RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 CAMSAP1Q5T5Y3 1602 aa10.52□□□□□ -0.72
GDNF-208ENST00000620847 ABCC3O15438 1527 aa10.52□□□□□ -0.73
GDNF-208ENST00000620847 PIK3C2BO00750 1634 aa10.52□□□□□ -0.73
GDNF-208ENST00000620847 RPGRIP1LQ68CZ1 1315 aa10.51□□□□□ -0.73
GDNF-208ENST00000620847 CD109Q6YHK3 1445 aa10.51□□□□□ -0.73
GDNF-208ENST00000620847 BCAR3O75815 825 aa10.51□□□□□ -0.73
GDNF-208ENST00000620847 GSE1Q14687 1217 aa10.51□□□□□ -0.73
GDNF-208ENST00000620847 ARHGEF28Q8N1W1 1705 aaKnown RBP10.51□□□□□ -0.73
GDNF-208ENST00000620847 GLI2P10070 1586 aa10.51□□□□□ -0.73
GDNF-208ENST00000620847 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
GDNF-208ENST00000620847 TRAK1Q9UPV9 953 aa10.51□□□□□ -0.73
GDNF-208ENST00000620847 IQSEC2Q5JU85 1478 aa10.5□□□□□ -0.73
GDNF-208ENST00000620847 CHGAP10645 457 aaKnown RBP10.5□□□□□ -0.73
GDNF-208ENST00000620847 VIRMAQ69YN4 1812 aaKnown RBP10.5□□□□□ -0.73
GDNF-208ENST00000620847 WWC1Q8IX03 1113 aa10.5□□□□□ -0.73
GDNF-208ENST00000620847 NINLQ9Y2I6 1382 aa10.49□□□□□ -0.73
GDNF-208ENST00000620847 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
GDNF-208ENST00000620847 C8orf34Q49A92 452 aa10.49□□□□□ -0.73
GDNF-208ENST00000620847 SLC12A5Q9H2X9 1139 aa10.49□□□□□ -0.73
GDNF-208ENST00000620847 MORC1Q86VD1 984 aa10.49□□□□□ -0.73
GDNF-208ENST00000620847 UBE2Q2Q8WVN8 375 aa10.49□□□□□ -0.73
GDNF-208ENST00000620847 NEXMIFQ5QGS0 1516 aa10.49□□□□□ -0.73
GDNF-208ENST00000620847 GGT6Q6P531 493 aa10.48□□□□□ -0.73
GDNF-208ENST00000620847 PDE3AQ14432 1141 aa10.48□□□□□ -0.73
GDNF-208ENST00000620847 TMEM132EQ6IEE7 984 aa10.48□□□□□ -0.73
GDNF-208ENST00000620847 PUS7Q96PZ0 661 aaKnown RBP10.48□□□□□ -0.73
GDNF-208ENST00000620847 TULP4Q9NRJ4 1543 aa10.48□□□□□ -0.73
GDNF-208ENST00000620847 NPM1P06748 294 aaKnown RBP eCLIP10.47□□□□□ -0.73
GDNF-208ENST00000620847 PHF23Q9BUL5 403 aaPredicted RBP10.47□□□□□ -0.73
GDNF-208ENST00000620847 BRPF3Q9ULD4 1205 aa10.47□□□□□ -0.73
GDNF-208ENST00000620847 EIF5BO60841 1220 aaKnown RBP10.47□□□□□ -0.73
GDNF-208ENST00000620847 RUNDC1Q96C34 613 aa10.47□□□□□ -0.73
GDNF-208ENST00000620847 CGNL1Q0VF96 1302 aa10.46□□□□□ -0.73
GDNF-208ENST00000620847 DIP2CQ9Y2E4 1556 aa10.46□□□□□ -0.74
GDNF-208ENST00000620847 NFKBIBQ15653 356 aa10.46□□□□□ -0.74
GDNF-208ENST00000620847 ANKRD36BQ8N2N9 1353 aa10.45□□□□□ -0.74
GDNF-208ENST00000620847 NEO1Q92859 1461 aa10.45□□□□□ -0.74
GDNF-208ENST00000620847 TNNT2P45379 298 aaPredicted RBP10.45□□□□□ -0.74
GDNF-208ENST00000620847 NSD2O96028 1365 aa10.45□□□□□ -0.74
GDNF-208ENST00000620847 IGHDP01880 384 aa10.45□□□□□ -0.74
GDNF-208ENST00000620847 TCP11L2Q8N4U5 519 aa10.45□□□□□ -0.74
GDNF-208ENST00000620847 ARHGAP31Q2M1Z3 1444 aa10.44□□□□□ -0.74
GDNF-208ENST00000620847 MTHFSP49914 203 aa10.44□□□□□ -0.74
GDNF-208ENST00000620847 WDR63Q8IWG1 891 aa10.44□□□□□ -0.74
GDNF-208ENST00000620847 EVC2Q86UK5 1308 aa10.44□□□□□ -0.74
GDNF-208ENST00000620847 ADGRB2O60241 1585 aa10.44□□□□□ -0.74
GDNF-208ENST00000620847 VGFO15240 615 aaPredicted RBP10.44□□□□□ -0.74
GDNF-208ENST00000620847 RGS3P49796 1198 aa10.44□□□□□ -0.74
GDNF-208ENST00000620847 CCDC27Q2M243 656 aa10.44□□□□□ -0.74
GDNF-208ENST00000620847 RICTORQ6R327 1708 aa10.44□□□□□ -0.74
GDNF-208ENST00000620847 NCBP3Q53F19 620 aaKnown RBP10.44□□□□□ -0.74
GDNF-208ENST00000620847 CLUAP1Q96AJ1 413 aa10.44□□□□□ -0.74
GDNF-208ENST00000620847 MYO5BQ9ULV0 1848 aa10.43□□□□□ -0.74
GDNF-208ENST00000620847 RARSP54136 660 aaKnown RBP10.43□□□□□ -0.74
GDNF-208ENST00000620847 ZFYVE9O95405 1425 aa10.43□□□□□ -0.74
GDNF-208ENST00000620847 RRP7AQ9Y3A4 280 aaKnown RBP10.43□□□□□ -0.74
GDNF-208ENST00000620847 PANK1Q8TE04 598 aa10.43□□□□□ -0.74
GDNF-208ENST00000620847 FRAT1Q92837 279 aaPredicted RBP10.43□□□□□ -0.74
GDNF-208ENST00000620847 CFAP53Q96M91 514 aa10.43□□□□□ -0.74
GDNF-208ENST00000620847 NEUROD2Q15784 382 aa10.42□□□□□ -0.74
GDNF-208ENST00000620847 COG6Q9Y2V7 657 aa10.42□□□□□ -0.74
GDNF-208ENST00000620847 ANKRD26Q9UPS8 1709 aa10.42□□□□□ -0.74
GDNF-208ENST00000620847 CANXP27824 592 aaKnown RBP10.41□□□□□ -0.74
GDNF-208ENST00000620847 AAMPQ13685 434 aa10.41□□□□□ -0.74
GDNF-208ENST00000620847 RAPGEF3O95398 923 aa10.41□□□□□ -0.74
GDNF-208ENST00000620847 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
GDNF-208ENST00000620847 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
GDNF-208ENST00000620847 PREX1Q8TCU6 1659 aa10.41□□□□□ -0.74
GDNF-208ENST00000620847 TMEM131LA2VDJ0 1609 aa10.4□□□□□ -0.74
GDNF-208ENST00000620847 CLTCQ00610 1675 aaKnown RBP10.4□□□□□ -0.74
GDNF-208ENST00000620847 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
GDNF-208ENST00000620847 ABCC11Q96J66 1382 aa10.4□□□□□ -0.74
GDNF-208ENST00000620847 MAPK8IP3Q9UPT6 1336 aa10.4□□□□□ -0.75
GDNF-208ENST00000620847 SLC4A3P48751 1232 aa10.4□□□□□ -0.75
GDNF-208ENST00000620847 CABP2Q9NPB3 220 aa10.4□□□□□ -0.75
GDNF-208ENST00000620847 IDI1Q13907 227 aa10.39□□□□□ -0.75
GDNF-208ENST00000620847 PTPRMP28827 1452 aa10.39□□□□□ -0.75
GDNF-208ENST00000620847 A0A1W2PP64 1363 aa10.39□□□□□ -0.75
GDNF-208ENST00000620847 COL3A1P02461 1466 aaPredicted RBP10.39□□□□□ -0.75
GDNF-208ENST00000620847 RLBP1P12271 317 aa10.38□□□□□ -0.75
GDNF-208ENST00000620847 USP19O94966 1318 aa10.38□□□□□ -0.75
GDNF-208ENST00000620847 SLC52A1Q9NWF4 448 aa10.38□□□□□ -0.75
GDNF-208ENST00000620847 PMFBP1Q8TBY8 1022 aa10.38□□□□□ -0.75
GDNF-208ENST00000620847 MYH16Q9H6N6 1097 aa10.38□□□□□ -0.75
GDNF-208ENST00000620847 MED14O60244 1454 aa10.37□□□□□ -0.75
GDNF-208ENST00000620847 U2AF1L5P0DN76 240 aaPredicted RBP10.37□□□□□ -0.75
GDNF-208ENST00000620847 U2AF1Q01081 240 aaKnown RBP eCLIP10.37□□□□□ -0.75
GDNF-208ENST00000620847 FAM43AQ8N2R8 423 aa10.37□□□□□ -0.75
GDNF-208ENST00000620847 TNNQ9UQP3 1299 aa10.37□□□□□ -0.75
GDNF-208ENST00000620847 CD163L1Q9NR16 1453 aa10.37□□□□□ -0.75
GDNF-208ENST00000620847 PCDHB15Q9Y5E8 787 aa10.37□□□□□ -0.75
GDNF-208ENST00000620847 ZMYM3Q14202 1370 aa10.37□□□□□ -0.75
GDNF-208ENST00000620847 NLRP1Q9C000 1473 aa10.36□□□□□ -0.75
GDNF-208ENST00000620847 YEATS2Q9ULM3 1422 aa10.36□□□□□ -0.75
GDNF-208ENST00000620847 PLEKHF1Q96S99 279 aa10.36□□□□□ -0.75
GDNF-208ENST00000620847 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
GDNF-208ENST00000620847 SAFB2Q14151 953 aaKnown RBP eCLIP10.35□□□□□ -0.75
GDNF-208ENST00000620847 KIF20BQ96Q89 1820 aa10.35□□□□□ -0.75
GDNF-208ENST00000620847 ATAD2Q6PL18 1390 aa10.35□□□□□ -0.75
GDNF-208ENST00000620847 BCL2L13Q9BXK5 485 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms