RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 SCAPERQ9BY12 1400 aa11.03□□□□□ -0.64
C9orf72-206ENST00000619707 RARSP54136 660 aaKnown RBP11.03□□□□□ -0.64
C9orf72-206ENST00000619707 PANK2Q9BZ23 570 aa11.03□□□□□ -0.64
C9orf72-206ENST00000619707 CHMP5Q9NZZ3 219 aa11.03□□□□□ -0.64
C9orf72-206ENST00000619707 SAMD1Q6SPF0 538 aaPredicted RBP11.02□□□□□ -0.64
C9orf72-206ENST00000619707 TRAK2O60296 914 aa11.02□□□□□ -0.65
C9orf72-206ENST00000619707 NEUROD2Q15784 382 aa11.02□□□□□ -0.65
C9orf72-206ENST00000619707 STAC3Q96MF2 364 aa11.02□□□□□ -0.65
C9orf72-206ENST00000619707 MRE11P49959 708 aa11.02□□□□□ -0.65
C9orf72-206ENST00000619707 RLBP1P12271 317 aa11.01□□□□□ -0.65
C9orf72-206ENST00000619707 SPHKAPQ2M3C7 1700 aa11.01□□□□□ -0.65
C9orf72-206ENST00000619707 HSP90AA1P07900 732 aaKnown RBP11.01□□□□□ -0.65
C9orf72-206ENST00000619707 C22orf23Q9BZE7 217 aa11.01□□□□□ -0.65
C9orf72-206ENST00000619707 POLR3AO14802 1390 aaPredicted RBP11□□□□□ -0.65
C9orf72-206ENST00000619707 ERCC6Q03468 1493 aa11□□□□□ -0.65
C9orf72-206ENST00000619707 TTC37Q6PGP7 1564 aa11□□□□□ -0.65
C9orf72-206ENST00000619707 BCL2L13Q9BXK5 485 aa11□□□□□ -0.65
C9orf72-206ENST00000619707 DDX11L8A8MPP1 907 aa10.99□□□□□ -0.65
C9orf72-206ENST00000619707 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
C9orf72-206ENST00000619707 TNNQ9UQP3 1299 aa10.99□□□□□ -0.65
C9orf72-206ENST00000619707 RRP7AQ9Y3A4 280 aaKnown RBP10.99□□□□□ -0.65
C9orf72-206ENST00000619707 RUNDC1Q96C34 613 aa10.99□□□□□ -0.65
C9orf72-206ENST00000619707 HSP90AA2PQ14568 343 aaPredicted RBP10.99□□□□□ -0.65
C9orf72-206ENST00000619707 HSCBQ8IWL3 235 aa10.99□□□□□ -0.65
C9orf72-206ENST00000619707 CARD14Q9BXL6 1004 aa10.99□□□□□ -0.65
C9orf72-206ENST00000619707 MYH16Q9H6N6 1097 aa10.99□□□□□ -0.65
C9orf72-206ENST00000619707 CEP152O94986 1710 aa10.99□□□□□ -0.65
C9orf72-206ENST00000619707 GRPEL1Q9HAV7 217 aa10.98□□□□□ -0.65
C9orf72-206ENST00000619707 WDR63Q8IWG1 891 aa10.97□□□□□ -0.65
C9orf72-206ENST00000619707 TCP11L2Q8N4U5 519 aa10.97□□□□□ -0.65
C9orf72-206ENST00000619707 ISY1Q9ULR0 285 aaKnown RBP10.97□□□□□ -0.65
C9orf72-206ENST00000619707 TRPM2O94759 1503 aa10.97□□□□□ -0.65
C9orf72-206ENST00000619707 RRP9O43818 475 aaKnown RBP10.97□□□□□ -0.65
C9orf72-206ENST00000619707 MVPQ14764 893 aaKnown RBP10.97□□□□□ -0.65
C9orf72-206ENST00000619707 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
C9orf72-206ENST00000619707 ERVK-7P63135 1459 aa10.96□□□□□ -0.65
C9orf72-206ENST00000619707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.96□□□□□ -0.65
C9orf72-206ENST00000619707 MORC1Q86VD1 984 aa10.96□□□□□ -0.66
C9orf72-206ENST00000619707 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.66
C9orf72-206ENST00000619707 ESPNB1AK53 854 aa10.95□□□□□ -0.66
C9orf72-206ENST00000619707 TNNT2P45379 298 aaPredicted RBP10.95□□□□□ -0.66
C9orf72-206ENST00000619707 RBM10P98175 930 aaKnown RBP10.95□□□□□ -0.66
C9orf72-206ENST00000619707 TRIM44Q96DX7 344 aaPredicted RBP10.95□□□□□ -0.66
C9orf72-206ENST00000619707 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
C9orf72-206ENST00000619707 ZKSCAN2Q63HK3 967 aa10.95□□□□□ -0.66
C9orf72-206ENST00000619707 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
C9orf72-206ENST00000619707 KIAA1210Q9ULL0 1709 aa10.94□□□□□ -0.66
C9orf72-206ENST00000619707 CLTCL1P53675 1640 aa10.94□□□□□ -0.66
C9orf72-206ENST00000619707 DZIP1LQ8IYY4 767 aaKnown RBP10.94□□□□□ -0.66
C9orf72-206ENST00000619707 PHF23Q9BUL5 403 aaPredicted RBP10.94□□□□□ -0.66
C9orf72-206ENST00000619707 IQSEC2Q5JU85 1478 aa10.94□□□□□ -0.66
C9orf72-206ENST00000619707 SHPRHQ149N8 1683 aa10.94□□□□□ -0.66
C9orf72-206ENST00000619707 CFAP70Q5T0N1 1121 aa10.93□□□□□ -0.66
C9orf72-206ENST00000619707 CCDC27Q2M243 656 aa10.93□□□□□ -0.66
C9orf72-206ENST00000619707 PTPRTO14522 1441 aa10.93□□□□□ -0.66
C9orf72-206ENST00000619707 CFAP53Q96M91 514 aa10.92□□□□□ -0.66
C9orf72-206ENST00000619707 NSD3Q9BZ95 1437 aa10.92□□□□□ -0.66
C9orf72-206ENST00000619707 GBP4Q96PP9 640 aa10.92□□□□□ -0.66
C9orf72-206ENST00000619707 ZNF692Q9BU19 519 aaPredicted RBP10.92□□□□□ -0.66
C9orf72-206ENST00000619707 KANK1Q14678 1352 aa10.92□□□□□ -0.66
C9orf72-206ENST00000619707 HDAC1Q13547 482 aaPredicted RBP10.91□□□□□ -0.66
C9orf72-206ENST00000619707 HSP90AB1P08238 724 aaKnown RBP10.91□□□□□ -0.66
C9orf72-206ENST00000619707 NCOA3Q9Y6Q9 1424 aa10.91□□□□□ -0.66
C9orf72-206ENST00000619707 EFCAB2Q5VUJ9 269 aa10.91□□□□□ -0.66
C9orf72-206ENST00000619707 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
C9orf72-206ENST00000619707 SMC4Q9NTJ3 1288 aa10.91□□□□□ -0.66
C9orf72-206ENST00000619707 ERBB4Q15303 1308 aa10.9□□□□□ -0.66
C9orf72-206ENST00000619707 PTMSP20962 102 aa10.9□□□□□ -0.66
C9orf72-206ENST00000619707 SKOR2Q2VWA4 1001 aaPredicted RBP10.9□□□□□ -0.66
C9orf72-206ENST00000619707 TNPO1Q92973 898 aaKnown RBP10.9□□□□□ -0.66
C9orf72-206ENST00000619707 ZMYND15Q9H091 742 aa10.9□□□□□ -0.66
C9orf72-206ENST00000619707 CIZ1Q9ULV3 898 aaPredicted RBP10.9□□□□□ -0.66
C9orf72-206ENST00000619707 DDX19BQ9UMR2 479 aa10.9□□□□□ -0.66
C9orf72-206ENST00000619707 SNX21Q969T3 373 aa10.9□□□□□ -0.66
C9orf72-206ENST00000619707 SHROOM2Q13796 1616 aa10.89□□□□□ -0.67
C9orf72-206ENST00000619707 CT47B1P0C2W7 299 aaPredicted RBP10.89□□□□□ -0.67
C9orf72-206ENST00000619707 MTHFSP49914 203 aa10.89□□□□□ -0.67
C9orf72-206ENST00000619707 ABCA6Q8N139 1617 aa10.89□□□□□ -0.67
C9orf72-206ENST00000619707 DDIT3P35638 169 aa10.89□□□□□ -0.67
C9orf72-206ENST00000619707 SPAG9O60271 1321 aaKnown RBP10.89□□□□□ -0.67
C9orf72-206ENST00000619707 MAP3K4Q9Y6R4 1608 aa10.89□□□□□ -0.67
C9orf72-206ENST00000619707 RBM25P49756 843 aaKnown RBP10.89□□□□□ -0.67
C9orf72-206ENST00000619707 SMC5Q8IY18 1101 aa10.89□□□□□ -0.67
C9orf72-206ENST00000619707 ADGRF5Q8IZF2 1346 aa10.89□□□□□ -0.67
C9orf72-206ENST00000619707 SBNO2Q9Y2G9 1366 aa10.88□□□□□ -0.67
C9orf72-206ENST00000619707 MYOM2P54296 1465 aa10.88□□□□□ -0.67
C9orf72-206ENST00000619707 PLCH2O75038 1416 aa10.88□□□□□ -0.67
C9orf72-206ENST00000619707 TRAPPC8Q9Y2L5 1435 aa10.88□□□□□ -0.67
C9orf72-206ENST00000619707 TPM2P07951 284 aa10.88□□□□□ -0.67
C9orf72-206ENST00000619707 U2AF1L5P0DN76 240 aaPredicted RBP10.88□□□□□ -0.67
C9orf72-206ENST00000619707 TRIM27P14373 513 aa10.88□□□□□ -0.67
C9orf72-206ENST00000619707 U2AF1Q01081 240 aaKnown RBP eCLIP10.88□□□□□ -0.67
C9orf72-206ENST00000619707 ZNF518AQ6AHZ1 1483 aa10.88□□□□□ -0.67
C9orf72-206ENST00000619707 TET3O43151 1660 aa10.88□□□□□ -0.67
C9orf72-206ENST00000619707 GAS2L3Q86XJ1 694 aa10.87□□□□□ -0.67
C9orf72-206ENST00000619707 CFAP44Q96MT7 982 aa10.87□□□□□ -0.67
C9orf72-206ENST00000619707 ABCC1P33527 1531 aa10.87□□□□□ -0.67
C9orf72-206ENST00000619707 TSR2Q969E8 191 aaKnown RBP10.87□□□□□ -0.67
C9orf72-206ENST00000619707 RAB3GAP1Q15042 981 aa10.87□□□□□ -0.67
C9orf72-206ENST00000619707 ATF7IPQ6VMQ6 1270 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms