□□ -0.47
TCF4-263ENST00000628360 MST1RQ04912 1400 aa12.09□□□□□ -0.47
TCF4-263ENST00000628360 ASXL1Q8IXJ9 1541 aa12.08□□□□□ -0.48
TCF4-263ENST00000628360 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
TCF4-263ENST00000628360 KIF1BO60333 1816 aa12.08□□□□□ -0.48
TCF4-263ENST00000628360 DCCP43146 1447 aa12.08□□□□□ -0.48
TCF4-263ENST00000628360 SETD1AO15047 1707 aaKnown RBP12.07□□□□□ -0.48
TCF4-263ENST00000628360 RGL3Q3MIN7 710 aa12.07□□□□□ -0.48
TCF4-263ENST00000628360 ADGRL3Q9HAR2 1447 aa12.07□□□□□ -0.48
TCF4-263ENST00000628360 ROBO2Q9HCK4 1378 aa12.06□□□□□ -0.48
TCF4-263ENST00000628360 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
TCF4-263ENST00000628360 LRRC59Q96AG4 307 aaKnown RBP12.06□□□□□ -0.48
TCF4-263ENST00000628360 C8orf37Q96NL8 207 aa12.05□□□□□ -0.48
TCF4-263ENST00000628360 ORAI2Q96SN7 254 aa12.05□□□□□ -0.48
TCF4-263ENST00000628360 STK26Q9P289 416 aa12.05□□□□□ -0.48
TCF4-263ENST00000628360 RPGRIP1LQ68CZ1 1315 aa12.05□□□□□ -0.48
TCF4-263ENST00000628360 SHPRHQ149N8 1683 aa12.04□□□□□ -0.48
TCF4-263ENST00000628360 ADAMTS2O95450 1211 aa12.04□□□□□ -0.48
TCF4-263ENST00000628360 RXRBP28702 533 aa12.04□□□□□ -0.48
TCF4-263ENST00000628360 AFF2P51816 1311 aa12.04□□□□□ -0.48
TCF4-263ENST00000628360 NALCNQ8IZF0 1738 aa12.03□□□□□ -0.48
TCF4-263ENST00000628360 ADGRF5Q8IZF2 1346 aa12.03□□□□□ -0.48
TCF4-263ENST00000628360 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
TCF4-263ENST00000628360 C1orf167Q5SNV9 1468 aa12.02□□□□□ -0.48
TCF4-263ENST00000628360 NUTM2FA1L443 756 aa12.02□□□□□ -0.49
TCF4-263ENST00000628360 MPHOSPH9Q99550 1183 aa12.02□□□□□ -0.49
TCF4-263ENST00000628360 CCDC144AA2RUR9 1427 aa12.02□□□□□ -0.49
TCF4-263ENST00000628360 ESCO1Q5FWF5 840 aa12.01□□□□□ -0.49
TCF4-263ENST00000628360 NGLY1Q96IV0 654 aa12.01□□□□□ -0.49
TCF4-263ENST00000628360 PNPLA6Q8IY17 1366 aa12.01□□□□□ -0.49
TCF4-263ENST00000628360 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
TCF4-263ENST00000628360 XPCQ01831 940 aaPredicted RBP12□□□□□ -0.49
TCF4-263ENST00000628360 TMEM132EQ6IEE7 984 aa12□□□□□ -0.49
TCF4-263ENST00000628360 WAPLQ7Z5K2 1190 aa12□□□□□ -0.49
TCF4-263ENST00000628360 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
TCF4-263ENST00000628360 GABBR2O75899 941 aa11.99□□□□□ -0.49
TCF4-263ENST00000628360 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
TCF4-263ENST00000628360 QTRT2Q9H974 415 aaKnown RBP11.99□□□□□ -0.49
TCF4-263ENST00000628360 PPLO60437 1756 aa11.99□□□□□ -0.49
TCF4-263ENST00000628360 UPF1Q92900 1129 aaKnown RBP eCLIP11.98□□□□□ -0.49
TCF4-263ENST00000628360 FOXO3O43524 673 aa11.97□□□□□ -0.49
TCF4-263ENST00000628360 SOS2Q07890 1332 aaPredicted RBP11.96□□□□□ -0.49
TCF4-263ENST00000628360 SPATA31E1Q6ZUB1 1445 aa11.95□□□□□ -0.5
TCF4-263ENST00000628360 PLEKHH1Q9ULM0 1364 aa11.95□□□□□ -0.5
TCF4-263ENST00000628360 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
TCF4-263ENST00000628360 RBM6P78332 1123 aaKnown RBP11.95□□□□□ -0.5
TCF4-263ENST00000628360 ANKRD30BQ9BXX2 1392 aa11.94□□□□□ -0.5
TCF4-263ENST00000628360 SAFB2Q14151 953 aaKnown RBP eCLIP11.94□□□□□ -0.5
TCF4-263ENST00000628360 USP21Q9UK80 565 aa11.94□□□□□ -0.5
TCF4-263ENST00000628360 LRPPRCP42704 1394 aaKnown RBP11.93□□□□□ -0.5
TCF4-263ENST00000628360 NPHP3Q7Z494 1330 aa11.93□□□□□ -0.5
TCF4-263ENST00000628360 RGS12O14924 1447 aa11.93□□□□□ -0.5
TCF4-263ENST00000628360 CFAP70Q5T0N1 1121 aa11.92□□□□□ -0.5
TCF4-263ENST00000628360 PRAG1Q86YV5 1406 aa11.92□□□□□ -0.5
TCF4-263ENST00000628360 PIK3C2GO75747 1445 aa11.91□□□□□ -0.5
TCF4-263ENST00000628360 YTHDC2Q9H6S0 1430 aaKnown RBP11.91□□□□□ -0.5
TCF4-263ENST00000628360 CDC42BPGQ6DT37 1551 aa11.91□□□□□ -0.5
TCF4-263ENST00000628360 ABCC11Q96J66 1382 aa11.91□□□□□ -0.5
TCF4-263ENST00000628360 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
TCF4-263ENST00000628360 C14orf93Q9H972 538 aaKnown RBP11.9□□□□□ -0.5
TCF4-263ENST00000628360 TRPC5Q9UL62 973 aaPredicted RBP11.9□□□□□ -0.5
TCF4-263ENST00000628360 PRAM1Q96QH2 718 aa11.89□□□□□ -0.51
TCF4-263ENST00000628360 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
TCF4-263ENST00000628360 RAB3GAP2Q9H2M9 1393 aa11.89□□□□□ -0.51
TCF4-263ENST00000628360 LAMC1P11047 1609 aa11.89□□□□□ -0.51
TCF4-263ENST00000628360 PXDNQ92626 1479 aa11.89□□□□□ -0.51
TCF4-263ENST00000628360 TECPR2O15040 1411 aa11.88□□□□□ -0.51
TCF4-263ENST00000628360 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
TCF4-263ENST00000628360 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
TCF4-263ENST00000628360 KRT28Q7Z3Y7 464 aa11.88□□□□□ -0.51
TCF4-263ENST00000628360 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
TCF4-263ENST00000628360 POGKQ9P215 609 aa11.88□□□□□ -0.51
TCF4-263ENST00000628360 DHX57Q6P158 1386 aaKnown RBP11.88□□□□□ -0.51
TCF4-263ENST00000628360 IFT172Q9UG01 1749 aa11.88□□□□□ -0.51
TCF4-263ENST00000628360 MYOM2P54296 1465 aa11.87□□□□□ -0.51
TCF4-263ENST00000628360 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
TCF4-263ENST00000628360 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
TCF4-263ENST00000628360 PHF8Q9UPP1 1060 aa11.86□□□□□ -0.51
TCF4-263ENST00000628360 PMFBP1Q8TBY8 1022 aa11.85□□□□□ -0.51
TCF4-263ENST00000628360 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
TCF4-263ENST00000628360 COL22A1Q8NFW1 1626 aaPredicted RBP11.85□□□□□ -0.51
TCF4-263ENST00000628360 ATRNO75882 1429 aa11.85□□□□□ -0.51
TCF4-263ENST00000628360 SPATA31A3Q5VYP0 1347 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms