RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
PCDHB9-203ENST00000624909 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
PCDHB9-203ENST00000624909 STRCQ7RTU9 1775 aa11.72□□□□□ -0.53
PCDHB9-203ENST00000624909 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
PCDHB9-203ENST00000624909 TBX22Q9Y458 520 aa11.71□□□□□ -0.53
PCDHB9-203ENST00000624909 PIK3R4Q99570 1358 aa11.7□□□□□ -0.54
PCDHB9-203ENST00000624909 ZNF467Q7Z7K2 595 aaPredicted RBP11.7□□□□□ -0.54
PCDHB9-203ENST00000624909 SGIP1Q9BQI5 828 aa11.7□□□□□ -0.54
PCDHB9-203ENST00000624909 TIMELESSQ9UNS1 1208 aa11.7□□□□□ -0.54
PCDHB9-203ENST00000624909 NEXMIFQ5QGS0 1516 aa11.69□□□□□ -0.54
PCDHB9-203ENST00000624909 IQGAP1P46940 1657 aa11.68□□□□□ -0.54
PCDHB9-203ENST00000624909 DIP2AQ14689 1571 aa11.68□□□□□ -0.54
PCDHB9-203ENST00000624909 RGL3Q3MIN7 710 aa11.68□□□□□ -0.54
PCDHB9-203ENST00000624909 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
PCDHB9-203ENST00000624909 STK25O00506 426 aa11.67□□□□□ -0.54
PCDHB9-203ENST00000624909 HAP1P54257 671 aaPredicted RBP11.67□□□□□ -0.54
PCDHB9-203ENST00000624909 BCANQ96GW7 911 aa11.67□□□□□ -0.54
PCDHB9-203ENST00000624909 MYOM2P54296 1465 aa11.67□□□□□ -0.54
PCDHB9-203ENST00000624909 SETBP1Q9Y6X0 1596 aa11.67□□□□□ -0.54
PCDHB9-203ENST00000624909 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
PCDHB9-203ENST00000624909 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
PCDHB9-203ENST00000624909 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
PCDHB9-203ENST00000624909 MYO5BQ9ULV0 1848 aa11.65□□□□□ -0.54
PCDHB9-203ENST00000624909 NRXN1Q9ULB1 1477 aa11.64□□□□□ -0.55
PCDHB9-203ENST00000624909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
PCDHB9-203ENST00000624909 KCNA6P17658 529 aa11.64□□□□□ -0.55
PCDHB9-203ENST00000624909 DCAF11Q8TEB1 546 aa11.64□□□□□ -0.55
PCDHB9-203ENST00000624909 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
PCDHB9-203ENST00000624909 CPS1P31327 1500 aa11.64□□□□□ -0.55
PCDHB9-203ENST00000624909 PPLO60437 1756 aa11.64□□□□□ -0.55
PCDHB9-203ENST00000624909 PIK3C2GO75747 1445 aa11.63□□□□□ -0.55
PCDHB9-203ENST00000624909 ADAMTS13Q76LX8 1427 aa11.63□□□□□ -0.55
PCDHB9-203ENST00000624909 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
PCDHB9-203ENST00000624909 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
PCDHB9-203ENST00000624909 CCER1Q8TC90 406 aaPredicted RBP11.62□□□□□ -0.55
PCDHB9-203ENST00000624909 SLC26A8Q96RN1 970 aa11.62□□□□□ -0.55
PCDHB9-203ENST00000624909 C14orf93Q9H972 538 aaKnown RBP11.62□□□□□ -0.55
PCDHB9-203ENST00000624909 IQSEC2Q5JU85 1478 aa11.62□□□□□ -0.55
PCDHB9-203ENST00000624909 NCOA3Q9Y6Q9 1424 aa11.61□□□□□ -0.55
PCDHB9-203ENST00000624909 IFT172Q9UG01 1749 aa11.61□□□□□ -0.55
PCDHB9-203ENST00000624909 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
PCDHB9-203ENST00000624909 STK24Q9Y6E0 443 aa11.61□□□□□ -0.55
PCDHB9-203ENST00000624909 TONSLQ96HA7 1378 aa11.61□□□□□ -0.55
PCDHB9-203ENST00000624909 NKTRP30414 1462 aaKnown RBP11.61□□□□□ -0.55
PCDHB9-203ENST00000624909 ADGRF5Q8IZF2 1346 aa11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 PRAG1Q86YV5 1406 aa11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 NEUROD1Q13562 356 aa11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 NUTM2DQ5VT03 806 aaPredicted RBP11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 L3MBTL2Q969R5 705 aa11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 SIN3AQ96ST3 1273 aa11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 PCDHB13Q9Y5F0 798 aa11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 LAMC1P11047 1609 aa11.6□□□□□ -0.55
PCDHB9-203ENST00000624909 SIRT1Q96EB6 747 aa11.59□□□□□ -0.55
PCDHB9-203ENST00000624909 KIF12Q96FN5 646 aa11.59□□□□□ -0.55
PCDHB9-203ENST00000624909 ZNF335Q9H4Z2 1342 aaPredicted RBP11.59□□□□□ -0.55
PCDHB9-203ENST00000624909 LTBP4Q8N2S1 1624 aa11.58□□□□□ -0.56
PCDHB9-203ENST00000624909 ALKQ9UM73 1620 aa11.58□□□□□ -0.56
PCDHB9-203ENST00000624909 NWD1Q149M9 1564 aa11.58□□□□□ -0.56
PCDHB9-203ENST00000624909 NRXN3Q9Y4C0 1643 aa11.57□□□□□ -0.56
PCDHB9-203ENST00000624909 ABCC11Q96J66 1382 aa11.57□□□□□ -0.56
PCDHB9-203ENST00000624909 C19orf67A6NJJ6 358 aa11.57□□□□□ -0.56
PCDHB9-203ENST00000624909 MAP3K13O43283 966 aa11.57□□□□□ -0.56
PCDHB9-203ENST00000624909 AMOTL2Q9Y2J4 779 aa11.57□□□□□ -0.56
PCDHB9-203ENST00000624909 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
PCDHB9-203ENST00000624909 METP08581 1390 aa11.56□□□□□ -0.56
PCDHB9-203ENST00000624909 PTCH1Q13635 1447 aa11.56□□□□□ -0.56
PCDHB9-203ENST00000624909 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
PCDHB9-203ENST00000624909 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
PCDHB9-203ENST00000624909 LRPPRCP42704 1394 aaKnown RBP11.55□□□□□ -0.56
PCDHB9-203ENST00000624909 TECPR2O15040 1411 aa11.55□□□□□ -0.56
PCDHB9-203ENST00000624909 HAX1O00165 279 aa11.55□□□□□ -0.56
PCDHB9-203ENST00000624909 NKX1-1Q15270 411 aaPredicted RBP11.55□□□□□ -0.56
PCDHB9-203ENST00000624909 KIAA1210Q9ULL0 1709 aa11.55□□□□□ -0.56
PCDHB9-203ENST00000624909 PSEN1P49768 467 aa11.54□□□□□ -0.56
PCDHB9-203ENST00000624909 CFAP70Q5T0N1 1121 aa11.54□□□□□ -0.56
PCDHB9-203ENST00000624909 PROSER2Q86WR7 435 aaPredicted RBP11.54□□□□□ -0.56
PCDHB9-203ENST00000624909 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
PCDHB9-203ENST00000624909 FAM135BQ49AJ0 1406 aa11.53□□□□□ -0.56
PCDHB9-203ENST00000624909 LRRC7Q96NW7 1537 aa11.53□□□□□ -0.56
PCDHB9-203ENST00000624909 YTHDC2Q9H6S0 1430 aaKnown RBP11.52□□□□□ -0.56
PCDHB9-203ENST00000624909 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.56
PCDHB9-203ENST00000624909 VSIG10Q8N0Z9 540 aa11.52□□□□□ -0.57
PCDHB9-203ENST00000624909 PHF12Q96QT6 1004 aa11.52□□□□□ -0.57
PCDHB9-203ENST00000624909 C19orf44Q9H6X5 657 aa11.52□□□□□ -0.57
PCDHB9-203ENST00000624909 RYDENQ9NUL5 291 aaKnown RBP11.52□□□□□ -0.57
PCDHB9-203ENST00000624909 XRN1Q8IZH2 1706 aaKnown RBP11.52□□□□□ -0.57
PCDHB9-203ENST00000624909 PTPRUQ92729 1446 aa11.52□□□□□ -0.57
PCDHB9-203ENST00000624909 TMEM94Q12767 1356 aa11.51□□□□□ -0.57
PCDHB9-203ENST00000624909 DCCP43146 1447 aa11.51□□□□□ -0.57
PCDHB9-203ENST00000624909 DLC1Q96QB1 1528 aa11.5□□□□□ -0.57
PCDHB9-203ENST00000624909 ADGRB1O14514 1584 aa11.5□□□□□ -0.57
PCDHB9-203ENST00000624909 TOM1O60784 492 aa11.5□□□□□ -0.57
PCDHB9-203ENST00000624909 MSH6P52701 1360 aa11.5□□□□□ -0.57
PCDHB9-203ENST00000624909 GPRASP1Q5JY77 1395 aa11.5□□□□□ -0.57
PCDHB9-203ENST00000624909 TMEM132EQ6IEE7 984 aa11.49□□□□□ -0.57
PCDHB9-203ENST00000624909 CADPS2Q86UW7 1296 aa11.49□□□□□ -0.57
PCDHB9-203ENST00000624909 GTPBP6O43824 516 aaPredicted RBP11.48□□□□□ -0.57
PCDHB9-203ENST00000624909 ROCK2O75116 1388 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms