RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 DCAF8L1A6NGE4 600 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 R3HCC1Q9Y3T6 440 aaKnown RBP6.91□□□□□ -1.3
ERCC6-213ENST00000624341 COL17A1Q9UMD9 1497 aaPredicted RBP6.9□□□□□ -1.3
ERCC6-213ENST00000624341 RIPK4P57078 832 aa6.9□□□□□ -1.3
ERCC6-213ENST00000624341 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.9□□□□□ -1.3
ERCC6-213ENST00000624341 ZNF771Q7L3S4 317 aaPredicted RBP6.9□□□□□ -1.3
ERCC6-213ENST00000624341 CCAR2Q8N163 923 aaKnown RBP6.9□□□□□ -1.3
ERCC6-213ENST00000624341 H3BQV1 296 aa6.9□□□□□ -1.3
ERCC6-213ENST00000624341 IFFO2Q5TF58 517 aa6.9□□□□□ -1.3
ERCC6-213ENST00000624341 CCDC9Q9Y3X0 531 aaKnown RBP6.9□□□□□ -1.3
ERCC6-213ENST00000624341 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.9□□□□□ -1.3
ERCC6-213ENST00000624341 GOLGA6L1Q8N7Z2 621 aa6.9□□□□□ -1.3
ERCC6-213ENST00000624341 RNF214Q8ND24 703 aa6.9□□□□□ -1.3
ERCC6-213ENST00000624341 AMPHP49418 695 aa6.9□□□□□ -1.31
ERCC6-213ENST00000624341 ANO2Q9NQ90 1003 aa6.9□□□□□ -1.31
ERCC6-213ENST00000624341 DENND4BO75064 1496 aaPredicted RBP6.9□□□□□ -1.31
ERCC6-213ENST00000624341 NASPP49321 788 aaPredicted RBP6.89□□□□□ -1.31
ERCC6-213ENST00000624341 WASHC2CQ9Y4E1 1318 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 FANCAO15360 1455 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 HDAC5Q9UQL6 1122 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 HECW2Q9P2P5 1572 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 NUP153P49790 1475 aaKnown RBP6.89□□□□□ -1.31
ERCC6-213ENST00000624341 NUCB2P80303 420 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 FAM184AQ8NB25 1140 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 CHMP4AQ9BY43 222 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 PCF11O94913 1555 aaKnown RBP6.89□□□□□ -1.31
ERCC6-213ENST00000624341 CSB-PGBD3P0DP91 1061 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 RUNDC1Q96C34 613 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 BCL11BQ9C0K0 894 aaPredicted RBP6.89□□□□□ -1.31
ERCC6-213ENST00000624341 ARHGEF40Q8TER5 1519 aa6.89□□□□□ -1.31
ERCC6-213ENST00000624341 NOC3LQ8WTT2 800 aaKnown RBP6.89□□□□□ -1.31
ERCC6-213ENST00000624341 FGD6Q6ZV73 1430 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 CLSTN1O94985 981 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 NGEFQ8N5V2 710 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 MAGI2Q86UL8 1455 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 NGDNQ8NEJ9 315 aaKnown RBP6.88□□□□□ -1.31
ERCC6-213ENST00000624341 CCDC34Q96HJ3 373 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 DIAPH3Q9NSV4 1193 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 KIF3AQ9Y496 699 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 BRD4O60885 1362 aaPredicted RBP6.88□□□□□ -1.31
ERCC6-213ENST00000624341 ADAMTSL3P82987 1691 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 BCORL1Q5H9F3 1711 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 ZMYM4Q5VZL5 1548 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 NECTIN2Q92692 538 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 TOMM22Q9NS69 142 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 TAF7LQ5H9L4 462 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 MINK1Q8N4C8 1332 aaPredicted RBP6.88□□□□□ -1.31
ERCC6-213ENST00000624341 VPS37CA5D8V6 355 aaPredicted RBP6.88□□□□□ -1.31
ERCC6-213ENST00000624341 DIAPH1O60610 1272 aaKnown RBP6.88□□□□□ -1.31
ERCC6-213ENST00000624341 RASSF8Q8NHQ8 419 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 PDZRN3Q9UPQ7 1066 aa6.88□□□□□ -1.31
ERCC6-213ENST00000624341 PNISRQ8TF01 805 aaKnown RBP6.87□□□□□ -1.31
ERCC6-213ENST00000624341 BCAR3O75815 825 aa6.87□□□□□ -1.31
ERCC6-213ENST00000624341 TPM3P06753 285 aa6.87□□□□□ -1.31
ERCC6-213ENST00000624341 CAVIN1Q6NZI2 390 aaKnown RBP6.87□□□□□ -1.31
ERCC6-213ENST00000624341 API5Q9BZZ5 524 aaKnown RBP6.87□□□□□ -1.31
ERCC6-213ENST00000624341 KIF14Q15058 1648 aa6.87□□□□□ -1.31
ERCC6-213ENST00000624341 NBPF8Q3BBV2 869 aa6.87□□□□□ -1.31
ERCC6-213ENST00000624341 EVC2Q86UK5 1308 aa6.87□□□□□ -1.31
ERCC6-213ENST00000624341 ZFYVE16Q7Z3T8 1539 aa6.87□□□□□ -1.31
ERCC6-213ENST00000624341 INTS3Q68E01 1043 aaKnown RBP6.87□□□□□ -1.31
ERCC6-213ENST00000624341 MYO5CQ9NQX4 1742 aa6.87□□□□□ -1.31
ERCC6-213ENST00000624341 PES1O00541 588 aaKnown RBP6.86□□□□□ -1.31
ERCC6-213ENST00000624341 BICD2Q8TD16 824 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 RICTORQ6R327 1708 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 RBM10P98175 930 aaKnown RBP6.86□□□□□ -1.31
ERCC6-213ENST00000624341 TIAM1Q13009 1591 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 ZKSCAN1P17029 563 aaPredicted RBP6.86□□□□□ -1.31
ERCC6-213ENST00000624341 EIF2S2P20042 333 aaKnown RBP6.86□□□□□ -1.31
ERCC6-213ENST00000624341 TCP11L2Q8N4U5 519 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 FRMPD1Q5SYB0 1578 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 COG3Q96JB2 828 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 EHBP1L1Q8N3D4 1523 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.86□□□□□ -1.31
ERCC6-213ENST00000624341 PDE4CQ08493 712 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 FBXW7Q969H0 707 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 IFT57Q9NWB7 429 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 SMC3Q9UQE7 1217 aa6.86□□□□□ -1.31
ERCC6-213ENST00000624341 HMOX1P09601 288 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 SKAP1Q86WV1 359 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 PRM3Q9NNZ6 103 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 HOMER1Q86YM7 354 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 MYOM3Q5VTT5 1437 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 PRPF40AO75400 957 aaKnown RBP6.85□□□□□ -1.31
ERCC6-213ENST00000624341 LRRC9Q6ZRR7 1453 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 CDC45O75419 566 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 PPP2R1AP30153 589 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 FKBP5Q13451 457 aaPredicted RBP6.85□□□□□ -1.31
ERCC6-213ENST00000624341 RUFY2Q8WXA3 655 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
ERCC6-213ENST00000624341 MTHFSP49914 203 aa6.84□□□□□ -1.31
ERCC6-213ENST00000624341 MPNDQ8N594 471 aa6.84□□□□□ -1.31
ERCC6-213ENST00000624341 LRRIQ1Q96JM4 1722 aa6.84□□□□□ -1.31
ERCC6-213ENST00000624341 PTPRMP28827 1452 aa6.84□□□□□ -1.31
ERCC6-213ENST00000624341 PLCH2O75038 1416 aa6.84□□□□□ -1.31
ERCC6-213ENST00000624341 A0A0U1RQG5 324 aaPredicted RBP6.84□□□□□ -1.31
ERCC6-213ENST00000624341 VGFO15240 615 aaPredicted RBP6.84□□□□□ -1.31
ERCC6-213ENST00000624341 AAMPQ13685 434 aa6.84□□□□□ -1.31
ERCC6-213ENST00000624341 NBPF1Q3BBV0 1214 aa6.84□□□□□ -1.31
ERCC6-213ENST00000624341 TPD52L1Q16890 204 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms