RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLTC-215ENST00000621829 KDM4AO75164 1064 aa13.91□□□□□ -0.18
CLTC-215ENST00000621829 CPLX2Q6PUV4 134 aaKnown RBP13.91□□□□□ -0.18
CLTC-215ENST00000621829 ERLIN1O75477 346 aa13.91□□□□□ -0.18
CLTC-215ENST00000621829 OFD1O75665 1012 aa13.91□□□□□ -0.18
CLTC-215ENST00000621829 SMARCE1Q969G3 411 aa13.9□□□□□ -0.18
CLTC-215ENST00000621829 GTF2F1P35269 517 aaKnown RBP eCLIP13.89□□□□□ -0.191e-9■■■□□ 18.6
CLTC-215ENST00000621829 PKD2Q13563 968 aa13.89□□□□□ -0.19
CLTC-215ENST00000621829 SEPT7Q16181 437 aaKnown RBP13.89□□□□□ -0.19
CLTC-215ENST00000621829 FIBPO43427 364 aa13.89□□□□□ -0.19
CLTC-215ENST00000621829 MSH5O43196 834 aa13.89□□□□□ -0.19
CLTC-215ENST00000621829 HDAC5Q9UQL6 1122 aa13.89□□□□□ -0.19
CLTC-215ENST00000621829 CEBPZQ03701 1054 aaKnown RBP13.89□□□□□ -0.19
CLTC-215ENST00000621829 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.89□□□□□ -0.19
CLTC-215ENST00000621829 GOLGA6L10A0A0M3HER8 536 aa13.89□□□□□ -0.19
CLTC-215ENST00000621829 CHMP7Q8WUX9 453 aaPredicted RBP13.88□□□□□ -0.19
CLTC-215ENST00000621829 DDX19BQ9UMR2 479 aa13.88□□□□□ -0.19
CLTC-215ENST00000621829 KINO60870 393 aaKnown RBP13.88□□□□□ -0.19
CLTC-215ENST00000621829 NFXL1Q6ZNB6 911 aa13.88□□□□□ -0.19
CLTC-215ENST00000621829 ZSCAN30Q86W11 494 aa13.88□□□□□ -0.19
CLTC-215ENST00000621829 ERLIN2O94905 339 aa13.88□□□□□ -0.19
CLTC-215ENST00000621829 SERPINC1P01008 464 aa13.87□□□□□ -0.19
CLTC-215ENST00000621829 XPCQ01831 940 aaPredicted RBP13.87□□□□□ -0.19
CLTC-215ENST00000621829 TMCO3Q6UWJ1 677 aa13.87□□□□□ -0.19
CLTC-215ENST00000621829 DDX11Q96FC9 970 aa13.87□□□□□ -0.19
CLTC-215ENST00000621829 RNF20Q5VTR2 975 aa13.87□□□□□ -0.19
CLTC-215ENST00000621829 CCAR1Q8IX12 1150 aaKnown RBP13.87□□□□□ -0.19
CLTC-215ENST00000621829 CCDC181Q5TID7 509 aa13.87□□□□□ -0.19
CLTC-215ENST00000621829 PRKRIP1Q9H875 184 aaPredicted RBP13.87□□□□□ -0.19
CLTC-215ENST00000621829 RBM33Q96EV2 1170 aaKnown RBP13.87□□□□□ -0.19
CLTC-215ENST00000621829 RAD21O60216 631 aa13.86□□□□□ -0.19
CLTC-215ENST00000621829 CCDC192P0DO97 292 aa13.86□□□□□ -0.19
CLTC-215ENST00000621829 LRRFIP2Q9Y608 721 aaKnown RBP13.86□□□□□ -0.19
CLTC-215ENST00000621829 SHTN1A0MZ66 631 aa13.86□□□□□ -0.19
CLTC-215ENST00000621829 PANK1Q8TE04 598 aa13.86□□□□□ -0.19
CLTC-215ENST00000621829 TIGD1Q96MW7 591 aa13.86□□□□□ -0.19
CLTC-215ENST00000621829 MPHOSPH9Q99550 1183 aa13.86□□□□□ -0.19
CLTC-215ENST00000621829 ARHGAP35Q9NRY4 1499 aa13.86□□□□□ -0.19
CLTC-215ENST00000621829 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
CLTC-215ENST00000621829 TCEAL9Q9UHQ7 104 aa13.85□□□□□ -0.19
CLTC-215ENST00000621829 LMOD3Q0VAK6 560 aa13.85□□□□□ -0.19
CLTC-215ENST00000621829 FILIP1LQ4L180 1135 aa13.85□□□□□ -0.19
CLTC-215ENST00000621829 NF2P35240 595 aa13.85□□□□□ -0.19
CLTC-215ENST00000621829 RNF187Q5TA31 235 aaPredicted RBP13.84□□□□□ -0.19
CLTC-215ENST00000621829 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
CLTC-215ENST00000621829 UBXN4Q92575 508 aa13.84□□□□□ -0.19
CLTC-215ENST00000621829 TNMDQ9H2S6 317 aa13.84□□□□□ -0.19
CLTC-215ENST00000621829 EIF3AQ14152 1382 aaKnown RBP13.84□□□□□ -0.19
CLTC-215ENST00000621829 IFIT2P09913 472 aaKnown RBP13.83□□□□□ -0.19
CLTC-215ENST00000621829 NOL10Q9BSC4 688 aaKnown RBP13.83□□□□□ -0.2
CLTC-215ENST00000621829 PANK3Q9H999 370 aa13.83□□□□□ -0.2
CLTC-215ENST00000621829 CFAP45Q9UL16 551 aa13.83□□□□□ -0.2
CLTC-215ENST00000621829 MNAT1P51948 309 aa13.82□□□□□ -0.2
CLTC-215ENST00000621829 SAFBQ15424 915 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLTC-215ENST00000621829 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
CLTC-215ENST00000621829 APAF1O14727 1248 aa13.82□□□□□ -0.2
CLTC-215ENST00000621829 NECTIN2Q92692 538 aa13.82□□□□□ -0.2
CLTC-215ENST00000621829 CDC45O75419 566 aa13.82□□□□□ -0.2
CLTC-215ENST00000621829 SRRTQ9BXP5 876 aaKnown RBP13.82□□□□□ -0.2
CLTC-215ENST00000621829 TRDNQ13061 729 aa13.82□□□□□ -0.2
CLTC-215ENST00000621829 NEK4P51957 841 aa13.81□□□□□ -0.2
CLTC-215ENST00000621829 MCM4P33991 863 aa13.81□□□□□ -0.2
CLTC-215ENST00000621829 MAGEC2Q9UBF1 373 aaPredicted RBP13.81□□□□□ -0.2
CLTC-215ENST00000621829 PPFIBP1Q86W92 1011 aa13.81□□□□□ -0.2
CLTC-215ENST00000621829 SYCE3A1L190 88 aa13.81□□□□□ -0.2
CLTC-215ENST00000621829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.81□□□□□ -0.22e-6■■■□□ 15.8
CLTC-215ENST00000621829 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
CLTC-215ENST00000621829 KANK1Q14678 1352 aa13.81□□□□□ -0.2
CLTC-215ENST00000621829 BACH2Q9BYV9 841 aa13.8□□□□□ -0.2
CLTC-215ENST00000621829 G3V3G9 751 aa13.8□□□□□ -0.2
CLTC-215ENST00000621829 DCAF8Q5TAQ9 597 aa13.8□□□□□ -0.2
CLTC-215ENST00000621829 FILIP1Q7Z7B0 1213 aa13.8□□□□□ -0.2
CLTC-215ENST00000621829 DHX16O60231 1041 aaKnown RBP13.8□□□□□ -0.2
CLTC-215ENST00000621829 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
CLTC-215ENST00000621829 CRACR2AQ9BSW2 395 aa13.8□□□□□ -0.2
CLTC-215ENST00000621829 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
CLTC-215ENST00000621829 DNAAF4Q8WXU2 420 aa13.79□□□□□ -0.2
CLTC-215ENST00000621829 ZNHIT6Q9NWK9 470 aaKnown RBP13.79□□□□□ -0.2
CLTC-215ENST00000621829 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
CLTC-215ENST00000621829 ERICH2A1L162 156 aa13.78□□□□□ -0.2
CLTC-215ENST00000621829 RABEP1Q15276 862 aa13.78□□□□□ -0.2
CLTC-215ENST00000621829 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
CLTC-215ENST00000621829 PTPN14Q15678 1187 aa13.78□□□□□ -0.2
CLTC-215ENST00000621829 LTV1Q96GA3 475 aaPredicted RBP13.78□□□□□ -0.2
CLTC-215ENST00000621829 LMAN1P49257 510 aa13.78□□□□□ -0.2
CLTC-215ENST00000621829 LRRFIP1Q32MZ4 808 aaKnown RBP13.77□□□□□ -0.2
CLTC-215ENST00000621829 NGEFQ8N5V2 710 aa13.77□□□□□ -0.21
CLTC-215ENST00000621829 KIF7Q2M1P5 1343 aa13.77□□□□□ -0.21
CLTC-215ENST00000621829 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.21
CLTC-215ENST00000621829 TMX1Q9H3N1 280 aa13.77□□□□□ -0.21
CLTC-215ENST00000621829 CASQ1P31415 396 aa13.76□□□□□ -0.21
CLTC-215ENST00000621829 AKNAQ7Z591 1439 aa13.76□□□□□ -0.21
CLTC-215ENST00000621829 IQCEQ6IPM2 695 aa13.76□□□□□ -0.21
CLTC-215ENST00000621829 TMX4Q9H1E5 349 aaPredicted RBP13.76□□□□□ -0.21
CLTC-215ENST00000621829 K7ELQ4 463 aaPredicted RBP13.76□□□□□ -0.21
CLTC-215ENST00000621829 ATP2B1P20020 1258 aa13.76□□□□□ -0.21
CLTC-215ENST00000621829 CCDC113Q9H0I3 377 aa13.76□□□□□ -0.21
CLTC-215ENST00000621829 CLGNO14967 610 aa13.76□□□□□ -0.21
CLTC-215ENST00000621829 GBP2P32456 591 aaPredicted RBP13.76□□□□□ -0.21
CLTC-215ENST00000621829 BCCIPQ9P287 314 aaKnown RBP eCLIP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms