RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PLXNC1O60486 1568 aa10.47□□□□□ -0.73
PTPDC1-204ENST00000620992 E9PSI1 815 aa10.47□□□□□ -0.73
PTPDC1-204ENST00000620992 ASXL1Q8IXJ9 1541 aa10.47□□□□□ -0.73
PTPDC1-204ENST00000620992 ATP10AO60312 1499 aa10.47□□□□□ -0.73
PTPDC1-204ENST00000620992 TMEM132EQ6IEE7 984 aa10.47□□□□□ -0.73
PTPDC1-204ENST00000620992 COG6Q9Y2V7 657 aa10.47□□□□□ -0.73
PTPDC1-204ENST00000620992 INSRP06213 1382 aa10.46□□□□□ -0.73
PTPDC1-204ENST00000620992 KDM2BQ8NHM5 1336 aa10.46□□□□□ -0.73
PTPDC1-204ENST00000620992 ITPRIPQ8IWB1 547 aa10.46□□□□□ -0.74
PTPDC1-204ENST00000620992 KLHL34Q8N239 644 aa10.46□□□□□ -0.74
PTPDC1-204ENST00000620992 STAC3Q96MF2 364 aa10.46□□□□□ -0.74
PTPDC1-204ENST00000620992 DMRT2Q9Y5R5 561 aa10.46□□□□□ -0.74
PTPDC1-204ENST00000620992 PANK1Q8TE04 598 aa10.46□□□□□ -0.74
PTPDC1-204ENST00000620992 CARD14Q9BXL6 1004 aa10.46□□□□□ -0.74
PTPDC1-204ENST00000620992 CENPJQ9HC77 1338 aaPredicted RBP10.46□□□□□ -0.74
PTPDC1-204ENST00000620992 LAMC1P11047 1609 aa10.45□□□□□ -0.74
PTPDC1-204ENST00000620992 ZNF521Q96K83 1311 aa10.45□□□□□ -0.74
PTPDC1-204ENST00000620992 SLC12A5Q9H2X9 1139 aa10.44□□□□□ -0.74
PTPDC1-204ENST00000620992 EVA1CP58658 441 aa10.44□□□□□ -0.74
PTPDC1-204ENST00000620992 BECN1Q14457 450 aa10.44□□□□□ -0.74
PTPDC1-204ENST00000620992 ZRSR1Q15695 479 aaKnown RBP10.44□□□□□ -0.74
PTPDC1-204ENST00000620992 CASC1Q6TDU7 716 aa10.44□□□□□ -0.74
PTPDC1-204ENST00000620992 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
PTPDC1-204ENST00000620992 PHF23Q9BUL5 403 aaPredicted RBP10.44□□□□□ -0.74
PTPDC1-204ENST00000620992 NFKBIBQ15653 356 aa10.43□□□□□ -0.74
PTPDC1-204ENST00000620992 PIK3C2GO75747 1445 aa10.43□□□□□ -0.74
PTPDC1-204ENST00000620992 C8orf34Q49A92 452 aa10.43□□□□□ -0.74
PTPDC1-204ENST00000620992 TERF2IPQ9NYB0 399 aa10.43□□□□□ -0.74
PTPDC1-204ENST00000620992 ABCC1P33527 1531 aa10.43□□□□□ -0.74
PTPDC1-204ENST00000620992 NKTRP30414 1462 aaKnown RBP10.43□□□□□ -0.74
PTPDC1-204ENST00000620992 NOL8Q76FK4 1167 aaKnown RBP10.43□□□□□ -0.74
PTPDC1-204ENST00000620992 CLSTN1O94985 981 aa10.42□□□□□ -0.74
PTPDC1-204ENST00000620992 GORABQ5T7V8 394 aa10.42□□□□□ -0.74
PTPDC1-204ENST00000620992 MADDQ8WXG6 1647 aa10.42□□□□□ -0.74
PTPDC1-204ENST00000620992 SMC4Q9NTJ3 1288 aa10.42□□□□□ -0.74
PTPDC1-204ENST00000620992 IGHDP01880 384 aa10.42□□□□□ -0.74
PTPDC1-204ENST00000620992 WWC1Q8IX03 1113 aa10.42□□□□□ -0.74
PTPDC1-204ENST00000620992 TAF7LQ5H9L4 462 aa10.42□□□□□ -0.74
PTPDC1-204ENST00000620992 EIF2S2P20042 333 aaKnown RBP10.41□□□□□ -0.74
PTPDC1-204ENST00000620992 UGGT1Q9NYU2 1555 aa10.41□□□□□ -0.74
PTPDC1-204ENST00000620992 FRAT2O75474 233 aaPredicted RBP10.41□□□□□ -0.74
PTPDC1-204ENST00000620992 TRPM2O94759 1503 aa10.41□□□□□ -0.74
PTPDC1-204ENST00000620992 ZCCHC11Q5TAX3 1644 aaKnown RBP10.41□□□□□ -0.74
PTPDC1-204ENST00000620992 FANCAO15360 1455 aa10.41□□□□□ -0.74
PTPDC1-204ENST00000620992 CGNL1Q0VF96 1302 aa10.41□□□□□ -0.74
PTPDC1-204ENST00000620992 TCP11L2Q8N4U5 519 aa10.4□□□□□ -0.74
PTPDC1-204ENST00000620992 CLTCL1P53675 1640 aa10.4□□□□□ -0.74
PTPDC1-204ENST00000620992 SYNMO15061 1565 aa10.4□□□□□ -0.74
PTPDC1-204ENST00000620992 HSP90AB1P08238 724 aaKnown RBP10.4□□□□□ -0.74
PTPDC1-204ENST00000620992 STK31Q9BXU1 1019 aa10.4□□□□□ -0.74
PTPDC1-204ENST00000620992 RNF17Q9BXT8 1623 aaKnown RBP10.4□□□□□ -0.74
PTPDC1-204ENST00000620992 MTHFSP49914 203 aa10.4□□□□□ -0.74
PTPDC1-204ENST00000620992 PNNQ9H307 717 aaKnown RBP10.4□□□□□ -0.74
PTPDC1-204ENST00000620992 NSD3Q9BZ95 1437 aa10.4□□□□□ -0.75
PTPDC1-204ENST00000620992 PTMAP06454 111 aaKnown RBP10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 PSME1Q06323 249 aa10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 PTPRTO14522 1441 aa10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 ADGRL1O94910 1474 aa10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 RAPGEF3O95398 923 aa10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 GSE1Q14687 1217 aa10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 TRMT2AQ8IZ69 625 aaKnown RBP10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 RUNDC1Q96C34 613 aa10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 RBM33Q96EV2 1170 aaKnown RBP10.39□□□□□ -0.75
PTPDC1-204ENST00000620992 GOLGA6L22H0YM25 854 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 NPC1L1Q9UHC9 1359 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 NOS1P29475 1434 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 SLKQ9H2G2 1235 aaPredicted RBP10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 PDE3AQ14432 1141 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 ERVK-7P63135 1459 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 IQGAP1P46940 1657 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 ZFYVE16Q7Z3T8 1539 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 G3V3G9 751 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 DCAF8Q5TAQ9 597 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
PTPDC1-204ENST00000620992 SPHKAPQ2M3C7 1700 aa10.37□□□□□ -0.75
PTPDC1-204ENST00000620992 TNNQ9UQP3 1299 aa10.37□□□□□ -0.75
PTPDC1-204ENST00000620992 CFAP65Q6ZU64 1925 aaKnown RBP10.37□□□□□ -0.75
PTPDC1-204ENST00000620992 ATP7AQ04656 1500 aa10.37□□□□□ -0.75
PTPDC1-204ENST00000620992 TOMM22Q9NS69 142 aa10.37□□□□□ -0.75
PTPDC1-204ENST00000620992 SHROOM2Q13796 1616 aa10.37□□□□□ -0.75
PTPDC1-204ENST00000620992 KDM5AP29375 1690 aaKnown RBP10.37□□□□□ -0.75
PTPDC1-204ENST00000620992 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
PTPDC1-204ENST00000620992 VGFO15240 615 aaPredicted RBP10.36□□□□□ -0.75
PTPDC1-204ENST00000620992 HMOX1P09601 288 aa10.36□□□□□ -0.75
PTPDC1-204ENST00000620992 PMFBP1Q8TBY8 1022 aa10.36□□□□□ -0.75
PTPDC1-204ENST00000620992 SLC26A8Q96RN1 970 aa10.36□□□□□ -0.75
PTPDC1-204ENST00000620992 GGNBP2Q9H3C7 697 aa10.36□□□□□ -0.75
PTPDC1-204ENST00000620992 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
PTPDC1-204ENST00000620992 FAM177BA6PVY3 158 aa10.35□□□□□ -0.75
PTPDC1-204ENST00000620992 RARSP54136 660 aaKnown RBP10.35□□□□□ -0.75
PTPDC1-204ENST00000620992 BRPF3Q9ULD4 1205 aa10.35□□□□□ -0.75
PTPDC1-204ENST00000620992 TRIM44Q96DX7 344 aaPredicted RBP10.35□□□□□ -0.75
PTPDC1-204ENST00000620992 SEC24BO95487 1268 aa10.35□□□□□ -0.75
PTPDC1-204ENST00000620992 TEFQ10587 303 aa10.35□□□□□ -0.75
PTPDC1-204ENST00000620992 MEX3CQ5U5Q3 659 aaKnown RBP10.35□□□□□ -0.75
PTPDC1-204ENST00000620992 COG3Q96JB2 828 aa10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 CEP152O94986 1710 aa10.34□□□□□ -0.75
PTPDC1-204ENST00000620992 GOLGA6L4A6NEF3 574 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms