RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
LINC00963-220ENST00000625171 METP08581 1390 aa16.28■□□□□ 0.2
LINC00963-220ENST00000625171 ARHGEF28Q8N1W1 1705 aaKnown RBP16.27■□□□□ 0.19
LINC00963-220ENST00000625171 MIER1Q8N108 512 aa16.25■□□□□ 0.19
LINC00963-220ENST00000625171 STRCP1A6NGW2 1772 aa16.25■□□□□ 0.19
LINC00963-220ENST00000625171 KNDC1Q76NI1 1749 aa16.24■□□□□ 0.19
LINC00963-220ENST00000625171 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
LINC00963-220ENST00000625171 PER1O15534 1290 aaPredicted RBP16.23■□□□□ 0.19
LINC00963-220ENST00000625171 ANP32CO43423 234 aa16.22■□□□□ 0.19
LINC00963-220ENST00000625171 CCER2I3L3R5 266 aa16.21■□□□□ 0.19
LINC00963-220ENST00000625171 PRAM1Q96QH2 718 aa16.21■□□□□ 0.19
LINC00963-220ENST00000625171 KTN1Q86UP2 1357 aaKnown RBP16.21■□□□□ 0.19
LINC00963-220ENST00000625171 QRICH2Q9H0J4 1663 aa16.21■□□□□ 0.18
LINC00963-220ENST00000625171 BCANQ96GW7 911 aa16.2■□□□□ 0.18
LINC00963-220ENST00000625171 POGKQ9P215 609 aa16.2■□□□□ 0.18
LINC00963-220ENST00000625171 STK26Q9P289 416 aa16.2■□□□□ 0.18
LINC00963-220ENST00000625171 NINLQ9Y2I6 1382 aa16.2■□□□□ 0.18
LINC00963-220ENST00000625171 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
LINC00963-220ENST00000625171 PTPRUQ92729 1446 aa16.19■□□□□ 0.18
LINC00963-220ENST00000625171 SLC26A8Q96RN1 970 aa16.18■□□□□ 0.18
LINC00963-220ENST00000625171 RGS17Q9UGC6 210 aaPredicted RBP16.18■□□□□ 0.18
LINC00963-220ENST00000625171 NPC1L1Q9UHC9 1359 aa16.17■□□□□ 0.18
LINC00963-220ENST00000625171 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
LINC00963-220ENST00000625171 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
LINC00963-220ENST00000625171 TULP4Q9NRJ4 1543 aa16.16■□□□□ 0.18
LINC00963-220ENST00000625171 PRKRIP1Q9H875 184 aaPredicted RBP16.16■□□□□ 0.18
LINC00963-220ENST00000625171 ROBO2Q9HCK4 1378 aa16.14■□□□□ 0.17
LINC00963-220ENST00000625171 WAPLQ7Z5K2 1190 aa16.14■□□□□ 0.17
LINC00963-220ENST00000625171 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
LINC00963-220ENST00000625171 PANK3Q9H999 370 aa16.14■□□□□ 0.17
LINC00963-220ENST00000625171 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
LINC00963-220ENST00000625171 ADGRB2O60241 1585 aa16.13■□□□□ 0.17
LINC00963-220ENST00000625171 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
LINC00963-220ENST00000625171 WASLO00401 505 aaPredicted RBP16.12■□□□□ 0.17
LINC00963-220ENST00000625171 KCNA6P17658 529 aa16.12■□□□□ 0.17
LINC00963-220ENST00000625171 RALBP1Q15311 655 aa16.12■□□□□ 0.17
LINC00963-220ENST00000625171 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
LINC00963-220ENST00000625171 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
LINC00963-220ENST00000625171 XIRP1Q702N8 1843 aaKnown RBP16.12■□□□□ 0.17
LINC00963-220ENST00000625171 MYOM1P52179 1685 aa16.11■□□□□ 0.17
LINC00963-220ENST00000625171 CHD2O14647 1828 aaKnown RBP16.1■□□□□ 0.17
LINC00963-220ENST00000625171 MINK1Q8N4C8 1332 aaPredicted RBP16.1■□□□□ 0.17
LINC00963-220ENST00000625171 TMEM94Q12767 1356 aa16.09■□□□□ 0.17
LINC00963-220ENST00000625171 AMER1Q5JTC6 1135 aaPredicted RBP16.08■□□□□ 0.16
LINC00963-220ENST00000625171 KNSTRNQ9Y448 316 aa16.08■□□□□ 0.16
LINC00963-220ENST00000625171 ANKRD36BQ8N2N9 1353 aa16.08■□□□□ 0.16
LINC00963-220ENST00000625171 SRPK2P78362 688 aaKnown RBP16.07■□□□□ 0.16
LINC00963-220ENST00000625171 SAFB2Q14151 953 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC00963-220ENST00000625171 SLC12A5Q9H2X9 1139 aa16.07■□□□□ 0.16
LINC00963-220ENST00000625171 CABP2Q9NPB3 220 aa16.07■□□□□ 0.16
LINC00963-220ENST00000625171 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
LINC00963-220ENST00000625171 NCOA3Q9Y6Q9 1424 aa16.07■□□□□ 0.16
LINC00963-220ENST00000625171 NWD1Q149M9 1564 aa16.07■□□□□ 0.16
LINC00963-220ENST00000625171 NKTRP30414 1462 aaKnown RBP16.06■□□□□ 0.16
LINC00963-220ENST00000625171 POTEAQ6S8J7 498 aa16.06■□□□□ 0.16
LINC00963-220ENST00000625171 CARD14Q9BXL6 1004 aa16.06■□□□□ 0.16
LINC00963-220ENST00000625171 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
LINC00963-220ENST00000625171 TERF2IPQ9NYB0 399 aa16.05■□□□□ 0.16
LINC00963-220ENST00000625171 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.05■□□□□ 0.16
LINC00963-220ENST00000625171 ROBO1Q9Y6N7 1651 aa16.05■□□□□ 0.16
LINC00963-220ENST00000625171 ATP7BP35670 1465 aa16.03■□□□□ 0.16
LINC00963-220ENST00000625171 PLEKHG3A1L390 1219 aa16.03■□□□□ 0.16
LINC00963-220ENST00000625171 CPSF1Q10570 1443 aaKnown RBP16.02■□□□□ 0.16
LINC00963-220ENST00000625171 NSD2O96028 1365 aa16.02■□□□□ 0.16
LINC00963-220ENST00000625171 USP32Q8NFA0 1604 aa16.02■□□□□ 0.16
LINC00963-220ENST00000625171 PROSER2Q86WR7 435 aaPredicted RBP16.02■□□□□ 0.16
LINC00963-220ENST00000625171 NUDT16Q96DE0 195 aaKnown RBP16.02■□□□□ 0.16
LINC00963-220ENST00000625171 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
LINC00963-220ENST00000625171 CD163L1Q9NR16 1453 aa16.02■□□□□ 0.15
LINC00963-220ENST00000625171 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.15
LINC00963-220ENST00000625171 MYBBP1AQ9BQG0 1328 aaKnown RBP16.01■□□□□ 0.15
LINC00963-220ENST00000625171 TMC1Q8TDI8 760 aa16.01■□□□□ 0.15
LINC00963-220ENST00000625171 MSH6P52701 1360 aa16■□□□□ 0.15
LINC00963-220ENST00000625171 HDGFL2Q7Z4V5 671 aaPredicted RBP16■□□□□ 0.15
LINC00963-220ENST00000625171 CABP1Q9NZU7 370 aa16■□□□□ 0.15
LINC00963-220ENST00000625171 BRD4O60885 1362 aaPredicted RBP16■□□□□ 0.15
LINC00963-220ENST00000625171 JCADQ9P266 1359 aa16■□□□□ 0.15
LINC00963-220ENST00000625171 CGNL1Q0VF96 1302 aa15.98■□□□□ 0.15
LINC00963-220ENST00000625171 NLRP13Q86W25 1043 aa15.98■□□□□ 0.15
LINC00963-220ENST00000625171 ADGRL3Q9HAR2 1447 aa15.98■□□□□ 0.15
LINC00963-220ENST00000625171 A0A1W2PP64 1363 aa15.98■□□□□ 0.15
LINC00963-220ENST00000625171 PRR36Q9H6K5 1346 aa15.97■□□□□ 0.15
LINC00963-220ENST00000625171 CDC42BPGQ6DT37 1551 aa15.97■□□□□ 0.15
LINC00963-220ENST00000625171 SLAIN2Q9P270 581 aa15.97■□□□□ 0.15
LINC00963-220ENST00000625171 PPIP5K1Q6PFW1 1433 aa15.96■□□□□ 0.15
LINC00963-220ENST00000625171 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.15
LINC00963-220ENST00000625171 POLR3AO14802 1390 aaPredicted RBP15.95■□□□□ 0.14
LINC00963-220ENST00000625171 DCCP43146 1447 aa15.94■□□□□ 0.14
LINC00963-220ENST00000625171 PHLPP1O60346 1717 aa15.94■□□□□ 0.14
LINC00963-220ENST00000625171 C19orf44Q9H6X5 657 aa15.94■□□□□ 0.14
LINC00963-220ENST00000625171 TOPAZ1Q8N9V7 1692 aa15.94■□□□□ 0.14
LINC00963-220ENST00000625171 EDC4Q6P2E9 1401 aaKnown RBP15.94■□□□□ 0.14
LINC00963-220ENST00000625171 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
LINC00963-220ENST00000625171 INSRP06213 1382 aa15.93■□□□□ 0.14
LINC00963-220ENST00000625171 CC2D1BQ5T0F9 858 aaKnown RBP15.93■□□□□ 0.14
LINC00963-220ENST00000625171 FYB1O15117 783 aa15.92■□□□□ 0.14
LINC00963-220ENST00000625171 RBM33Q96EV2 1170 aaKnown RBP15.92■□□□□ 0.14
LINC00963-220ENST00000625171 FMN2Q9NZ56 1722 aa15.91■□□□□ 0.14
LINC00963-220ENST00000625171 COL16A1Q07092 1604 aaPredicted RBP15.91■□□□□ 0.14
LINC00963-220ENST00000625171 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms