RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 SAFB2Q14151 953 aaKnown RBP eCLIP20.69■□□□□ 0.9
PSMC3-213ENST00000619920 SLC12A5Q9H2X9 1139 aa20.69■□□□□ 0.9
PSMC3-213ENST00000619920 TECPR2O15040 1411 aa20.69■□□□□ 0.9
PSMC3-213ENST00000619920 TXNDC2Q86VQ3 553 aa20.68■□□□□ 0.9
PSMC3-213ENST00000619920 ATAD2Q6PL18 1390 aa20.68■□□□□ 0.9
PSMC3-213ENST00000619920 LTKP29376 864 aa20.68■□□□□ 0.9
PSMC3-213ENST00000619920 ZBED9Q6R2W3 1325 aa20.67■□□□□ 0.9
PSMC3-213ENST00000619920 ADAMTSL3P82987 1691 aa20.67■□□□□ 0.9
PSMC3-213ENST00000619920 FAM135BQ49AJ0 1406 aa20.67■□□□□ 0.9
PSMC3-213ENST00000619920 BCANQ96GW7 911 aa20.67■□□□□ 0.9
PSMC3-213ENST00000619920 MINK1Q8N4C8 1332 aaPredicted RBP20.67■□□□□ 0.9
PSMC3-213ENST00000619920 ADAMTS13Q76LX8 1427 aa20.66■□□□□ 0.9
PSMC3-213ENST00000619920 RIMS1Q86UR5 1692 aaKnown RBP20.66■□□□□ 0.9
PSMC3-213ENST00000619920 KNDC1Q76NI1 1749 aa20.66■□□□□ 0.9
PSMC3-213ENST00000619920 CABP2Q9NPB3 220 aa20.66■□□□□ 0.9
PSMC3-213ENST00000619920 PPP2R1AP30153 589 aa20.65■□□□□ 0.9
PSMC3-213ENST00000619920 SRPK2P78362 688 aaKnown RBP20.65■□□□□ 0.9
PSMC3-213ENST00000619920 INSRP06213 1382 aa20.65■□□□□ 0.9
PSMC3-213ENST00000619920 ANKRD36BQ8N2N9 1353 aa20.65■□□□□ 0.9
PSMC3-213ENST00000619920 MED14O60244 1454 aa20.64■□□□□ 0.9
PSMC3-213ENST00000619920 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.9
PSMC3-213ENST00000619920 USP32Q8NFA0 1604 aa20.64■□□□□ 0.89
PSMC3-213ENST00000619920 NSD3Q9BZ95 1437 aa20.63■□□□□ 0.89
PSMC3-213ENST00000619920 CDK19Q9BWU1 502 aa20.63■□□□□ 0.89
PSMC3-213ENST00000619920 CPS1P31327 1500 aa20.62■□□□□ 0.89
PSMC3-213ENST00000619920 WAPLQ7Z5K2 1190 aa20.62■□□□□ 0.89
PSMC3-213ENST00000619920 CEP170BQ9Y4F5 1589 aaPredicted RBP20.61■□□□□ 0.89
PSMC3-213ENST00000619920 PLEKHH1Q9ULM0 1364 aa20.61■□□□□ 0.89
PSMC3-213ENST00000619920 TBX22Q9Y458 520 aa20.6■□□□□ 0.89
PSMC3-213ENST00000619920 CGNL1Q0VF96 1302 aa20.6■□□□□ 0.89
PSMC3-213ENST00000619920 TERF2IPQ9NYB0 399 aa20.59■□□□□ 0.89
PSMC3-213ENST00000619920 NSD2O96028 1365 aa20.58■□□□□ 0.89
PSMC3-213ENST00000619920 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
PSMC3-213ENST00000619920 WASLO00401 505 aaPredicted RBP20.55■□□□□ 0.88
PSMC3-213ENST00000619920 A0A1W2PP64 1363 aa20.55■□□□□ 0.88
PSMC3-213ENST00000619920 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
PSMC3-213ENST00000619920 SETD1BQ9UPS6 1966 aaKnown RBP20.54■□□□□ 0.88
PSMC3-213ENST00000619920 MORC1Q86VD1 984 aa20.54■□□□□ 0.88
PSMC3-213ENST00000619920 ROBO2Q9HCK4 1378 aa20.53■□□□□ 0.88
PSMC3-213ENST00000619920 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
PSMC3-213ENST00000619920 SLC26A8Q96RN1 970 aa20.53■□□□□ 0.88
PSMC3-213ENST00000619920 CD163L1Q9NR16 1453 aa20.52■□□□□ 0.88
PSMC3-213ENST00000619920 BLMP54132 1417 aaPredicted RBP20.51■□□□□ 0.87
PSMC3-213ENST00000619920 PTPRUQ92729 1446 aa20.51■□□□□ 0.87
PSMC3-213ENST00000619920 ATP7BP35670 1465 aa20.51■□□□□ 0.87
PSMC3-213ENST00000619920 CABP1Q9NZU7 370 aa20.51■□□□□ 0.87
PSMC3-213ENST00000619920 PIK3R4Q99570 1358 aa20.5■□□□□ 0.87
PSMC3-213ENST00000619920 ADGRB2O60241 1585 aa20.49■□□□□ 0.87
PSMC3-213ENST00000619920 WDR43Q15061 677 aaKnown RBP eCLIP20.49■□□□□ 0.87
PSMC3-213ENST00000619920 ANKLE2Q86XL3 938 aa20.49■□□□□ 0.87
PSMC3-213ENST00000619920 POLR3AO14802 1390 aaPredicted RBP20.49■□□□□ 0.87
PSMC3-213ENST00000619920 PTCH1Q13635 1447 aa20.48■□□□□ 0.87
PSMC3-213ENST00000619920 AMOTL2Q9Y2J4 779 aa20.48■□□□□ 0.87
PSMC3-213ENST00000619920 ADAMTS8Q9UP79 889 aa20.46■□□□□ 0.87
PSMC3-213ENST00000619920 NUDT16Q96DE0 195 aaKnown RBP20.46■□□□□ 0.87
PSMC3-213ENST00000619920 CCDC61Q9Y6R9 512 aa20.46■□□□□ 0.87
PSMC3-213ENST00000619920 SMG6Q86US8 1419 aaKnown RBP20.45■□□□□ 0.86
PSMC3-213ENST00000619920 CPSF1Q10570 1443 aaKnown RBP20.44■□□□□ 0.86
PSMC3-213ENST00000619920 PPIP5K1Q6PFW1 1433 aa20.44■□□□□ 0.86
PSMC3-213ENST00000619920 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.43■□□□□ 0.86
PSMC3-213ENST00000619920 XRN1Q8IZH2 1706 aaKnown RBP20.43■□□□□ 0.86
PSMC3-213ENST00000619920 FYB1O15117 783 aa20.42■□□□□ 0.86
PSMC3-213ENST00000619920 NEFLP07196 543 aa20.42■□□□□ 0.86
PSMC3-213ENST00000619920 PDE3BQ13370 1112 aa20.42■□□□□ 0.86
PSMC3-213ENST00000619920 ANKRD26Q9UPS8 1709 aa20.4■□□□□ 0.86
PSMC3-213ENST00000619920 NUDCQ9Y266 331 aa20.4■□□□□ 0.86
PSMC3-213ENST00000619920 CDC42BPGQ6DT37 1551 aa20.39■□□□□ 0.86
PSMC3-213ENST00000619920 CFAP53Q96M91 514 aa20.39■□□□□ 0.85
PSMC3-213ENST00000619920 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.85
PSMC3-213ENST00000619920 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.85
PSMC3-213ENST00000619920 EDC4Q6P2E9 1401 aaKnown RBP20.39■□□□□ 0.85
PSMC3-213ENST00000619920 PRR36Q9H6K5 1346 aa20.39■□□□□ 0.85
PSMC3-213ENST00000619920 TNNT2P45379 298 aaPredicted RBP20.38■□□□□ 0.85
PSMC3-213ENST00000619920 MTHFSP49914 203 aa20.38■□□□□ 0.85
PSMC3-213ENST00000619920 GGNBP2Q9H3C7 697 aa20.38■□□□□ 0.85
PSMC3-213ENST00000619920 KIF20BQ96Q89 1820 aa20.36■□□□□ 0.85
PSMC3-213ENST00000619920 PLEKHG3A1L390 1219 aa20.36■□□□□ 0.85
PSMC3-213ENST00000619920 KCNA6P17658 529 aa20.34■□□□□ 0.85
PSMC3-213ENST00000619920 FKBP8Q14318 412 aa20.34■□□□□ 0.85
PSMC3-213ENST00000619920 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
PSMC3-213ENST00000619920 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
PSMC3-213ENST00000619920 NPHP4O75161 1426 aaPredicted RBP20.34■□□□□ 0.85
PSMC3-213ENST00000619920 MON2Q7Z3U7 1717 aa20.33■□□□□ 0.85
PSMC3-213ENST00000619920 AKAP12Q02952 1782 aa20.33■□□□□ 0.84
PSMC3-213ENST00000619920 CHD2O14647 1828 aaKnown RBP20.33■□□□□ 0.84
PSMC3-213ENST00000619920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.32■□□□□ 0.84
PSMC3-213ENST00000619920 NCKAP5LQ9HCH0 1330 aa20.32■□□□□ 0.84
PSMC3-213ENST00000619920 ITSN1Q15811 1721 aa20.31■□□□□ 0.84
PSMC3-213ENST00000619920 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
PSMC3-213ENST00000619920 SHPRHQ149N8 1683 aa20.31■□□□□ 0.84
PSMC3-213ENST00000619920 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
PSMC3-213ENST00000619920 ANKARQ7Z5J8 1434 aa20.29■□□□□ 0.84
PSMC3-213ENST00000619920 ACEP12821 1306 aa20.28■□□□□ 0.84
PSMC3-213ENST00000619920 ERICH6BQ5W0A0 696 aa20.27■□□□□ 0.84
PSMC3-213ENST00000619920 PNPLA6Q8IY17 1366 aa20.27■□□□□ 0.84
PSMC3-213ENST00000619920 CCDC146Q8IYE0 955 aa20.26■□□□□ 0.83
PSMC3-213ENST00000619920 ZNF521Q96K83 1311 aa20.26■□□□□ 0.83
PSMC3-213ENST00000619920 NME9Q86XW9 330 aa20.25■□□□□ 0.83
PSMC3-213ENST00000619920 AATKQ6ZMQ8 1374 aa20.25■□□□□ 0.83
PSMC3-213ENST00000619920 COL3A1P02461 1466 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms