RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 CFAP65Q6ZU64 1925 aaKnown RBP19.77■□□□□ 0.75
LINC00552-201ENST00000625151 SBNO2Q9Y2G9 1366 aa19.77■□□□□ 0.75
LINC00552-201ENST00000625151 SHPRHQ149N8 1683 aa19.76■□□□□ 0.75
LINC00552-201ENST00000625151 SIGLEC1Q9BZZ2 1709 aa19.76■□□□□ 0.75
LINC00552-201ENST00000625151 NOS1P29475 1434 aa19.76■□□□□ 0.75
LINC00552-201ENST00000625151 SLC4A3P48751 1232 aa19.76■□□□□ 0.75
LINC00552-201ENST00000625151 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
LINC00552-201ENST00000625151 POLR3AO14802 1390 aaPredicted RBP19.75■□□□□ 0.75
LINC00552-201ENST00000625151 ADGRB3O60242 1522 aa19.75■□□□□ 0.75
LINC00552-201ENST00000625151 SETBP1Q9Y6X0 1596 aa19.74■□□□□ 0.75
LINC00552-201ENST00000625151 CENPJQ9HC77 1338 aaPredicted RBP19.74■□□□□ 0.75
LINC00552-201ENST00000625151 QRICH2Q9H0J4 1663 aa19.73■□□□□ 0.75
LINC00552-201ENST00000625151 LMTK2Q8IWU2 1503 aa19.73■□□□□ 0.75
LINC00552-201ENST00000625151 PPLO60437 1756 aa19.73■□□□□ 0.75
LINC00552-201ENST00000625151 VIRMAQ69YN4 1812 aaKnown RBP19.73■□□□□ 0.75
LINC00552-201ENST00000625151 NSD3Q9BZ95 1437 aa19.73■□□□□ 0.75
LINC00552-201ENST00000625151 WWC1Q8IX03 1113 aa19.72■□□□□ 0.75
LINC00552-201ENST00000625151 NGEFQ8N5V2 710 aa19.72■□□□□ 0.75
LINC00552-201ENST00000625151 ABCC3O15438 1527 aa19.72■□□□□ 0.75
LINC00552-201ENST00000625151 IGHDP01880 384 aa19.7■□□□□ 0.74
LINC00552-201ENST00000625151 CHGAP10645 457 aaKnown RBP19.7■□□□□ 0.74
LINC00552-201ENST00000625151 TRAK1Q9UPV9 953 aa19.7■□□□□ 0.74
LINC00552-201ENST00000625151 NPATQ14207 1427 aa19.7■□□□□ 0.74
LINC00552-201ENST00000625151 TNNT2P45379 298 aaPredicted RBP19.69■□□□□ 0.74
LINC00552-201ENST00000625151 MORC1Q86VD1 984 aa19.68■□□□□ 0.74
LINC00552-201ENST00000625151 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
LINC00552-201ENST00000625151 ADGRB1O14514 1584 aa19.68■□□□□ 0.74
LINC00552-201ENST00000625151 PDE3AQ14432 1141 aa19.68■□□□□ 0.74
LINC00552-201ENST00000625151 CGNL1Q0VF96 1302 aa19.67■□□□□ 0.74
LINC00552-201ENST00000625151 PANK1Q8TE04 598 aa19.67■□□□□ 0.74
LINC00552-201ENST00000625151 IQSEC2Q5JU85 1478 aa19.66■□□□□ 0.74
LINC00552-201ENST00000625151 MLECQ14165 292 aa19.66■□□□□ 0.74
LINC00552-201ENST00000625151 NEUROD2Q15784 382 aa19.66■□□□□ 0.74
LINC00552-201ENST00000625151 DAXXQ9UER7 740 aaPredicted RBP19.66■□□□□ 0.74
LINC00552-201ENST00000625151 RRP7AQ9Y3A4 280 aaKnown RBP19.66■□□□□ 0.74
LINC00552-201ENST00000625151 NFKBIBQ15653 356 aa19.66■□□□□ 0.74
LINC00552-201ENST00000625151 COG6Q9Y2V7 657 aa19.66■□□□□ 0.74
LINC00552-201ENST00000625151 ARHGEF40Q8TER5 1519 aa19.66■□□□□ 0.74
LINC00552-201ENST00000625151 C14orf93Q9H972 538 aaKnown RBP19.65■□□□□ 0.74
LINC00552-201ENST00000625151 NINLQ9Y2I6 1382 aa19.65■□□□□ 0.74
LINC00552-201ENST00000625151 TMEM132EQ6IEE7 984 aa19.65■□□□□ 0.74
LINC00552-201ENST00000625151 CAMSAP1Q5T5Y3 1602 aa19.64■□□□□ 0.73
LINC00552-201ENST00000625151 USP32Q8NFA0 1604 aa19.64■□□□□ 0.73
LINC00552-201ENST00000625151 CANXP27824 592 aaKnown RBP19.64■□□□□ 0.73
LINC00552-201ENST00000625151 CLUAP1Q96AJ1 413 aa19.64■□□□□ 0.73
LINC00552-201ENST00000625151 RUNDC1Q96C34 613 aa19.64■□□□□ 0.73
LINC00552-201ENST00000625151 REREQ9P2R6 1566 aa19.63■□□□□ 0.73
LINC00552-201ENST00000625151 TCP11L2Q8N4U5 519 aa19.62■□□□□ 0.73
LINC00552-201ENST00000625151 FRAT1Q92837 279 aaPredicted RBP19.62■□□□□ 0.73
LINC00552-201ENST00000625151 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
LINC00552-201ENST00000625151 AGLP35573 1532 aa19.61■□□□□ 0.73
LINC00552-201ENST00000625151 RARSP54136 660 aaKnown RBP19.6■□□□□ 0.73
LINC00552-201ENST00000625151 MTHFSP49914 203 aa19.6■□□□□ 0.73
LINC00552-201ENST00000625151 IL27Q8NEV9 243 aa19.59■□□□□ 0.73
LINC00552-201ENST00000625151 USP19O94966 1318 aa19.59■□□□□ 0.73
LINC00552-201ENST00000625151 ARHGEF28Q8N1W1 1705 aaKnown RBP19.58■□□□□ 0.73
LINC00552-201ENST00000625151 FBXO31Q5XUX0 539 aaPredicted RBP19.58■□□□□ 0.73
LINC00552-201ENST00000625151 TNNQ9UQP3 1299 aa19.58■□□□□ 0.72
LINC00552-201ENST00000625151 TULP4Q9NRJ4 1543 aa19.56■□□□□ 0.72
LINC00552-201ENST00000625151 MAPK8IP3Q9UPT6 1336 aa19.56■□□□□ 0.72
LINC00552-201ENST00000625151 RLBP1P12271 317 aa19.56■□□□□ 0.72
LINC00552-201ENST00000625151 SEC24BO95487 1268 aa19.56■□□□□ 0.72
LINC00552-201ENST00000625151 WDR63Q8IWG1 891 aa19.56■□□□□ 0.72
LINC00552-201ENST00000625151 GSE1Q14687 1217 aa19.55■□□□□ 0.72
LINC00552-201ENST00000625151 BCL2L13Q9BXK5 485 aa19.55■□□□□ 0.72
LINC00552-201ENST00000625151 NUTM2DQ5VT03 806 aaPredicted RBP19.55■□□□□ 0.72
LINC00552-201ENST00000625151 ARHGAP31Q2M1Z3 1444 aa19.55■□□□□ 0.72
LINC00552-201ENST00000625151 RPGRIP1LQ68CZ1 1315 aa19.54■□□□□ 0.72
LINC00552-201ENST00000625151 PCDHB15Q9Y5E8 787 aa19.54■□□□□ 0.72
LINC00552-201ENST00000625151 CLTCQ00610 1675 aaKnown RBP19.53■□□□□ 0.72
LINC00552-201ENST00000625151 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
LINC00552-201ENST00000625151 CFAP53Q96M91 514 aa19.53■□□□□ 0.72
LINC00552-201ENST00000625151 ANKRD36BQ8N2N9 1353 aa19.53■□□□□ 0.72
LINC00552-201ENST00000625151 PIK3C2BO00750 1634 aa19.52■□□□□ 0.72
LINC00552-201ENST00000625151 NLRP1Q9C000 1473 aa19.52■□□□□ 0.71
LINC00552-201ENST00000625151 NEXMIFQ5QGS0 1516 aa19.51■□□□□ 0.71
LINC00552-201ENST00000625151 FRAT2O75474 233 aaPredicted RBP19.51■□□□□ 0.71
LINC00552-201ENST00000625151 ADGRB2O60241 1585 aa19.51■□□□□ 0.71
LINC00552-201ENST00000625151 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
LINC00552-201ENST00000625151 IDI1Q13907 227 aa19.51■□□□□ 0.71
LINC00552-201ENST00000625151 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
LINC00552-201ENST00000625151 U2AF1L5P0DN76 240 aaPredicted RBP19.49■□□□□ 0.71
LINC00552-201ENST00000625151 U2AF1Q01081 240 aaKnown RBP eCLIP19.49■□□□□ 0.71
LINC00552-201ENST00000625151 CABP2Q9NPB3 220 aa19.49■□□□□ 0.71
LINC00552-201ENST00000625151 PREX1Q8TCU6 1659 aa19.49■□□□□ 0.71
LINC00552-201ENST00000625151 NSD2O96028 1365 aa19.49■□□□□ 0.71
LINC00552-201ENST00000625151 AAMPQ13685 434 aa19.48■□□□□ 0.71
LINC00552-201ENST00000625151 PUS7Q96PZ0 661 aaKnown RBP19.48■□□□□ 0.71
LINC00552-201ENST00000625151 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
LINC00552-201ENST00000625151 RTN4Q9NQC3 1192 aaKnown RBP19.47■□□□□ 0.71
LINC00552-201ENST00000625151 SAFB2Q14151 953 aaKnown RBP eCLIP19.46■□□□□ 0.71
LINC00552-201ENST00000625151 PDZRN3Q9UPQ7 1066 aa19.46■□□□□ 0.71
LINC00552-201ENST00000625151 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
LINC00552-201ENST00000625151 VGFO15240 615 aaPredicted RBP19.45■□□□□ 0.7
LINC00552-201ENST00000625151 NCBP3Q53F19 620 aaKnown RBP19.45■□□□□ 0.7
LINC00552-201ENST00000625151 A0A1W2PP64 1363 aa19.44■□□□□ 0.7
LINC00552-201ENST00000625151 MYO5BQ9ULV0 1848 aa19.44■□□□□ 0.7
LINC00552-201ENST00000625151 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
LINC00552-201ENST00000625151 ANO8Q9HCE9 1232 aaPredicted RBP19.43■□□□□ 0.7
LINC00552-201ENST00000625151 BRPF3Q9ULD4 1205 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms