RNA–Protein interactions for RNA: ENST00000626733.1

CISTR-202, chondrogenesis-associated transcript, humanhuman

TSL 3 BASIC

Gene CISTR, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISTR-202ENST00000626733 PTPRUQ92729 1446 aa16.6■□□□□ 0.25
CISTR-202ENST00000626733 SBNO2Q9Y2G9 1366 aa16.58■□□□□ 0.24
CISTR-202ENST00000626733 NKTRP30414 1462 aaKnown RBP16.57■□□□□ 0.24
CISTR-202ENST00000626733 SIRT1Q96EB6 747 aa16.57■□□□□ 0.24
CISTR-202ENST00000626733 HSPA5P11021 654 aaKnown RBP16.56■□□□□ 0.24
CISTR-202ENST00000626733 QRICH2Q9H0J4 1663 aa16.56■□□□□ 0.24
CISTR-202ENST00000626733 TMEM94Q12767 1356 aa16.55■□□□□ 0.24
CISTR-202ENST00000626733 TRAK1Q9UPV9 953 aa16.55■□□□□ 0.24
CISTR-202ENST00000626733 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
CISTR-202ENST00000626733 KCNA6P17658 529 aa16.54■□□□□ 0.24
CISTR-202ENST00000626733 STK26Q9P289 416 aa16.54■□□□□ 0.24
CISTR-202ENST00000626733 AMOTL2Q9Y2J4 779 aa16.54■□□□□ 0.24
CISTR-202ENST00000626733 ROBO2Q9HCK4 1378 aa16.53■□□□□ 0.24
CISTR-202ENST00000626733 ROBO1Q9Y6N7 1651 aa16.53■□□□□ 0.24
CISTR-202ENST00000626733 ST20-MTHFSA0A0A6YYL1 179 aa16.53■□□□□ 0.24
CISTR-202ENST00000626733 UPF1Q92900 1129 aaKnown RBP eCLIP16.52■□□□□ 0.24
CISTR-202ENST00000626733 SLC24A1O60721 1099 aa16.51■□□□□ 0.23
CISTR-202ENST00000626733 PRAM1Q96QH2 718 aa16.51■□□□□ 0.23
CISTR-202ENST00000626733 TESK2Q96S53 571 aa16.51■□□□□ 0.23
CISTR-202ENST00000626733 ADGRB2O60241 1585 aa16.51■□□□□ 0.23
CISTR-202ENST00000626733 PROSER2Q86WR7 435 aaPredicted RBP16.49■□□□□ 0.23
CISTR-202ENST00000626733 POGKQ9P215 609 aa16.49■□□□□ 0.23
CISTR-202ENST00000626733 PLEKHH1Q9ULM0 1364 aa16.49■□□□□ 0.23
CISTR-202ENST00000626733 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.47■□□□□ 0.23
CISTR-202ENST00000626733 NCOA3Q9Y6Q9 1424 aa16.46■□□□□ 0.23
CISTR-202ENST00000626733 WAPLQ7Z5K2 1190 aa16.46■□□□□ 0.23
CISTR-202ENST00000626733 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
CISTR-202ENST00000626733 LRP6O75581 1613 aa16.45■□□□□ 0.22
CISTR-202ENST00000626733 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
CISTR-202ENST00000626733 SLAIN2Q9P270 581 aa16.45■□□□□ 0.22
CISTR-202ENST00000626733 NALCNQ8IZF0 1738 aa16.45■□□□□ 0.22
CISTR-202ENST00000626733 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
CISTR-202ENST00000626733 CDC42BPGQ6DT37 1551 aa16.44■□□□□ 0.22
CISTR-202ENST00000626733 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
CISTR-202ENST00000626733 TMF1P82094 1093 aa16.44■□□□□ 0.22
CISTR-202ENST00000626733 PHLPP1O60346 1717 aa16.42■□□□□ 0.22
CISTR-202ENST00000626733 JCADQ9P266 1359 aa16.42■□□□□ 0.22
CISTR-202ENST00000626733 SAFB2Q14151 953 aaKnown RBP eCLIP16.42■□□□□ 0.22
CISTR-202ENST00000626733 PUS7Q96PZ0 661 aaKnown RBP16.42■□□□□ 0.22
CISTR-202ENST00000626733 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
CISTR-202ENST00000626733 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
CISTR-202ENST00000626733 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
CISTR-202ENST00000626733 CCDC7Q96M83 1385 aa16.4■□□□□ 0.22
CISTR-202ENST00000626733 DCCP43146 1447 aa16.4■□□□□ 0.22
CISTR-202ENST00000626733 KIF7Q2M1P5 1343 aa16.39■□□□□ 0.21
CISTR-202ENST00000626733 COL16A1Q07092 1604 aaPredicted RBP16.38■□□□□ 0.21
CISTR-202ENST00000626733 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
CISTR-202ENST00000626733 WASLO00401 505 aaPredicted RBP16.38■□□□□ 0.21
CISTR-202ENST00000626733 FMN2Q9NZ56 1722 aa16.38■□□□□ 0.21
CISTR-202ENST00000626733 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
CISTR-202ENST00000626733 MSH6P52701 1360 aa16.37■□□□□ 0.21
CISTR-202ENST00000626733 ATAD2Q6PL18 1390 aa16.37■□□□□ 0.21
CISTR-202ENST00000626733 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
CISTR-202ENST00000626733 MYOM1P52179 1685 aa16.35■□□□□ 0.21
CISTR-202ENST00000626733 C19orf44Q9H6X5 657 aa16.35■□□□□ 0.21
CISTR-202ENST00000626733 NINLQ9Y2I6 1382 aa16.35■□□□□ 0.21
CISTR-202ENST00000626733 ATP7BP35670 1465 aa16.35■□□□□ 0.21
CISTR-202ENST00000626733 TOPAZ1Q8N9V7 1692 aa16.34■□□□□ 0.21
CISTR-202ENST00000626733 MEX3CQ5U5Q3 659 aaKnown RBP16.34■□□□□ 0.21
CISTR-202ENST00000626733 ZNF772Q68DY9 489 aaPredicted RBP16.34■□□□□ 0.21
CISTR-202ENST00000626733 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
CISTR-202ENST00000626733 USP32Q8NFA0 1604 aa16.34■□□□□ 0.21
CISTR-202ENST00000626733 RXRBP28702 533 aa16.33■□□□□ 0.2
CISTR-202ENST00000626733 C14orf37Q86TY3 774 aa16.33■□□□□ 0.2
CISTR-202ENST00000626733 ITSN1Q15811 1721 aa16.33■□□□□ 0.2
CISTR-202ENST00000626733 SRPK2P78362 688 aaKnown RBP16.32■□□□□ 0.2
CISTR-202ENST00000626733 SPATA31A6Q5VVP1 1343 aa16.32■□□□□ 0.2
CISTR-202ENST00000626733 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
CISTR-202ENST00000626733 NUTM2BA6NNL0 878 aaPredicted RBP16.3■□□□□ 0.2
CISTR-202ENST00000626733 NUTM2EB1AL46 878 aaPredicted RBP16.3■□□□□ 0.2
CISTR-202ENST00000626733 NUTM2AQ8IVF1 878 aaPredicted RBP16.3■□□□□ 0.2
CISTR-202ENST00000626733 PRR36Q9H6K5 1346 aa16.29■□□□□ 0.2
CISTR-202ENST00000626733 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
CISTR-202ENST00000626733 MST1RQ04912 1400 aa16.28■□□□□ 0.2
CISTR-202ENST00000626733 ATF3P18847 181 aa16.28■□□□□ 0.2
CISTR-202ENST00000626733 NUDT16Q96DE0 195 aaKnown RBP16.28■□□□□ 0.2
CISTR-202ENST00000626733 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
CISTR-202ENST00000626733 SRCAPQ6ZRS2 3230 aa16.26■□□□□ 0.19
CISTR-202ENST00000626733 RGPD8O14715 1765 aaPredicted RBP16.26■□□□□ 0.19
CISTR-202ENST00000626733 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
CISTR-202ENST00000626733 C1orf167Q5SNV9 1468 aa16.26■□□□□ 0.19
CISTR-202ENST00000626733 PPIP5K1Q6PFW1 1433 aa16.26■□□□□ 0.19
CISTR-202ENST00000626733 AFF2P51816 1311 aa16.25■□□□□ 0.19
CISTR-202ENST00000626733 KIF1AQ12756 1690 aa16.25■□□□□ 0.19
CISTR-202ENST00000626733 SHPRHQ149N8 1683 aa16.25■□□□□ 0.19
CISTR-202ENST00000626733 ANKRD36BQ8N2N9 1353 aa16.25■□□□□ 0.19
CISTR-202ENST00000626733 CD163L1Q9NR16 1453 aa16.24■□□□□ 0.19
CISTR-202ENST00000626733 AHDC1Q5TGY3 1603 aaPredicted RBP16.24■□□□□ 0.19
CISTR-202ENST00000626733 PLEKHG3A1L390 1219 aa16.24■□□□□ 0.19
CISTR-202ENST00000626733 AKAP12Q02952 1782 aa16.23■□□□□ 0.19
CISTR-202ENST00000626733 CPSF1Q10570 1443 aaKnown RBP16.23■□□□□ 0.19
CISTR-202ENST00000626733 BRINP3Q76B58 766 aa16.23■□□□□ 0.19
CISTR-202ENST00000626733 CDK12Q9NYV4 1490 aaPredicted RBP16.22■□□□□ 0.19
CISTR-202ENST00000626733 RGS12O14924 1447 aa16.22■□□□□ 0.19
CISTR-202ENST00000626733 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
CISTR-202ENST00000626733 POLR3AO14802 1390 aaPredicted RBP16.22■□□□□ 0.19
CISTR-202ENST00000626733 MON2Q7Z3U7 1717 aa16.22■□□□□ 0.19
CISTR-202ENST00000626733 NUTM2FA1L443 756 aa16.21■□□□□ 0.19
CISTR-202ENST00000626733 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.19
CISTR-202ENST00000626733 TMC1Q8TDI8 760 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms