RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 USP17L8P0C7I0 530 aa12.4□□□□□ -0.42
LPCAT3-213ENST00000620843 PPP4CP60510 307 aa12.4□□□□□ -0.42
LPCAT3-213ENST00000620843 PUS10Q3MIT2 529 aaKnown RBP12.4□□□□□ -0.42
LPCAT3-213ENST00000620843 WNT2BQ93097 391 aa12.4□□□□□ -0.42
LPCAT3-213ENST00000620843 KRTAP3-3Q9BYR6 98 aa12.4□□□□□ -0.42
LPCAT3-213ENST00000620843 KRTAP3-2Q9BYR7 98 aa12.4□□□□□ -0.42
LPCAT3-213ENST00000620843 MORN1Q5T089 497 aa12.39□□□□□ -0.43
LPCAT3-213ENST00000620843 PRR14Q9BWN1 585 aa12.39□□□□□ -0.43
LPCAT3-213ENST00000620843 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
LPCAT3-213ENST00000620843 TRAK2O60296 914 aa12.38□□□□□ -0.43
LPCAT3-213ENST00000620843 PROSER2Q86WR7 435 aaPredicted RBP12.38□□□□□ -0.43
LPCAT3-213ENST00000620843 SYMPKQ92797 1274 aaKnown RBP12.38□□□□□ -0.43
LPCAT3-213ENST00000620843 TSR3Q9UJK0 312 aaKnown RBP12.38□□□□□ -0.43
LPCAT3-213ENST00000620843 ARID3CA6NKF2 412 aa12.37□□□□□ -0.43
LPCAT3-213ENST00000620843 TSC1Q92574 1164 aa12.37□□□□□ -0.43
LPCAT3-213ENST00000620843 SLC27A5Q9Y2P5 690 aa12.37□□□□□ -0.43
LPCAT3-213ENST00000620843 CFAP99D6REC4 459 aa12.36□□□□□ -0.43
LPCAT3-213ENST00000620843 APLP1P51693 650 aa12.36□□□□□ -0.43
LPCAT3-213ENST00000620843 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
LPCAT3-213ENST00000620843 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
LPCAT3-213ENST00000620843 APBB1O00213 710 aa12.34□□□□□ -0.43
LPCAT3-213ENST00000620843 SOCS7O14512 581 aa12.34□□□□□ -0.43
LPCAT3-213ENST00000620843 CTDSPL2Q05D32 466 aa12.34□□□□□ -0.43
LPCAT3-213ENST00000620843 FNBP4Q8N3X1 1017 aaPredicted RBP12.33□□□□□ -0.44
LPCAT3-213ENST00000620843 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
LPCAT3-213ENST00000620843 Q3C1V9 767 aa12.32□□□□□ -0.44
LPCAT3-213ENST00000620843 PRR7Q8TB68 274 aa12.32□□□□□ -0.44
LPCAT3-213ENST00000620843 RETREG3Q86VR2 466 aa12.31□□□□□ -0.44
LPCAT3-213ENST00000620843 WBP1LQ9NX94 342 aa12.31□□□□□ -0.44
LPCAT3-213ENST00000620843 PCDHB3Q9Y5E6 796 aa12.31□□□□□ -0.44
LPCAT3-213ENST00000620843 RNF19BQ6ZMZ0 732 aa12.3□□□□□ -0.44
LPCAT3-213ENST00000620843 ARXQ96QS3 562 aa12.3□□□□□ -0.44
LPCAT3-213ENST00000620843 HMX1Q9NP08 348 aaPredicted RBP12.3□□□□□ -0.44
LPCAT3-213ENST00000620843 BLOC1S3Q6QNY0 202 aa12.29□□□□□ -0.44
LPCAT3-213ENST00000620843 LRRN4Q8WUT4 740 aa12.29□□□□□ -0.44
LPCAT3-213ENST00000620843 GJD4Q96KN9 370 aaPredicted RBP12.29□□□□□ -0.44
LPCAT3-213ENST00000620843 PRM3Q9NNZ6 103 aa12.29□□□□□ -0.44
LPCAT3-213ENST00000620843 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
LPCAT3-213ENST00000620843 ABL2P42684 1182 aa12.28□□□□□ -0.44
LPCAT3-213ENST00000620843 THSD4Q6ZMP0 1018 aa12.28□□□□□ -0.44
LPCAT3-213ENST00000620843 KCTD12Q96CX2 325 aaKnown RBP12.28□□□□□ -0.44
LPCAT3-213ENST00000620843 ARID3AQ99856 593 aa12.28□□□□□ -0.44
LPCAT3-213ENST00000620843 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
LPCAT3-213ENST00000620843 NR1I2O75469 434 aa12.26□□□□□ -0.45
LPCAT3-213ENST00000620843 SCUBE3Q8IX30 993 aa12.26□□□□□ -0.45
LPCAT3-213ENST00000620843 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
LPCAT3-213ENST00000620843 TRIM34Q9BYJ4 488 aa12.25□□□□□ -0.45
LPCAT3-213ENST00000620843 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
LPCAT3-213ENST00000620843 PER1O15534 1290 aaPredicted RBP12.24□□□□□ -0.45
LPCAT3-213ENST00000620843 POTEGQ6S5H5 508 aa12.24□□□□□ -0.45
LPCAT3-213ENST00000620843 USB1Q9BQ65 265 aaKnown RBP12.24□□□□□ -0.45
LPCAT3-213ENST00000620843 ZNF330Q9Y3S2 320 aaPredicted RBP12.24□□□□□ -0.45
LPCAT3-213ENST00000620843 SALL2Q9Y467 1007 aaPredicted RBP12.24□□□□□ -0.45
LPCAT3-213ENST00000620843 FMNL1O95466 1100 aaPredicted RBP12.23□□□□□ -0.45
LPCAT3-213ENST00000620843 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
LPCAT3-213ENST00000620843 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
LPCAT3-213ENST00000620843 THAP11Q96EK4 314 aa12.23□□□□□ -0.45
LPCAT3-213ENST00000620843 DESI1Q6ICB0 168 aa12.22□□□□□ -0.45
LPCAT3-213ENST00000620843 COPS2P61201 443 aa12.21□□□□□ -0.45
LPCAT3-213ENST00000620843 HOMEZQ8IX15 550 aa12.21□□□□□ -0.45
LPCAT3-213ENST00000620843 POTEMA6NI47 508 aa12.2□□□□□ -0.46
LPCAT3-213ENST00000620843 CCDC82Q8N4S0 544 aa12.2□□□□□ -0.46
LPCAT3-213ENST00000620843 EPS8L1Q8TE68 723 aa12.2□□□□□ -0.46
LPCAT3-213ENST00000620843 GPR37L1O60883 481 aa12.18□□□□□ -0.46
LPCAT3-213ENST00000620843 NR6A1Q15406 480 aa12.18□□□□□ -0.46
LPCAT3-213ENST00000620843 LYPD8Q6UX82 237 aa12.18□□□□□ -0.46
LPCAT3-213ENST00000620843 PTPN5P54829 565 aa12.17□□□□□ -0.46
LPCAT3-213ENST00000620843 IRF5Q13568 498 aa12.17□□□□□ -0.46
LPCAT3-213ENST00000620843 NYAP1Q6ZVC0 841 aa12.17□□□□□ -0.46
LPCAT3-213ENST00000620843 POM121CA8CG34 1229 aa12.15□□□□□ -0.46
LPCAT3-213ENST00000620843 JUNDP17535 347 aa12.15□□□□□ -0.46
LPCAT3-213ENST00000620843 SPSB2Q99619 263 aa12.15□□□□□ -0.46
LPCAT3-213ENST00000620843 PLSCR2Q9NRY7 297 aa12.15□□□□□ -0.46
LPCAT3-213ENST00000620843 MSS51Q4VC12 460 aa12.13□□□□□ -0.47
LPCAT3-213ENST00000620843 TLL1O43897 1013 aa12.12□□□□□ -0.47
LPCAT3-213ENST00000620843 FAM160A2Q8N612 972 aaPredicted RBP12.12□□□□□ -0.47
LPCAT3-213ENST00000620843 CCDC97Q96F63 343 aaPredicted RBP12.12□□□□□ -0.47
LPCAT3-213ENST00000620843 MTRQ99707 1265 aa12.12□□□□□ -0.47
LPCAT3-213ENST00000620843 ZPR1O75312 459 aa12.11□□□□□ -0.47
LPCAT3-213ENST00000620843 PTPRNQ16849 979 aa12.11□□□□□ -0.47
LPCAT3-213ENST00000620843 WASHC4Q2M389 1173 aa12.11□□□□□ -0.47
LPCAT3-213ENST00000620843 PRDM9Q9NQV7 894 aa12.1□□□□□ -0.47
LPCAT3-213ENST00000620843 SERPINA10Q9UK55 444 aa12.1□□□□□ -0.47
LPCAT3-213ENST00000620843 DXOO77932 396 aaKnown RBP12.09□□□□□ -0.47
LPCAT3-213ENST00000620843 F12P00748 615 aaPredicted RBP12.09□□□□□ -0.47
LPCAT3-213ENST00000620843 VAC14Q08AM6 782 aa12.09□□□□□ -0.47
LPCAT3-213ENST00000620843 GLMNQ92990 594 aa12.09□□□□□ -0.47
LPCAT3-213ENST00000620843 CALR3Q96L12 384 aaKnown RBP12.09□□□□□ -0.47
LPCAT3-213ENST00000620843 MAP10Q9P2G4 905 aa12.09□□□□□ -0.47
LPCAT3-213ENST00000620843 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
LPCAT3-213ENST00000620843 ADH1BP00325 375 aa12.08□□□□□ -0.48
LPCAT3-213ENST00000620843 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
LPCAT3-213ENST00000620843 CTHP32929 405 aa12.07□□□□□ -0.48
LPCAT3-213ENST00000620843 TJAP1Q5JTD0 557 aa12.07□□□□□ -0.48
LPCAT3-213ENST00000620843 MMP16P51512 607 aa12.06□□□□□ -0.48
LPCAT3-213ENST00000620843 ZNF516Q92618 1163 aa12.06□□□□□ -0.48
LPCAT3-213ENST00000620843 NUDT12Q9BQG2 462 aa12.06□□□□□ -0.48
LPCAT3-213ENST00000620843 IL21Q9HBE4 155 aa12.06□□□□□ -0.48
LPCAT3-213ENST00000620843 CCNYL3P0C7X3 344 aa12.05□□□□□ -0.48
LPCAT3-213ENST00000620843 ADAMTS19Q8TE59 1207 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms