RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 TECPR2O15040 1411 aa15.9■□□□□ 0.14
CCDC163-201ENST00000625766 MED14O60244 1454 aa15.9■□□□□ 0.14
CCDC163-201ENST00000625766 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
CCDC163-201ENST00000625766 TBX22Q9Y458 520 aa15.9■□□□□ 0.14
CCDC163-201ENST00000625766 TULP4Q9NRJ4 1543 aa15.89■□□□□ 0.14
CCDC163-201ENST00000625766 SAFB2Q14151 953 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCDC163-201ENST00000625766 FAM135BQ49AJ0 1406 aa15.89■□□□□ 0.13
CCDC163-201ENST00000625766 CABP2Q9NPB3 220 aa15.88■□□□□ 0.13
CCDC163-201ENST00000625766 HNRNPUQ00839 825 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC163-201ENST00000625766 WAPLQ7Z5K2 1190 aa15.88■□□□□ 0.13
CCDC163-201ENST00000625766 BCANQ96GW7 911 aa15.88■□□□□ 0.13
CCDC163-201ENST00000625766 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
CCDC163-201ENST00000625766 MINK1Q8N4C8 1332 aaPredicted RBP15.87■□□□□ 0.13
CCDC163-201ENST00000625766 ATAD2Q6PL18 1390 aa15.87■□□□□ 0.13
CCDC163-201ENST00000625766 CDK19Q9BWU1 502 aa15.87■□□□□ 0.13
CCDC163-201ENST00000625766 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
CCDC163-201ENST00000625766 SETD1BQ9UPS6 1966 aaKnown RBP15.86■□□□□ 0.13
CCDC163-201ENST00000625766 SRPK2P78362 688 aaKnown RBP15.85■□□□□ 0.13
CCDC163-201ENST00000625766 PPP2R1AP30153 589 aa15.85■□□□□ 0.13
CCDC163-201ENST00000625766 ANKRD36BQ8N2N9 1353 aa15.85■□□□□ 0.13
CCDC163-201ENST00000625766 RIMS1Q86UR5 1692 aaKnown RBP15.84■□□□□ 0.13
CCDC163-201ENST00000625766 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.13
CCDC163-201ENST00000625766 PLEKHH1Q9ULM0 1364 aa15.83■□□□□ 0.13
CCDC163-201ENST00000625766 INSRP06213 1382 aa15.83■□□□□ 0.12
CCDC163-201ENST00000625766 WASLO00401 505 aaPredicted RBP15.82■□□□□ 0.12
CCDC163-201ENST00000625766 CEP170BQ9Y4F5 1589 aaPredicted RBP15.81■□□□□ 0.12
CCDC163-201ENST00000625766 ZBED9Q6R2W3 1325 aa15.81■□□□□ 0.12
CCDC163-201ENST00000625766 SLC26A8Q96RN1 970 aa15.81■□□□□ 0.12
CCDC163-201ENST00000625766 TERF2IPQ9NYB0 399 aa15.81■□□□□ 0.12
CCDC163-201ENST00000625766 KNDC1Q76NI1 1749 aa15.81■□□□□ 0.12
CCDC163-201ENST00000625766 NSD3Q9BZ95 1437 aa15.81■□□□□ 0.12
CCDC163-201ENST00000625766 ANKLE2Q86XL3 938 aa15.8■□□□□ 0.12
CCDC163-201ENST00000625766 CGNL1Q0VF96 1302 aa15.8■□□□□ 0.12
CCDC163-201ENST00000625766 CPS1P31327 1500 aa15.8■□□□□ 0.12
CCDC163-201ENST00000625766 ROBO2Q9HCK4 1378 aa15.79■□□□□ 0.12
CCDC163-201ENST00000625766 AMOTL2Q9Y2J4 779 aa15.79■□□□□ 0.12
CCDC163-201ENST00000625766 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
CCDC163-201ENST00000625766 CABP1Q9NZU7 370 aa15.78■□□□□ 0.12
CCDC163-201ENST00000625766 PTPRUQ92729 1446 aa15.78■□□□□ 0.12
CCDC163-201ENST00000625766 NSD2O96028 1365 aa15.78■□□□□ 0.12
CCDC163-201ENST00000625766 DIP2AQ14689 1571 aa15.77■□□□□ 0.12
CCDC163-201ENST00000625766 USP32Q8NFA0 1604 aa15.77■□□□□ 0.11
CCDC163-201ENST00000625766 HDGFL2Q7Z4V5 671 aaPredicted RBP15.76■□□□□ 0.11
CCDC163-201ENST00000625766 MORC1Q86VD1 984 aa15.76■□□□□ 0.11
CCDC163-201ENST00000625766 A0A1W2PP64 1363 aa15.76■□□□□ 0.11
CCDC163-201ENST00000625766 CD163L1Q9NR16 1453 aa15.76■□□□□ 0.11
CCDC163-201ENST00000625766 CCDC61Q9Y6R9 512 aa15.75■□□□□ 0.11
CCDC163-201ENST00000625766 ZNF142P52746 1687 aaPredicted RBP15.74■□□□□ 0.11
CCDC163-201ENST00000625766 NUDT16Q96DE0 195 aaKnown RBP15.74■□□□□ 0.11
CCDC163-201ENST00000625766 PTCH1Q13635 1447 aa15.73■□□□□ 0.11
CCDC163-201ENST00000625766 ATP7BP35670 1465 aa15.72■□□□□ 0.11
CCDC163-201ENST00000625766 POLR3AO14802 1390 aaPredicted RBP15.72■□□□□ 0.11
CCDC163-201ENST00000625766 FYB1O15117 783 aa15.72■□□□□ 0.11
CCDC163-201ENST00000625766 CPSF1Q10570 1443 aaKnown RBP15.71■□□□□ 0.11
CCDC163-201ENST00000625766 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
CCDC163-201ENST00000625766 ADAMTS8Q9UP79 889 aa15.71■□□□□ 0.1
CCDC163-201ENST00000625766 ADGRB2O60241 1585 aa15.7■□□□□ 0.1
CCDC163-201ENST00000625766 PLEKHG3A1L390 1219 aa15.69■□□□□ 0.1
CCDC163-201ENST00000625766 BLMP54132 1417 aaPredicted RBP15.69■□□□□ 0.1
CCDC163-201ENST00000625766 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
CCDC163-201ENST00000625766 WDR43Q15061 677 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCDC163-201ENST00000625766 PPIP5K1Q6PFW1 1433 aa15.68■□□□□ 0.1
CCDC163-201ENST00000625766 KCNA6P17658 529 aa15.67■□□□□ 0.1
CCDC163-201ENST00000625766 PRR36Q9H6K5 1346 aa15.67■□□□□ 0.1
CCDC163-201ENST00000625766 MTHFSP49914 203 aa15.66■□□□□ 0.1
CCDC163-201ENST00000625766 GGNBP2Q9H3C7 697 aa15.66■□□□□ 0.1
CCDC163-201ENST00000625766 XRN1Q8IZH2 1706 aaKnown RBP15.65■□□□□ 0.1
CCDC163-201ENST00000625766 PDE3BQ13370 1112 aa15.65■□□□□ 0.1
CCDC163-201ENST00000625766 EDC4Q6P2E9 1401 aaKnown RBP15.65■□□□□ 0.1
CCDC163-201ENST00000625766 NPHP4O75161 1426 aaPredicted RBP15.64■□□□□ 0.09
CCDC163-201ENST00000625766 NCKAP5LQ9HCH0 1330 aa15.63■□□□□ 0.09
CCDC163-201ENST00000625766 TNNT2P45379 298 aaPredicted RBP15.63■□□□□ 0.09
CCDC163-201ENST00000625766 SMG6Q86US8 1419 aaKnown RBP15.63■□□□□ 0.09
CCDC163-201ENST00000625766 CFAP53Q96M91 514 aa15.63■□□□□ 0.09
CCDC163-201ENST00000625766 CDC42BPGQ6DT37 1551 aa15.61■□□□□ 0.09
CCDC163-201ENST00000625766 NGEFQ8N5V2 710 aa15.61■□□□□ 0.09
CCDC163-201ENST00000625766 NUDCQ9Y266 331 aa15.61■□□□□ 0.09
CCDC163-201ENST00000625766 CHD2O14647 1828 aaKnown RBP15.61■□□□□ 0.09
CCDC163-201ENST00000625766 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.6■□□□□ 0.09
CCDC163-201ENST00000625766 ACEP12821 1306 aa15.6■□□□□ 0.09
CCDC163-201ENST00000625766 ANKARQ7Z5J8 1434 aa15.59■□□□□ 0.09
CCDC163-201ENST00000625766 PNPLA6Q8IY17 1366 aa15.58■□□□□ 0.09
CCDC163-201ENST00000625766 SUPT16HQ9Y5B9 1047 aaKnown RBP15.58■□□□□ 0.09
CCDC163-201ENST00000625766 KDM4FA0A1W2PPD8 638 aa15.57■□□□□ 0.08
CCDC163-201ENST00000625766 ANKRD26Q9UPS8 1709 aa15.57■□□□□ 0.08
CCDC163-201ENST00000625766 TTC21BQ7Z4L5 1316 aa15.57■□□□□ 0.08
CCDC163-201ENST00000625766 AATKQ6ZMQ8 1374 aa15.57■□□□□ 0.08
CCDC163-201ENST00000625766 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
CCDC163-201ENST00000625766 SSH2Q76I76 1423 aa15.56■□□□□ 0.08
CCDC163-201ENST00000625766 NME9Q86XW9 330 aa15.56■□□□□ 0.08
CCDC163-201ENST00000625766 POLKQ9UBT6 870 aa15.56■□□□□ 0.08
CCDC163-201ENST00000625766 TOPAZ1Q8N9V7 1692 aa15.56■□□□□ 0.08
CCDC163-201ENST00000625766 ZNF521Q96K83 1311 aa15.56■□□□□ 0.08
CCDC163-201ENST00000625766 NUTM2FA1L443 756 aa15.55■□□□□ 0.08
CCDC163-201ENST00000625766 COG3Q96JB2 828 aa15.55■□□□□ 0.08
CCDC163-201ENST00000625766 MON2Q7Z3U7 1717 aa15.55■□□□□ 0.08
CCDC163-201ENST00000625766 NEFLP07196 543 aa15.55■□□□□ 0.08
CCDC163-201ENST00000625766 AKAP12Q02952 1782 aa15.55■□□□□ 0.08
CCDC163-201ENST00000625766 USP6P35125 1406 aa15.54■□□□□ 0.08
CCDC163-201ENST00000625766 SENP3-EIF4A1A0A087X0R7 540 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms