RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.78
PSMB3-212ENST00000620309 NUTM2DQ5VT03 806 aaPredicted RBP10.15□□□□□ -0.78
PSMB3-212ENST00000620309 ADGRF5Q8IZF2 1346 aa10.14□□□□□ -0.79
PSMB3-212ENST00000620309 RBM6P78332 1123 aaKnown RBP10.14□□□□□ -0.79
PSMB3-212ENST00000620309 RGL3Q3MIN7 710 aa10.14□□□□□ -0.79
PSMB3-212ENST00000620309 STAC3Q96MF2 364 aa10.14□□□□□ -0.79
PSMB3-212ENST00000620309 TBX22Q9Y458 520 aa10.14□□□□□ -0.79
PSMB3-212ENST00000620309 ATAD2Q6PL18 1390 aa10.14□□□□□ -0.79
PSMB3-212ENST00000620309 DLC1Q96QB1 1528 aa10.13□□□□□ -0.79
PSMB3-212ENST00000620309 DCAF11Q8TEB1 546 aa10.13□□□□□ -0.79
PSMB3-212ENST00000620309 NALCNQ8IZF0 1738 aa10.13□□□□□ -0.79
PSMB3-212ENST00000620309 NBPF8Q3BBV2 869 aa10.12□□□□□ -0.79
PSMB3-212ENST00000620309 BRINP3Q76B58 766 aa10.12□□□□□ -0.79
PSMB3-212ENST00000620309 ZRANB1Q9UGI0 708 aa10.12□□□□□ -0.79
PSMB3-212ENST00000620309 ADGRB2O60241 1585 aa10.11□□□□□ -0.79
PSMB3-212ENST00000620309 TECPR2O15040 1411 aa10.11□□□□□ -0.79
PSMB3-212ENST00000620309 DCCP43146 1447 aa10.11□□□□□ -0.79
PSMB3-212ENST00000620309 PTCH1Q13635 1447 aa10.11□□□□□ -0.79
PSMB3-212ENST00000620309 C14orf37Q86TY3 774 aa10.11□□□□□ -0.79
PSMB3-212ENST00000620309 QTRT2Q9H974 415 aaKnown RBP10.11□□□□□ -0.79
PSMB3-212ENST00000620309 CADPS2Q86UW7 1296 aa10.1□□□□□ -0.79
PSMB3-212ENST00000620309 C19orf44Q9H6X5 657 aa10.1□□□□□ -0.79
PSMB3-212ENST00000620309 PNPLA6Q8IY17 1366 aa10.1□□□□□ -0.79
PSMB3-212ENST00000620309 MYOM1P52179 1685 aa10.09□□□□□ -0.79
PSMB3-212ENST00000620309 MST1RQ04912 1400 aa10.09□□□□□ -0.79
PSMB3-212ENST00000620309 ROCK2O75116 1388 aaKnown RBP10.09□□□□□ -0.79
PSMB3-212ENST00000620309 NUTM2BA6NNL0 878 aaPredicted RBP10.08□□□□□ -0.8
PSMB3-212ENST00000620309 NUTM2EB1AL46 878 aaPredicted RBP10.08□□□□□ -0.8
PSMB3-212ENST00000620309 NUTM2AQ8IVF1 878 aaPredicted RBP10.08□□□□□ -0.8
PSMB3-212ENST00000620309 AMOTL2Q9Y2J4 779 aa10.08□□□□□ -0.8
PSMB3-212ENST00000620309 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
PSMB3-212ENST00000620309 TOPAZ1Q8N9V7 1692 aa10.07□□□□□ -0.8
PSMB3-212ENST00000620309 USP47Q96K76 1375 aa10.07□□□□□ -0.8
PSMB3-212ENST00000620309 KDM2AQ9Y2K7 1162 aa10.07□□□□□ -0.8
PSMB3-212ENST00000620309 ITSN1Q15811 1721 aa10.07□□□□□ -0.8
PSMB3-212ENST00000620309 ATRNO75882 1429 aa10.07□□□□□ -0.8
PSMB3-212ENST00000620309 PTPRUQ92729 1446 aa10.07□□□□□ -0.8
PSMB3-212ENST00000620309 CDC42BPGQ6DT37 1551 aa10.06□□□□□ -0.8
PSMB3-212ENST00000620309 METP08581 1390 aa10.06□□□□□ -0.8
PSMB3-212ENST00000620309 C8orf37Q96NL8 207 aa10.06□□□□□ -0.8
PSMB3-212ENST00000620309 C14orf93Q9H972 538 aaKnown RBP10.06□□□□□ -0.8
PSMB3-212ENST00000620309 COL22A1Q8NFW1 1626 aaPredicted RBP10.06□□□□□ -0.8
PSMB3-212ENST00000620309 LRPPRCP42704 1394 aaKnown RBP10.05□□□□□ -0.8
PSMB3-212ENST00000620309 ATF3P18847 181 aa10.05□□□□□ -0.8
PSMB3-212ENST00000620309 CCDC125Q86Z20 511 aa10.05□□□□□ -0.8
PSMB3-212ENST00000620309 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
PSMB3-212ENST00000620309 TULP4Q9NRJ4 1543 aa10.05□□□□□ -0.8
PSMB3-212ENST00000620309 ADGRL3Q9HAR2 1447 aa10.05□□□□□ -0.8
PSMB3-212ENST00000620309 FMN2Q9NZ56 1722 aa10.04□□□□□ -0.8
PSMB3-212ENST00000620309 MARF1Q9Y4F3 1742 aaKnown RBP10.04□□□□□ -0.8
PSMB3-212ENST00000620309 SBNO2Q9Y2G9 1366 aa10.04□□□□□ -0.8
PSMB3-212ENST00000620309 KIF1AQ12756 1690 aa10.04□□□□□ -0.8
PSMB3-212ENST00000620309 CFAP70Q5T0N1 1121 aa10.04□□□□□ -0.8
PSMB3-212ENST00000620309 LRRC59Q96AG4 307 aaKnown RBP10.04□□□□□ -0.8
PSMB3-212ENST00000620309 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.04□□□□□ -0.8
PSMB3-212ENST00000620309 EIF3AQ14152 1382 aaKnown RBP10.03□□□□□ -0.8
PSMB3-212ENST00000620309 NBPF1Q3BBV0 1214 aa10.03□□□□□ -0.8
PSMB3-212ENST00000620309 FNBP4Q8N3X1 1017 aaPredicted RBP10.03□□□□□ -0.8
PSMB3-212ENST00000620309 USP32Q8NFA0 1604 aa10.03□□□□□ -0.8
PSMB3-212ENST00000620309 BCL9LQ86UU0 1499 aa10.03□□□□□ -0.8
PSMB3-212ENST00000620309 BRWD3Q6RI45 1802 aa10.02□□□□□ -0.81
PSMB3-212ENST00000620309 ABCC11Q96J66 1382 aa10.01□□□□□ -0.81
PSMB3-212ENST00000620309 TRPC5Q9UL62 973 aaPredicted RBP10.01□□□□□ -0.81
PSMB3-212ENST00000620309 RGPD8O14715 1765 aaPredicted RBP10.01□□□□□ -0.81
PSMB3-212ENST00000620309 BLMP54132 1417 aaPredicted RBP10□□□□□ -0.81
PSMB3-212ENST00000620309 CARD11Q9BXL7 1154 aa10□□□□□ -0.81
PSMB3-212ENST00000620309 STK26Q9P289 416 aa10□□□□□ -0.81
PSMB3-212ENST00000620309 ROBO2Q9HCK4 1378 aa10□□□□□ -0.81
PSMB3-212ENST00000620309 AKAP12Q02952 1782 aa9.99□□□□□ -0.81
PSMB3-212ENST00000620309 DDX17Q92841 729 aaKnown RBP9.99□□□□□ -0.81
PSMB3-212ENST00000620309 POGKQ9P215 609 aa9.99□□□□□ -0.81
PSMB3-212ENST00000620309 USP21Q9UK80 565 aa9.99□□□□□ -0.81
PSMB3-212ENST00000620309 GLI3P10071 1580 aa9.99□□□□□ -0.81
PSMB3-212ENST00000620309 MON2Q7Z3U7 1717 aa9.99□□□□□ -0.81
PSMB3-212ENST00000620309 TMEM132EQ6IEE7 984 aa9.98□□□□□ -0.81
PSMB3-212ENST00000620309 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
PSMB3-212ENST00000620309 PLEKHH1Q9ULM0 1364 aa9.98□□□□□ -0.81
PSMB3-212ENST00000620309 NRKQ7Z2Y5 1582 aa9.97□□□□□ -0.81
PSMB3-212ENST00000620309 ADAMTS2O95450 1211 aa9.97□□□□□ -0.81
PSMB3-212ENST00000620309 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
PSMB3-212ENST00000620309 ATP7BP35670 1465 aa9.97□□□□□ -0.81
PSMB3-212ENST00000620309 C1orf167Q5SNV9 1468 aa9.97□□□□□ -0.81
PSMB3-212ENST00000620309 HSPA5P11021 654 aaKnown RBP9.95□□□□□ -0.82
PSMB3-212ENST00000620309 EIF4G2P78344 907 aaKnown RBP eCLIP9.95□□□□□ -0.82
PSMB3-212ENST00000620309 TESK2Q96S53 571 aa9.95□□□□□ -0.82
PSMB3-212ENST00000620309 TRAK1Q9UPV9 953 aa9.95□□□□□ -0.82
PSMB3-212ENST00000620309 CENPJQ9HC77 1338 aaPredicted RBP9.95□□□□□ -0.82
PSMB3-212ENST00000620309 ANKRD26Q9UPS8 1709 aa9.94□□□□□ -0.82
PSMB3-212ENST00000620309 DEFB132Q7Z7B7 95 aa9.94□□□□□ -0.82
PSMB3-212ENST00000620309 PRAM1Q96QH2 718 aa9.94□□□□□ -0.82
PSMB3-212ENST00000620309 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
PSMB3-212ENST00000620309 SLIT2O94813 1529 aa9.93□□□□□ -0.82
PSMB3-212ENST00000620309 ANKARQ7Z5J8 1434 aa9.93□□□□□ -0.82
PSMB3-212ENST00000620309 ST20-MTHFSA0A0A6YYL1 179 aa9.93□□□□□ -0.82
PSMB3-212ENST00000620309 GJD4Q96KN9 370 aaPredicted RBP9.93□□□□□ -0.82
PSMB3-212ENST00000620309 PXDNQ92626 1479 aa9.92□□□□□ -0.82
PSMB3-212ENST00000620309 WAPLQ7Z5K2 1190 aa9.92□□□□□ -0.82
PSMB3-212ENST00000620309 USP54Q70EL1 1684 aa9.92□□□□□ -0.82
PSMB3-212ENST00000620309 SAFB2Q14151 953 aaKnown RBP eCLIP9.91□□□□□ -0.82
PSMB3-212ENST00000620309 CCDC7Q96M83 1385 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms