RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 MRPL50Q8N5N7 158 aaKnown RBP8.44□□□□□ -1.06
SRSF4-207ENST00000622143 KCTD12Q96CX2 325 aaKnown RBP8.44□□□□□ -1.06
SRSF4-207ENST00000622143 NBPF3Q9H094 633 aa8.44□□□□□ -1.06
SRSF4-207ENST00000622143 KIAA1468Q9P260 1216 aa8.44□□□□□ -1.06
SRSF4-207ENST00000622143 TSKSQ9UJT2 592 aa8.44□□□□□ -1.06
SRSF4-207ENST00000622143 FANCAO15360 1455 aa8.44□□□□□ -1.06
SRSF4-207ENST00000622143 GOLGA3Q08378 1498 aa8.44□□□□□ -1.06
SRSF4-207ENST00000622143 PREX1Q8TCU6 1659 aa8.43□□□□□ -1.06
SRSF4-207ENST00000622143 RICTORQ6R327 1708 aa8.43□□□□□ -1.06
SRSF4-207ENST00000622143 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
SRSF4-207ENST00000622143 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.43□□□□□ -1.06
SRSF4-207ENST00000622143 NPDC1Q9NQX5 325 aaPredicted RBP8.43□□□□□ -1.06
SRSF4-207ENST00000622143 FAM198AQ9UFP1 575 aa8.43□□□□□ -1.06
SRSF4-207ENST00000622143 POGZQ7Z3K3 1410 aa8.43□□□□□ -1.06
SRSF4-207ENST00000622143 AKNAQ7Z591 1439 aa8.43□□□□□ -1.06
SRSF4-207ENST00000622143 DENND4BO75064 1496 aaPredicted RBP8.43□□□□□ -1.06
SRSF4-207ENST00000622143 ZFYVE16Q7Z3T8 1539 aa8.43□□□□□ -1.06
SRSF4-207ENST00000622143 SMYD5Q6GMV2 418 aa8.42□□□□□ -1.06
SRSF4-207ENST00000622143 STAC3Q96MF2 364 aa8.42□□□□□ -1.06
SRSF4-207ENST00000622143 PHLDB1Q86UU1 1377 aa8.42□□□□□ -1.06
SRSF4-207ENST00000622143 TTC37Q6PGP7 1564 aa8.42□□□□□ -1.06
SRSF4-207ENST00000622143 PRSS12P56730 875 aa8.41□□□□□ -1.06
SRSF4-207ENST00000622143 LAPTM4BQ86VI4 370 aa8.41□□□□□ -1.06
SRSF4-207ENST00000622143 CDCA7LQ96GN5 454 aa8.41□□□□□ -1.06
SRSF4-207ENST00000622143 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
SRSF4-207ENST00000622143 THSD4Q6ZMP0 1018 aa8.4□□□□□ -1.06
SRSF4-207ENST00000622143 TTC13Q8NBP0 860 aa8.4□□□□□ -1.06
SRSF4-207ENST00000622143 RBM26Q5T8P6 1007 aaKnown RBP8.39□□□□□ -1.07
SRSF4-207ENST00000622143 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
SRSF4-207ENST00000622143 SEPT9Q9UHD8 586 aaPredicted RBP8.39□□□□□ -1.07
SRSF4-207ENST00000622143 HECW1Q76N89 1606 aa8.39□□□□□ -1.07
SRSF4-207ENST00000622143 EFCAB5A4FU69 1503 aa8.39□□□□□ -1.07
SRSF4-207ENST00000622143 UHRF1BP1Q6BDS2 1440 aa8.38□□□□□ -1.07
SRSF4-207ENST00000622143 UBAP1LF5GYI3 381 aa8.38□□□□□ -1.07
SRSF4-207ENST00000622143 WNT2BQ93097 391 aa8.38□□□□□ -1.07
SRSF4-207ENST00000622143 LTBP4Q8N2S1 1624 aa8.38□□□□□ -1.07
SRSF4-207ENST00000622143 RAPGEF6Q8TEU7 1601 aa8.38□□□□□ -1.07
SRSF4-207ENST00000622143 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
SRSF4-207ENST00000622143 LCE2BO14633 110 aa8.37□□□□□ -1.07
SRSF4-207ENST00000622143 ZFRQ96KR1 1074 aaKnown RBP8.37□□□□□ -1.07
SRSF4-207ENST00000622143 ZMYM4Q5VZL5 1548 aa8.37□□□□□ -1.07
SRSF4-207ENST00000622143 ARHGEF12Q9NZN5 1544 aa8.37□□□□□ -1.07
SRSF4-207ENST00000622143 FAM98CQ17RN3 349 aaKnown RBP8.36□□□□□ -1.07
SRSF4-207ENST00000622143 Q6ZNB5 142 aa8.36□□□□□ -1.07
SRSF4-207ENST00000622143 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
SRSF4-207ENST00000622143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.35□□□□□ -1.07
SRSF4-207ENST00000622143 NUP153P49790 1475 aaKnown RBP8.35□□□□□ -1.07
SRSF4-207ENST00000622143 GOLGA8CPA6NN73 597 aa8.35□□□□□ -1.07
SRSF4-207ENST00000622143 MED1Q15648 1581 aaPredicted RBP8.35□□□□□ -1.07
SRSF4-207ENST00000622143 CFAP74Q9C0B2 1584 aa8.35□□□□□ -1.07
SRSF4-207ENST00000622143 ZNF335Q9H4Z2 1342 aaPredicted RBP8.34□□□□□ -1.07
SRSF4-207ENST00000622143 NUTM2FA1L443 756 aa8.34□□□□□ -1.07
SRSF4-207ENST00000622143 PTGDRQ13258 359 aa8.34□□□□□ -1.07
SRSF4-207ENST00000622143 PADI6Q6TGC4 694 aa8.34□□□□□ -1.07
SRSF4-207ENST00000622143 GPIHBP1Q8IV16 184 aa8.34□□□□□ -1.07
SRSF4-207ENST00000622143 FAM9AQ8IZU1 332 aaPredicted RBP8.34□□□□□ -1.07
SRSF4-207ENST00000622143 PTPRTO14522 1441 aa8.34□□□□□ -1.07
SRSF4-207ENST00000622143 SCAPERQ9BY12 1400 aa8.34□□□□□ -1.07
SRSF4-207ENST00000622143 SOWAHBA6NEL2 793 aa8.33□□□□□ -1.08
SRSF4-207ENST00000622143 SMAPO00193 183 aa8.33□□□□□ -1.08
SRSF4-207ENST00000622143 BCAMP50895 628 aa8.33□□□□□ -1.08
SRSF4-207ENST00000622143 PTPN5P54829 565 aa8.33□□□□□ -1.08
SRSF4-207ENST00000622143 C9orf84Q5VXU9 1444 aa8.33□□□□□ -1.08
SRSF4-207ENST00000622143 ANKK1Q8NFD2 765 aa8.33□□□□□ -1.08
SRSF4-207ENST00000622143 ATP10AO60312 1499 aa8.32□□□□□ -1.08
SRSF4-207ENST00000622143 PLEKHD1A6NEE1 506 aa8.32□□□□□ -1.08
SRSF4-207ENST00000622143 RGS20O76081 388 aa8.32□□□□□ -1.08
SRSF4-207ENST00000622143 PIP4K2BP78356 416 aa8.32□□□□□ -1.08
SRSF4-207ENST00000622143 ZC3H15Q8WU90 426 aaKnown RBP8.32□□□□□ -1.08
SRSF4-207ENST00000622143 TATDN2Q93075 761 aa8.32□□□□□ -1.08
SRSF4-207ENST00000622143 C3P01024 1663 aa8.32□□□□□ -1.08
SRSF4-207ENST00000622143 NBPF26B4DH59 902 aa8.31□□□□□ -1.08
SRSF4-207ENST00000622143 HSPA1LP34931 641 aa8.31□□□□□ -1.08
SRSF4-207ENST00000622143 MAGI2Q86UL8 1455 aa8.31□□□□□ -1.08
SRSF4-207ENST00000622143 SAMD9Q5K651 1589 aa8.31□□□□□ -1.08
SRSF4-207ENST00000622143 NCOA1Q15788 1441 aa8.3□□□□□ -1.08
SRSF4-207ENST00000622143 CDK13Q14004 1512 aaKnown RBP8.3□□□□□ -1.08
SRSF4-207ENST00000622143 CAMSAP1Q5T5Y3 1602 aa8.3□□□□□ -1.08
SRSF4-207ENST00000622143 PNMA3Q9UL41 463 aa8.3□□□□□ -1.08
SRSF4-207ENST00000622143 NUDT18Q6ZVK8 323 aa8.29□□□□□ -1.08
SRSF4-207ENST00000622143 IQSEC2Q5JU85 1478 aa8.29□□□□□ -1.08
SRSF4-207ENST00000622143 PRXQ9BXM0 1461 aa8.29□□□□□ -1.08
SRSF4-207ENST00000622143 GPR37O15354 613 aa8.28□□□□□ -1.08
SRSF4-207ENST00000622143 EYA1Q99502 592 aa8.28□□□□□ -1.08
SRSF4-207ENST00000622143 ESF1Q9H501 851 aaKnown RBP8.28□□□□□ -1.08
SRSF4-207ENST00000622143 AFAP1Q8N556 730 aa8.27□□□□□ -1.09
SRSF4-207ENST00000622143 WBP1LQ9NX94 342 aa8.27□□□□□ -1.09
SRSF4-207ENST00000622143 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.27□□□□□ -1.09
SRSF4-207ENST00000622143 ATP1B4Q9UN42 357 aaPredicted RBP8.27□□□□□ -1.09
SRSF4-207ENST00000622143 DIP2CQ9Y2E4 1556 aa8.27□□□□□ -1.09
SRSF4-207ENST00000622143 ABCA6Q8N139 1617 aa8.26□□□□□ -1.09
SRSF4-207ENST00000622143 FCHSD2O94868 740 aa8.26□□□□□ -1.09
SRSF4-207ENST00000622143 SAMD7Q7Z3H4 446 aa8.26□□□□□ -1.09
SRSF4-207ENST00000622143 LRCH3Q96II8 777 aa8.26□□□□□ -1.09
SRSF4-207ENST00000622143 LOC100996750A0A140TA64 210 aa8.25□□□□□ -1.09
SRSF4-207ENST00000622143 KRTAP4-6Q9BYQ5 205 aa8.25□□□□□ -1.09
SRSF4-207ENST00000622143 TSR3Q9UJK0 312 aaKnown RBP8.25□□□□□ -1.09
SRSF4-207ENST00000622143 ADGRG1Q9Y653 693 aa8.25□□□□□ -1.09
SRSF4-207ENST00000622143 PLCH2O75038 1416 aa8.24□□□□□ -1.09
SRSF4-207ENST00000622143 TRAPPC8Q9Y2L5 1435 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms