RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 IFT57Q9NWB7 429 aa8.66□□□□□ -1.02
COLCA1-205ENST00000620864 GOLGA6L10A6NI86 522 aa8.66□□□□□ -1.02
COLCA1-205ENST00000620864 TRIM29Q14134 588 aa8.66□□□□□ -1.02
COLCA1-205ENST00000620864 CENPJQ9HC77 1338 aaPredicted RBP8.66□□□□□ -1.02
COLCA1-205ENST00000620864 SYNE3Q6ZMZ3 975 aa8.66□□□□□ -1.02
COLCA1-205ENST00000620864 CRBNQ96SW2 442 aa8.66□□□□□ -1.02
COLCA1-205ENST00000620864 ERLIN1O75477 346 aa8.66□□□□□ -1.02
COLCA1-205ENST00000620864 PKD2Q13563 968 aa8.66□□□□□ -1.02
COLCA1-205ENST00000620864 SMARCA4P51532 1647 aa8.65□□□□□ -1.02
COLCA1-205ENST00000620864 CGNL1Q0VF96 1302 aa8.65□□□□□ -1.02
COLCA1-205ENST00000620864 NGLY1Q96IV0 654 aa8.65□□□□□ -1.02
COLCA1-205ENST00000620864 MBD3O95983 291 aa8.65□□□□□ -1.03
COLCA1-205ENST00000620864 PCMTD1Q96MG8 357 aaPredicted RBP8.65□□□□□ -1.03
COLCA1-205ENST00000620864 PIP4K2AP48426 406 aaPredicted RBP8.65□□□□□ -1.03
COLCA1-205ENST00000620864 IQCEQ6IPM2 695 aa8.65□□□□□ -1.03
COLCA1-205ENST00000620864 ROCK1Q13464 1354 aa8.65□□□□□ -1.03
COLCA1-205ENST00000620864 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.64□□□□□ -1.03
COLCA1-205ENST00000620864 ZKSCAN1P17029 563 aaPredicted RBP8.64□□□□□ -1.03
COLCA1-205ENST00000620864 POLD1P28340 1107 aa8.64□□□□□ -1.03
COLCA1-205ENST00000620864 PDE4AP27815 886 aa8.64□□□□□ -1.03
COLCA1-205ENST00000620864 HSP90AB3PQ58FF7 597 aa8.64□□□□□ -1.03
COLCA1-205ENST00000620864 SMARCE1Q969G3 411 aa8.64□□□□□ -1.03
COLCA1-205ENST00000620864 SMC4Q9NTJ3 1288 aa8.64□□□□□ -1.03
COLCA1-205ENST00000620864 NASPP49321 788 aaPredicted RBP8.64□□□□□ -1.03
COLCA1-205ENST00000620864 NUP155O75694 1391 aa8.64□□□□□ -1.03
COLCA1-205ENST00000620864 EZRP15311 586 aaKnown RBP8.64□□□□□ -1.03
COLCA1-205ENST00000620864 TOP2AP11388 1531 aaKnown RBP8.63□□□□□ -1.03
COLCA1-205ENST00000620864 ANKRD30AQ9BXX3 1397 aa8.63□□□□□ -1.03
COLCA1-205ENST00000620864 LUC7LQ9NQ29 371 aaKnown RBP8.63□□□□□ -1.03
COLCA1-205ENST00000620864 YY1P25490 414 aa8.63□□□□□ -1.03
COLCA1-205ENST00000620864 ODF2Q5BJF6 829 aa8.63□□□□□ -1.03
COLCA1-205ENST00000620864 OLFM4Q6UX06 510 aa8.63□□□□□ -1.03
COLCA1-205ENST00000620864 FHOD3Q2V2M9 1422 aa8.63□□□□□ -1.03
COLCA1-205ENST00000620864 E9PSI1 815 aa8.63□□□□□ -1.03
COLCA1-205ENST00000620864 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
COLCA1-205ENST00000620864 CCDC73Q6ZRK6 1079 aa8.63□□□□□ -1.03
COLCA1-205ENST00000620864 GIMAP7Q8NHV1 300 aa8.63□□□□□ -1.03
COLCA1-205ENST00000620864 PRG4Q92954 1404 aaPredicted RBP8.63□□□□□ -1.03
COLCA1-205ENST00000620864 POGZQ7Z3K3 1410 aa8.62□□□□□ -1.03
COLCA1-205ENST00000620864 BCL11BQ9C0K0 894 aaPredicted RBP8.62□□□□□ -1.03
COLCA1-205ENST00000620864 TXNDC2Q86VQ3 553 aa8.62□□□□□ -1.03
COLCA1-205ENST00000620864 CT47A1Q5JQC4 288 aaPredicted RBP8.62□□□□□ -1.03
COLCA1-205ENST00000620864 TRAK1Q9UPV9 953 aa8.62□□□□□ -1.03
COLCA1-205ENST00000620864 FMN1Q68DA7 1419 aa8.62□□□□□ -1.03
COLCA1-205ENST00000620864 CT47B1P0C2W7 299 aaPredicted RBP8.62□□□□□ -1.03
COLCA1-205ENST00000620864 DDX11Q96FC9 970 aa8.62□□□□□ -1.03
COLCA1-205ENST00000620864 NLRP13Q86W25 1043 aa8.61□□□□□ -1.03
COLCA1-205ENST00000620864 NOL10Q9BSC4 688 aaKnown RBP8.61□□□□□ -1.03
COLCA1-205ENST00000620864 DNAJC5Q9H3Z4 198 aa8.61□□□□□ -1.03
COLCA1-205ENST00000620864 RAPGEF2Q9Y4G8 1499 aa8.61□□□□□ -1.03
COLCA1-205ENST00000620864 SETD5Q9C0A6 1442 aa8.61□□□□□ -1.03
COLCA1-205ENST00000620864 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
COLCA1-205ENST00000620864 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
COLCA1-205ENST00000620864 AMOTL1Q8IY63 956 aa8.61□□□□□ -1.03
COLCA1-205ENST00000620864 POLR3GO15318 223 aaPredicted RBP8.61□□□□□ -1.03
COLCA1-205ENST00000620864 TNNT1P13805 278 aa8.61□□□□□ -1.03
COLCA1-205ENST00000620864 R3HCC1Q9Y3T6 440 aaKnown RBP8.61□□□□□ -1.03
COLCA1-205ENST00000620864 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
COLCA1-205ENST00000620864 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
COLCA1-205ENST00000620864 HMGB2P26583 209 aaKnown RBP8.6□□□□□ -1.03
COLCA1-205ENST00000620864 BICD2Q8TD16 824 aa8.6□□□□□ -1.03
COLCA1-205ENST00000620864 ARHGAP35Q9NRY4 1499 aa8.6□□□□□ -1.03
COLCA1-205ENST00000620864 KIF2AO00139 706 aaPredicted RBP8.6□□□□□ -1.03
COLCA1-205ENST00000620864 BBXQ8WY36 941 aaPredicted RBP8.6□□□□□ -1.03
COLCA1-205ENST00000620864 CALCOCO1Q9P1Z2 691 aa8.6□□□□□ -1.03
COLCA1-205ENST00000620864 CCDC18Q5T9S5 1454 aa8.6□□□□□ -1.03
COLCA1-205ENST00000620864 FGD5Q6ZNL6 1462 aa8.6□□□□□ -1.03
COLCA1-205ENST00000620864 PPM1FP49593 454 aaPredicted RBP8.6□□□□□ -1.03
COLCA1-205ENST00000620864 AXDND1Q5T1B0 1012 aaPredicted RBP8.6□□□□□ -1.03
COLCA1-205ENST00000620864 ANKLE2Q86XL3 938 aa8.6□□□□□ -1.03
COLCA1-205ENST00000620864 HINFPQ9BQA5 517 aa8.6□□□□□ -1.03
COLCA1-205ENST00000620864 MCM2P49736 904 aa8.59□□□□□ -1.03
COLCA1-205ENST00000620864 PLCD3Q8N3E9 789 aa8.59□□□□□ -1.03
COLCA1-205ENST00000620864 KIF15Q9NS87 1388 aa8.59□□□□□ -1.03
COLCA1-205ENST00000620864 ESCO1Q5FWF5 840 aa8.59□□□□□ -1.03
COLCA1-205ENST00000620864 GBP3Q9H0R5 595 aa8.59□□□□□ -1.03
COLCA1-205ENST00000620864 HSP90AB2PQ58FF8 381 aa8.59□□□□□ -1.03
COLCA1-205ENST00000620864 NAP1L1P55209 391 aaKnown RBP8.59□□□□□ -1.03
COLCA1-205ENST00000620864 SAFBQ15424 915 aaKnown RBP eCLIP8.59□□□□□ -1.03
COLCA1-205ENST00000620864 MYCNP04198 464 aaPredicted RBP8.59□□□□□ -1.03
COLCA1-205ENST00000620864 MCM3P25205 808 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 FILIP1LQ4L180 1135 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 THEMISQ8N1K5 641 aaPredicted RBP8.58□□□□□ -1.04
COLCA1-205ENST00000620864 SPATA24Q86W54 205 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 ZBED9Q6R2W3 1325 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 NUTM2GQ5VZR2 741 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 SLC26A8Q96RN1 970 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.58□□□□□ -1.04
COLCA1-205ENST00000620864 GOLGA6L10A0A0M3HER8 536 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 U2AF1L5P0DN76 240 aaPredicted RBP8.58□□□□□ -1.04
COLCA1-205ENST00000620864 U2AF1Q01081 240 aaKnown RBP eCLIP8.58□□□□□ -1.04
COLCA1-205ENST00000620864 C1orf141Q5JVX7 400 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 PLCD4Q9BRC7 762 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 IFT140Q96RY7 1462 aa8.58□□□□□ -1.04
COLCA1-205ENST00000620864 DHX37Q8IY37 1157 aaKnown RBP8.58□□□□□ -1.04
COLCA1-205ENST00000620864 GRIN2BQ13224 1484 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 CPLX1O14810 134 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 OFD1O75665 1012 aa8.57□□□□□ -1.04
COLCA1-205ENST00000620864 MINK1Q8N4C8 1332 aaPredicted RBP8.57□□□□□ -1.04
COLCA1-205ENST00000620864 RAPGEF3O95398 923 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms