RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 C1orf115Q9H7X2 142 aa20.41■□□□□ 0.86
DKC1-213ENST00000620277 INSRP06213 1382 aa20.41■□□□□ 0.86
DKC1-213ENST00000620277 THUMPD2Q9BTF0 503 aaKnown RBP20.4■□□□□ 0.86
DKC1-213ENST00000620277 LNPKQ9C0E8 428 aa20.4■□□□□ 0.86
DKC1-213ENST00000620277 DZIP1LQ8IYY4 767 aaKnown RBP20.4■□□□□ 0.86
DKC1-213ENST00000620277 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.4■□□□□ 0.86
DKC1-213ENST00000620277 MADDQ8WXG6 1647 aa20.39■□□□□ 0.86
DKC1-213ENST00000620277 CLTCL1P53675 1640 aa20.39■□□□□ 0.85
DKC1-213ENST00000620277 SSH1Q8WYL5 1049 aa20.39■□□□□ 0.85
DKC1-213ENST00000620277 ZKSCAN2Q63HK3 967 aa20.38■□□□□ 0.85
DKC1-213ENST00000620277 NOB1Q9ULX3 412 aaKnown RBP20.38■□□□□ 0.85
DKC1-213ENST00000620277 PANK2Q9BZ23 570 aa20.37■□□□□ 0.85
DKC1-213ENST00000620277 TRIM27P14373 513 aa20.36■□□□□ 0.85
DKC1-213ENST00000620277 MVPQ14764 893 aaKnown RBP20.36■□□□□ 0.85
DKC1-213ENST00000620277 MYH16Q9H6N6 1097 aa20.36■□□□□ 0.85
DKC1-213ENST00000620277 RAPGEF3O95398 923 aa20.35■□□□□ 0.85
DKC1-213ENST00000620277 HMOX1P09601 288 aa20.35■□□□□ 0.85
DKC1-213ENST00000620277 RIPK4P57078 832 aa20.35■□□□□ 0.85
DKC1-213ENST00000620277 C22orf23Q9BZE7 217 aa20.35■□□□□ 0.85
DKC1-213ENST00000620277 TMEM57Q8N5G2 664 aa20.34■□□□□ 0.85
DKC1-213ENST00000620277 TBC1D32Q96NH3 1257 aa20.34■□□□□ 0.85
DKC1-213ENST00000620277 ABCC2Q92887 1545 aa20.34■□□□□ 0.85
DKC1-213ENST00000620277 CHD1O14646 1710 aa20.33■□□□□ 0.84
DKC1-213ENST00000620277 APBB1O00213 710 aa20.32■□□□□ 0.84
DKC1-213ENST00000620277 SYNMO15061 1565 aa20.32■□□□□ 0.84
DKC1-213ENST00000620277 FANCAO15360 1455 aa20.31■□□□□ 0.84
DKC1-213ENST00000620277 POLR3AO14802 1390 aaPredicted RBP20.3■□□□□ 0.84
DKC1-213ENST00000620277 PTPRTO14522 1441 aa20.3■□□□□ 0.84
DKC1-213ENST00000620277 TMPOP42166 694 aaKnown RBP20.3■□□□□ 0.84
DKC1-213ENST00000620277 WDR63Q8IWG1 891 aa20.3■□□□□ 0.84
DKC1-213ENST00000620277 HSP90AA1P07900 732 aaKnown RBP20.29■□□□□ 0.84
DKC1-213ENST00000620277 PLXNC1O60486 1568 aa20.29■□□□□ 0.84
DKC1-213ENST00000620277 C14orf93Q9H972 538 aaKnown RBP20.28■□□□□ 0.84
DKC1-213ENST00000620277 RRAGDQ9NQL2 400 aaPredicted RBP20.28■□□□□ 0.84
DKC1-213ENST00000620277 ABCC1P33527 1531 aa20.28■□□□□ 0.84
DKC1-213ENST00000620277 ANTXR1Q9H6X2 564 aa20.28■□□□□ 0.84
DKC1-213ENST00000620277 ADGRL1O94910 1474 aa20.28■□□□□ 0.84
DKC1-213ENST00000620277 IQGAP1P46940 1657 aa20.28■□□□□ 0.84
DKC1-213ENST00000620277 TRPM2O94759 1503 aa20.27■□□□□ 0.84
DKC1-213ENST00000620277 EVC2Q86UK5 1308 aa20.27■□□□□ 0.84
DKC1-213ENST00000620277 ANKRD45Q5TZF3 282 aa20.27■□□□□ 0.84
DKC1-213ENST00000620277 NPC1L1Q9UHC9 1359 aa20.27■□□□□ 0.84
DKC1-213ENST00000620277 LAMC1P11047 1609 aa20.27■□□□□ 0.84
DKC1-213ENST00000620277 KDM5AP29375 1690 aaKnown RBP20.27■□□□□ 0.83
DKC1-213ENST00000620277 RNF17Q9BXT8 1623 aaKnown RBP20.26■□□□□ 0.83
DKC1-213ENST00000620277 MYOM1P52179 1685 aa20.26■□□□□ 0.83
DKC1-213ENST00000620277 RBM42Q9BTD8 480 aaKnown RBP20.25■□□□□ 0.83
DKC1-213ENST00000620277 TRIM35Q9UPQ4 493 aa20.25■□□□□ 0.83
DKC1-213ENST00000620277 SOX12O15370 315 aa20.25■□□□□ 0.83
DKC1-213ENST00000620277 ATF7IPQ6VMQ6 1270 aa20.25■□□□□ 0.83
DKC1-213ENST00000620277 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
DKC1-213ENST00000620277 STAC3Q96MF2 364 aa20.25■□□□□ 0.83
DKC1-213ENST00000620277 STAG3Q9UJ98 1225 aa20.25■□□□□ 0.83
DKC1-213ENST00000620277 NPM1P06748 294 aaKnown RBP eCLIP20.24■□□□□ 0.83
DKC1-213ENST00000620277 MCM4P33991 863 aa20.24■□□□□ 0.83
DKC1-213ENST00000620277 XRCC6P12956 609 aaKnown RBP eCLIP20.23■□□□□ 0.834e-11■■■□□ 18.1
DKC1-213ENST00000620277 HSCBQ8IWL3 235 aa20.23■□□□□ 0.83
DKC1-213ENST00000620277 CABP1Q9NZU7 370 aa20.23■□□□□ 0.83
DKC1-213ENST00000620277 ZCCHC11Q5TAX3 1644 aaKnown RBP20.23■□□□□ 0.83
DKC1-213ENST00000620277 GOLGA6L3A6NEY3 463 aa20.23■□□□□ 0.83
DKC1-213ENST00000620277 IDI1Q13907 227 aa20.22■□□□□ 0.83
DKC1-213ENST00000620277 TRAK2O60296 914 aa20.22■□□□□ 0.83
DKC1-213ENST00000620277 NUTM2FA1L443 756 aa20.21■□□□□ 0.83
DKC1-213ENST00000620277 PRKAR2BP31323 418 aa20.21■□□□□ 0.83
DKC1-213ENST00000620277 SPHKAPQ2M3C7 1700 aa20.21■□□□□ 0.83
DKC1-213ENST00000620277 ZFYVE16Q7Z3T8 1539 aa20.21■□□□□ 0.83
DKC1-213ENST00000620277 HSP90AB1P08238 724 aaKnown RBP20.21■□□□□ 0.83
DKC1-213ENST00000620277 DCTN1Q14203 1278 aa20.21■□□□□ 0.83
DKC1-213ENST00000620277 TSPYL6Q8N831 410 aa20.21■□□□□ 0.83
DKC1-213ENST00000620277 ABCA6Q8N139 1617 aa20.21■□□□□ 0.83
DKC1-213ENST00000620277 FYB1O15117 783 aa20.21■□□□□ 0.83
DKC1-213ENST00000620277 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
DKC1-213ENST00000620277 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
DKC1-213ENST00000620277 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
DKC1-213ENST00000620277 ATAD2Q6PL18 1390 aa20.2■□□□□ 0.82
DKC1-213ENST00000620277 ATP7AQ04656 1500 aa20.19■□□□□ 0.82
DKC1-213ENST00000620277 DIAPH1O60610 1272 aaKnown RBP20.19■□□□□ 0.82
DKC1-213ENST00000620277 NAP1L5Q96NT1 182 aaPredicted RBP20.19■□□□□ 0.82
DKC1-213ENST00000620277 WAPLQ7Z5K2 1190 aa20.19■□□□□ 0.82
DKC1-213ENST00000620277 MLECQ14165 292 aa20.18■□□□□ 0.82
DKC1-213ENST00000620277 FBXO31Q5XUX0 539 aaPredicted RBP20.18■□□□□ 0.82
DKC1-213ENST00000620277 NGEFQ8N5V2 710 aa20.18■□□□□ 0.82
DKC1-213ENST00000620277 PHACTR3Q96KR7 559 aa20.18■□□□□ 0.82
DKC1-213ENST00000620277 CEP152O94986 1710 aa20.18■□□□□ 0.82
DKC1-213ENST00000620277 FAM83GA6ND36 823 aa20.17■□□□□ 0.82
DKC1-213ENST00000620277 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
DKC1-213ENST00000620277 VGFO15240 615 aaPredicted RBP20.17■□□□□ 0.82
DKC1-213ENST00000620277 A0A1W2PP64 1363 aa20.17■□□□□ 0.82
DKC1-213ENST00000620277 NCKAP5LQ9HCH0 1330 aa20.16■□□□□ 0.82
DKC1-213ENST00000620277 CD2BP2O95400 341 aaKnown RBP20.16■□□□□ 0.82
DKC1-213ENST00000620277 CHMP5Q9NZZ3 219 aa20.16■□□□□ 0.82
DKC1-213ENST00000620277 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
DKC1-213ENST00000620277 TPRNQ4KMQ1 711 aa20.15■□□□□ 0.82
DKC1-213ENST00000620277 PLEKHF1Q96S99 279 aa20.14■□□□□ 0.82
DKC1-213ENST00000620277 EMILIN1Q9Y6C2 1016 aa20.14■□□□□ 0.82
DKC1-213ENST00000620277 FAM43AQ8N2R8 423 aa20.14■□□□□ 0.81
DKC1-213ENST00000620277 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
DKC1-213ENST00000620277 NPATQ14207 1427 aa20.14■□□□□ 0.81
DKC1-213ENST00000620277 MAP3K4Q9Y6R4 1608 aa20.13■□□□□ 0.81
DKC1-213ENST00000620277 RTEL1-TNFRSF6BF6WH68 1400 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms