RNA–Protein interactions for RNA: ENST00000621218.4

PLP1-223, Transcript of proteolipid protein 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene PLP1, Length 3,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLP1-223	ENST00000621218	SCAF11	Q99590	1463 aa	Known RBP	11.61	□□□□□ -0.55
PLP1-223	ENST00000621218	TCP11L2	Q8N4U5	519 aa		11.61	□□□□□ -0.55
PLP1-223	ENST00000621218	JPH4	Q96JJ6	628 aa		11.61	□□□□□ -0.55
PLP1-223	ENST00000621218	PDCL3	Q9H2J4	239 aa		11.61	□□□□□ -0.55
PLP1-223	ENST00000621218	MVP	Q14764	893 aa	Known RBP	11.6	□□□□□ -0.55
PLP1-223	ENST00000621218	PHF23	Q9BUL5	403 aa	Predicted RBP	11.6	□□□□□ -0.55
PLP1-223	ENST00000621218	TPM2	P07951	284 aa		11.6	□□□□□ -0.55
PLP1-223	ENST00000621218	CEP152	O94986	1710 aa		11.6	□□□□□ -0.55
PLP1-223	ENST00000621218	SYCP2	Q9BX26	1530 aa		11.6	□□□□□ -0.55
PLP1-223	ENST00000621218	SHPRH	Q149N8	1683 aa		11.59	□□□□□ -0.55
PLP1-223	ENST00000621218	POLR3A	O14802	1390 aa	Predicted RBP	11.59	□□□□□ -0.55
PLP1-223	ENST00000621218	PLEKHG5	O94827	1062 aa		11.59	□□□□□ -0.55
PLP1-223	ENST00000621218	CD2BP2	O95400	341 aa	Known RBP	11.58	□□□□□ -0.56
PLP1-223	ENST00000621218	TNNT2	P45379	298 aa	Predicted RBP	11.58	□□□□□ -0.56
PLP1-223	ENST00000621218	RAB3GAP1	Q15042	981 aa		11.58	□□□□□ -0.56
PLP1-223	ENST00000621218	KDM5A	P29375	1690 aa	Known RBP	11.58	□□□□□ -0.56
PLP1-223	ENST00000621218	SCAPER	Q9BY12	1400 aa		11.58	□□□□□ -0.56
PLP1-223	ENST00000621218	RSPH4A	Q5TD94	716 aa		11.58	□□□□□ -0.56
PLP1-223	ENST00000621218	SMC5	Q8IY18	1101 aa		11.58	□□□□□ -0.56
PLP1-223	ENST00000621218	CARMIL2	Q6F5E8	1435 aa		11.58	□□□□□ -0.56
PLP1-223	ENST00000621218	RUNDC1	Q96C34	613 aa		11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	FOXD4L1	Q9NU39	408 aa		11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	PREX2	Q70Z35	1606 aa		11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	IQSEC2	Q5JU85	1478 aa		11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	RBM25	P49756	843 aa	Known RBP	11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	RIPK4	P57078	832 aa		11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	FBLN2	P98095	1184 aa		11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	SNX21	Q969T3	373 aa		11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	KIF2C	Q99661	725 aa		11.57	□□□□□ -0.56
PLP1-223	ENST00000621218	RBM10	P98175	930 aa	Known RBP	11.56	□□□□□ -0.56
PLP1-223	ENST00000621218	WDR63	Q8IWG1	891 aa		11.56	□□□□□ -0.56
PLP1-223	ENST00000621218	DZIP1L	Q8IYY4	767 aa	Known RBP	11.56	□□□□□ -0.56
PLP1-223	ENST00000621218	PPP1R9B	Q96SB3	815 aa		11.56	□□□□□ -0.56
PLP1-223	ENST00000621218	ERVK-7	P63135	1459 aa		11.56	□□□□□ -0.56
PLP1-223	ENST00000621218	SPHKAP	Q2M3C7	1700 aa		11.55	□□□□□ -0.56
PLP1-223	ENST00000621218	MAST1	Q9Y2H9	1570 aa		11.55	□□□□□ -0.56
PLP1-223	ENST00000621218	HDAC1	Q13547	482 aa	Predicted RBP	11.55	□□□□□ -0.56
PLP1-223	ENST00000621218	ZKSCAN2	Q63HK3	967 aa		11.55	□□□□□ -0.56
PLP1-223	ENST00000621218	ZSCAN30	Q86W11	494 aa		11.55	□□□□□ -0.56
PLP1-223	ENST00000621218	FTSJ3	Q8IY81	847 aa	Known RBP	11.55	□□□□□ -0.56
PLP1-223	ENST00000621218	SHROOM2	Q13796	1616 aa		11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	OFD1	O75665	1012 aa		11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	TRIM27	P14373	513 aa		11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	NASP	P49321	788 aa	Predicted RBP	11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	GBP4	Q96PP9	640 aa		11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	PRDM4	Q9UKN5	801 aa		11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	CCDC173	Q0VFZ6	552 aa		11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	AK9	Q5TCS8	1911 aa		11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	HSP90AB1	P08238	724 aa	Known RBP	11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	TTC37	Q6PGP7	1564 aa		11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.54	□□□□□ -0.56
PLP1-223	ENST00000621218	TSR2	Q969E8	191 aa	Known RBP	11.53	□□□□□ -0.56
PLP1-223	ENST00000621218	RBM42	Q9BTD8	480 aa	Known RBP	11.53	□□□□□ -0.56
PLP1-223	ENST00000621218	SSFA2	P28290	1259 aa		11.53	□□□□□ -0.56
PLP1-223	ENST00000621218	CFAP70	Q5T0N1	1121 aa		11.53	□□□□□ -0.56
PLP1-223	ENST00000621218	DUOX2	Q9NRD8	1548 aa		11.53	□□□□□ -0.56
PLP1-223	ENST00000621218	KANK1	Q14678	1352 aa		11.53	□□□□□ -0.56
PLP1-223	ENST00000621218	ITPRIP	Q8IWB1	547 aa		11.52	□□□□□ -0.57
PLP1-223	ENST00000621218	CALD1	Q05682	793 aa	Known RBP	11.52	□□□□□ -0.57
PLP1-223	ENST00000621218	CCDC27	Q2M243	656 aa		11.52	□□□□□ -0.57
PLP1-223	ENST00000621218	MORC1	Q86VD1	984 aa		11.52	□□□□□ -0.57
PLP1-223	ENST00000621218	LNPK	Q9C0E8	428 aa		11.52	□□□□□ -0.57
PLP1-223	ENST00000621218	ARHGAP5	Q13017	1502 aa		11.51	□□□□□ -0.57
PLP1-223	ENST00000621218	MTHFS	P49914	203 aa		11.51	□□□□□ -0.57
PLP1-223	ENST00000621218	GAS2L2	Q8NHY3	880 aa		11.51	□□□□□ -0.57
PLP1-223	ENST00000621218	SSH1	Q8WYL5	1049 aa		11.51	□□□□□ -0.57
PLP1-223	ENST00000621218	SMC4	Q9NTJ3	1288 aa		11.51	□□□□□ -0.57
PLP1-223	ENST00000621218	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.51	□□□□□ -0.57
PLP1-223	ENST00000621218	FAM13B	Q9NYF5	915 aa		11.5	□□□□□ -0.57
PLP1-223	ENST00000621218	CLTCL1	P53675	1640 aa		11.5	□□□□□ -0.57
PLP1-223	ENST00000621218	EXOSC9	Q06265	439 aa	Known RBP	11.5	□□□□□ -0.57
PLP1-223	ENST00000621218	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.5	□□□□□ -0.57
PLP1-223	ENST00000621218	NSD3	Q9BZ95	1437 aa		11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	MSN	P26038	577 aa	Known RBP	11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	NUCB1	Q02818	461 aa		11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	TMEM57	Q8N5G2	664 aa		11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	ZBTB40	Q9NUA8	1239 aa		11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	DDX19B	Q9UMR2	479 aa		11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	DDX49	Q9Y6V7	483 aa	Known RBP	11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	KLHL40	Q2TBA0	621 aa		11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	ATF7IP	Q6VMQ6	1270 aa		11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	SLC12A5	Q9H2X9	1139 aa		11.49	□□□□□ -0.57
PLP1-223	ENST00000621218		K7ELQ4	463 aa	Predicted RBP	11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	NOB1	Q9ULX3	412 aa	Known RBP	11.49	□□□□□ -0.57
PLP1-223	ENST00000621218	BAG4	O95429	457 aa	Known RBP	11.48	□□□□□ -0.57
PLP1-223	ENST00000621218	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.48	□□□□□ -0.57
PLP1-223	ENST00000621218	CLEC17A	Q6ZS10	378 aa		11.48	□□□□□ -0.57
PLP1-223	ENST00000621218	TRPM2	O94759	1503 aa		11.48	□□□□□ -0.57
PLP1-223	ENST00000621218	XPC	Q01831	940 aa	Predicted RBP	11.48	□□□□□ -0.57
PLP1-223	ENST00000621218	ZNF518A	Q6AHZ1	1483 aa		11.48	□□□□□ -0.57
PLP1-223	ENST00000621218	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.47	□□□□□ -0.57
PLP1-223	ENST00000621218	ADGRF5	Q8IZF2	1346 aa		11.47	□□□□□ -0.57
PLP1-223	ENST00000621218	TERF1	P54274	439 aa		11.47	□□□□□ -0.57
PLP1-223	ENST00000621218	CHD1L	Q86WJ1	897 aa		11.47	□□□□□ -0.57
PLP1-223	ENST00000621218	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
PLP1-223	ENST00000621218	RBSN	Q9H1K0	784 aa		11.46	□□□□□ -0.57
PLP1-223	ENST00000621218	NOL7	Q9UMY1	257 aa	Known RBP	11.46	□□□□□ -0.57
PLP1-223	ENST00000621218	PTPRT	O14522	1441 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms