RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
TARDBP-224ENST00000621573 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
TARDBP-224ENST00000621573 LOC105371045A0A1W2PR82 267 aa13.02□□□□□ -0.33
TARDBP-224ENST00000621573 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.33
TARDBP-224ENST00000621573 KIAA0556O60303 1618 aa13.02□□□□□ -0.33
TARDBP-224ENST00000621573 MDM2Q00987 491 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-224ENST00000621573 PDE4DQ08499 809 aa13□□□□□ -0.33
TARDBP-224ENST00000621573 SWT1Q5T5J6 900 aaKnown RBP13□□□□□ -0.33
TARDBP-224ENST00000621573 SAMD7Q7Z3H4 446 aa13□□□□□ -0.33
TARDBP-224ENST00000621573 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
TARDBP-224ENST00000621573 REPIN1Q9BWE0 567 aaKnown RBP12.99□□□□□ -0.33
TARDBP-224ENST00000621573 WNT2BQ93097 391 aa12.98□□□□□ -0.33
TARDBP-224ENST00000621573 TMUB1Q9BVT8 246 aa12.98□□□□□ -0.33
TARDBP-224ENST00000621573 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
TARDBP-224ENST00000621573 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
TARDBP-224ENST00000621573 HDGFP51858 240 aaKnown RBP12.97□□□□□ -0.33
TARDBP-224ENST00000621573 TTLL12Q14166 644 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-224ENST00000621573 ANKK1Q8NFD2 765 aa12.97□□□□□ -0.33
TARDBP-224ENST00000621573 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-224ENST00000621573 CLCN1P35523 988 aa12.96□□□□□ -0.33
TARDBP-224ENST00000621573 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
TARDBP-224ENST00000621573 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
TARDBP-224ENST00000621573 KCTD12Q96CX2 325 aaKnown RBP12.95□□□□□ -0.34
TARDBP-224ENST00000621573 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
TARDBP-224ENST00000621573 PLB1Q6P1J6 1458 aa12.94□□□□□ -0.34
TARDBP-224ENST00000621573 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
TARDBP-224ENST00000621573 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-224ENST00000621573 SOWAHBA6NEL2 793 aa12.93□□□□□ -0.34
TARDBP-224ENST00000621573 BCAMP50895 628 aa12.93□□□□□ -0.34
TARDBP-224ENST00000621573 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-224ENST00000621573 SAMD9Q5K651 1589 aa12.93□□□□□ -0.34
TARDBP-224ENST00000621573 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
TARDBP-224ENST00000621573 UHRF1BP1LA0JNW5 1464 aa12.92□□□□□ -0.34
TARDBP-224ENST00000621573 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
TARDBP-224ENST00000621573 ADCY10Q96PN6 1610 aa12.91□□□□□ -0.34
TARDBP-224ENST00000621573 ARHGAP35Q9NRY4 1499 aa12.91□□□□□ -0.34
TARDBP-224ENST00000621573 CLIP1P30622 1438 aa12.91□□□□□ -0.34
TARDBP-224ENST00000621573 THSD4Q6ZMP0 1018 aa12.91□□□□□ -0.34
TARDBP-224ENST00000621573 ABCC2Q92887 1545 aa12.91□□□□□ -0.34
TARDBP-224ENST00000621573 RNF40O75150 1001 aa12.9□□□□□ -0.34
TARDBP-224ENST00000621573 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-224ENST00000621573 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
TARDBP-224ENST00000621573 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-224ENST00000621573 FAM217BQ9NTX9 383 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-224ENST00000621573 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
TARDBP-224ENST00000621573 NEUROD2Q15784 382 aa12.89□□□□□ -0.35
TARDBP-224ENST00000621573 MMRN1Q13201 1228 aa12.88□□□□□ -0.35
TARDBP-224ENST00000621573 RNF166Q96A37 237 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-224ENST00000621573 ABCA8O94911 1581 aa12.87□□□□□ -0.35
TARDBP-224ENST00000621573 SLC10A3P09131 477 aa12.87□□□□□ -0.35
TARDBP-224ENST00000621573 SSTR3P32745 418 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-224ENST00000621573 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
TARDBP-224ENST00000621573 FAM69CQ0P6D2 419 aa12.87□□□□□ -0.35
TARDBP-224ENST00000621573 SULF1Q8IWU6 871 aa12.87□□□□□ -0.35
TARDBP-224ENST00000621573 KDM4CQ9H3R0 1056 aa12.87□□□□□ -0.35
TARDBP-224ENST00000621573 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
TARDBP-224ENST00000621573 CEP162Q5TB80 1403 aa12.87□□□□□ -0.35
TARDBP-224ENST00000621573 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
TARDBP-224ENST00000621573 KDM5BQ9UGL1 1544 aa12.86□□□□□ -0.35
TARDBP-224ENST00000621573 MS4A1P11836 297 aa12.85□□□□□ -0.35
TARDBP-224ENST00000621573 TSR3Q9UJK0 312 aaKnown RBP12.85□□□□□ -0.35
TARDBP-224ENST00000621573 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
TARDBP-224ENST00000621573 RDH13Q8NBN7 331 aa12.84□□□□□ -0.35
TARDBP-224ENST00000621573 WBP1LQ9NX94 342 aa12.84□□□□□ -0.35
TARDBP-224ENST00000621573 CD46P15529 392 aa12.83□□□□□ -0.36
TARDBP-224ENST00000621573 PPP4CP60510 307 aa12.83□□□□□ -0.36
TARDBP-224ENST00000621573 MAPKBP1O60336 1514 aa12.83□□□□□ -0.36
TARDBP-224ENST00000621573 RAPGEF6Q8TEU7 1601 aa12.82□□□□□ -0.36
TARDBP-224ENST00000621573 PTPN5P54829 565 aa12.82□□□□□ -0.36
TARDBP-224ENST00000621573 RSPH4AQ5TD94 716 aa12.82□□□□□ -0.36
TARDBP-224ENST00000621573 ATP10BO94823 1461 aa12.82□□□□□ -0.36
TARDBP-224ENST00000621573 NUP153P49790 1475 aaKnown RBP12.81□□□□□ -0.36
TARDBP-224ENST00000621573 PLEKHD1A6NEE1 506 aa12.81□□□□□ -0.36
TARDBP-224ENST00000621573 ABCC10Q5T3U5 1492 aa12.8□□□□□ -0.36
TARDBP-224ENST00000621573 NECTIN2Q92692 538 aa12.8□□□□□ -0.36
TARDBP-224ENST00000621573 CFHP08603 1231 aa12.79□□□□□ -0.36
TARDBP-224ENST00000621573 ZCCHC11Q5TAX3 1644 aaKnown RBP12.79□□□□□ -0.36
TARDBP-224ENST00000621573 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
TARDBP-224ENST00000621573 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
TARDBP-224ENST00000621573 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
TARDBP-224ENST00000621573 GCGRP47871 477 aa12.77□□□□□ -0.37
TARDBP-224ENST00000621573 FAM117AQ9C073 453 aa12.77□□□□□ -0.37
TARDBP-224ENST00000621573 CASKIN1Q8WXD9 1431 aa12.77□□□□□ -0.37
TARDBP-224ENST00000621573 APLP1P51693 650 aa12.75□□□□□ -0.37
TARDBP-224ENST00000621573 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
TARDBP-224ENST00000621573 HECW1Q76N89 1606 aa12.74□□□□□ -0.37
TARDBP-224ENST00000621573 EPRSP07814 1512 aaKnown RBP12.74□□□□□ -0.37
TARDBP-224ENST00000621573 CDK13Q14004 1512 aaKnown RBP12.74□□□□□ -0.37
TARDBP-224ENST00000621573 KMT5BQ4FZB7 885 aa12.73□□□□□ -0.37
TARDBP-224ENST00000621573 DIP2BQ9P265 1576 aa12.73□□□□□ -0.37
TARDBP-224ENST00000621573 NYAP1Q6ZVC0 841 aa12.72□□□□□ -0.37
TARDBP-224ENST00000621573 FYCO1Q9BQS8 1478 aa12.72□□□□□ -0.37
TARDBP-224ENST00000621573 ACTN4O43707 911 aaKnown RBP12.71□□□□□ -0.37
TARDBP-224ENST00000621573 DDRGK1Q96HY6 314 aa12.71□□□□□ -0.37
TARDBP-224ENST00000621573 PRR14Q9BWN1 585 aa12.71□□□□□ -0.37
TARDBP-224ENST00000621573 PCF11O94913 1555 aaKnown RBP12.71□□□□□ -0.37
TARDBP-224ENST00000621573 PLEKHG3A1L390 1219 aa12.7□□□□□ -0.38
TARDBP-224ENST00000621573 KDM4AO75164 1064 aa12.7□□□□□ -0.38
TARDBP-224ENST00000621573 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
TARDBP-224ENST00000621573 FUT2Q10981 343 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms