RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 TNNT2P45379 298 aaPredicted RBP21.84■■□□□ 1.09
LHX3-203ENST00000619587 SCAPERQ9BY12 1400 aa21.83■■□□□ 1.09
LHX3-203ENST00000619587 TCP11L2Q8N4U5 519 aa21.83■■□□□ 1.09
LHX3-203ENST00000619587 SPHKAPQ2M3C7 1700 aa21.83■■□□□ 1.08
LHX3-203ENST00000619587 AAMPQ13685 434 aa21.83■■□□□ 1.08
LHX3-203ENST00000619587 GAS2L3Q86XJ1 694 aa21.81■■□□□ 1.08
LHX3-203ENST00000619587 POLR3AO14802 1390 aaPredicted RBP21.81■■□□□ 1.08
LHX3-203ENST00000619587 DDX11L8A8MPP1 907 aa21.81■■□□□ 1.08
LHX3-203ENST00000619587 TTC37Q6PGP7 1564 aa21.8■■□□□ 1.08
LHX3-203ENST00000619587 HSCBQ8IWL3 235 aa21.8■■□□□ 1.08
LHX3-203ENST00000619587 SHPRHQ149N8 1683 aa21.8■■□□□ 1.08
LHX3-203ENST00000619587 MVPQ14764 893 aaKnown RBP21.8■■□□□ 1.08
LHX3-203ENST00000619587 ERVK-7P63135 1459 aa21.8■■□□□ 1.08
LHX3-203ENST00000619587 DUOX2Q9NRD8 1548 aa21.79■■□□□ 1.08
LHX3-203ENST00000619587 RUNDC1Q96C34 613 aa21.79■■□□□ 1.08
LHX3-203ENST00000619587 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
LHX3-203ENST00000619587 IQSEC2Q5JU85 1478 aa21.77■■□□□ 1.07
LHX3-203ENST00000619587 DDIT3P35638 169 aa21.76■■□□□ 1.07
LHX3-203ENST00000619587 TNPO1Q92973 898 aaKnown RBP21.76■■□□□ 1.07
LHX3-203ENST00000619587 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
LHX3-203ENST00000619587 TRIM44Q96DX7 344 aaPredicted RBP21.75■■□□□ 1.07
LHX3-203ENST00000619587 NCOA3Q9Y6Q9 1424 aa21.75■■□□□ 1.07
LHX3-203ENST00000619587 FTSJ3Q8IY81 847 aaKnown RBP21.74■■□□□ 1.07
LHX3-203ENST00000619587 WDR63Q8IWG1 891 aa21.74■■□□□ 1.07
LHX3-203ENST00000619587 CLTCL1P53675 1640 aa21.74■■□□□ 1.07
LHX3-203ENST00000619587 MORC1Q86VD1 984 aa21.73■■□□□ 1.07
LHX3-203ENST00000619587 DZIP1LQ8IYY4 767 aaKnown RBP21.73■■□□□ 1.07
LHX3-203ENST00000619587 ZKSCAN2Q63HK3 967 aa21.72■■□□□ 1.07
LHX3-203ENST00000619587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.72■■□□□ 1.07
LHX3-203ENST00000619587 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
LHX3-203ENST00000619587 ISY1Q9ULR0 285 aaKnown RBP21.71■■□□□ 1.07
LHX3-203ENST00000619587 TRPM2O94759 1503 aa21.71■■□□□ 1.07
LHX3-203ENST00000619587 TSR2Q969E8 191 aaKnown RBP21.7■■□□□ 1.06
LHX3-203ENST00000619587 NSD3Q9BZ95 1437 aa21.69■■□□□ 1.06
LHX3-203ENST00000619587 TPM2P07951 284 aa21.69■■□□□ 1.06
LHX3-203ENST00000619587 FOXD4L1Q9NU39 408 aa21.69■■□□□ 1.06
LHX3-203ENST00000619587 ITPRIPQ8IWB1 547 aa21.67■■□□□ 1.06
LHX3-203ENST00000619587 HSP90AB1P08238 724 aaKnown RBP21.67■■□□□ 1.06
LHX3-203ENST00000619587 TRIM27P14373 513 aa21.67■■□□□ 1.06
LHX3-203ENST00000619587 HDAC1Q13547 482 aaPredicted RBP21.67■■□□□ 1.06
LHX3-203ENST00000619587 SMC5Q8IY18 1101 aa21.66■■□□□ 1.06
LHX3-203ENST00000619587 RBM25P49756 843 aaKnown RBP21.66■■□□□ 1.06
LHX3-203ENST00000619587 MTHFSP49914 203 aa21.66■■□□□ 1.06
LHX3-203ENST00000619587 PDCL3Q9H2J4 239 aa21.66■■□□□ 1.06
LHX3-203ENST00000619587 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
LHX3-203ENST00000619587 RAB3GAP1Q15042 981 aa21.65■■□□□ 1.06
LHX3-203ENST00000619587 ADGRF5Q8IZF2 1346 aa21.65■■□□□ 1.06
LHX3-203ENST00000619587 SNX21Q969T3 373 aa21.65■■□□□ 1.06
LHX3-203ENST00000619587 GBP4Q96PP9 640 aa21.65■■□□□ 1.06
LHX3-203ENST00000619587 CD2BP2O95400 341 aaKnown RBP21.64■■□□□ 1.06
LHX3-203ENST00000619587 SLC12A5Q9H2X9 1139 aa21.64■■□□□ 1.06
LHX3-203ENST00000619587 KANK1Q14678 1352 aa21.64■■□□□ 1.06
LHX3-203ENST00000619587 CCDC27Q2M243 656 aa21.64■■□□□ 1.05
LHX3-203ENST00000619587 STAC3Q96MF2 364 aa21.64■■□□□ 1.05
LHX3-203ENST00000619587 PTPRTO14522 1441 aa21.64■■□□□ 1.05
LHX3-203ENST00000619587 KIAA1210Q9ULL0 1709 aa21.64■■□□□ 1.05
LHX3-203ENST00000619587 KIAA1211Q6ZU35 1233 aa21.63■■□□□ 1.05
LHX3-203ENST00000619587 ABCA6Q8N139 1617 aa21.63■■□□□ 1.05
LHX3-203ENST00000619587 SHROOM2Q13796 1616 aa21.63■■□□□ 1.05
LHX3-203ENST00000619587 LNPKQ9C0E8 428 aa21.63■■□□□ 1.05
LHX3-203ENST00000619587 EXOSC9Q06265 439 aaKnown RBP21.62■■□□□ 1.05
LHX3-203ENST00000619587 SSH1Q8WYL5 1049 aa21.62■■□□□ 1.05
LHX3-203ENST00000619587 CIZ1Q9ULV3 898 aaPredicted RBP21.62■■□□□ 1.05
LHX3-203ENST00000619587 KIF2CQ99661 725 aa21.61■■□□□ 1.05
LHX3-203ENST00000619587 DDX19BQ9UMR2 479 aa21.61■■□□□ 1.05
LHX3-203ENST00000619587 ZNF518AQ6AHZ1 1483 aa21.6■■□□□ 1.05
LHX3-203ENST00000619587 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
LHX3-203ENST00000619587 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
LHX3-203ENST00000619587 TRAPPC8Q9Y2L5 1435 aa21.6■■□□□ 1.05
LHX3-203ENST00000619587 SKOR2Q2VWA4 1001 aaPredicted RBP21.6■■□□□ 1.05
LHX3-203ENST00000619587 SSFA2P28290 1259 aa21.59■■□□□ 1.05
LHX3-203ENST00000619587 TMEM57Q8N5G2 664 aa21.59■■□□□ 1.05
LHX3-203ENST00000619587 UGGT1Q9NYU2 1555 aa21.59■■□□□ 1.05
LHX3-203ENST00000619587 AK9Q5TCS8 1911 aa21.59■■□□□ 1.05
LHX3-203ENST00000619587 RBM42Q9BTD8 480 aaKnown RBP21.59■■□□□ 1.05
LHX3-203ENST00000619587 ATF7IPQ6VMQ6 1270 aa21.58■■□□□ 1.05
LHX3-203ENST00000619587 NOB1Q9ULX3 412 aaKnown RBP21.58■■□□□ 1.05
LHX3-203ENST00000619587 MAP3K4Q9Y6R4 1608 aa21.58■■□□□ 1.04
LHX3-203ENST00000619587 NASPP49321 788 aaPredicted RBP21.58■■□□□ 1.04
LHX3-203ENST00000619587 CCDC173Q0VFZ6 552 aa21.57■■□□□ 1.04
LHX3-203ENST00000619587 SLC24A1O60721 1099 aa21.57■■□□□ 1.04
LHX3-203ENST00000619587 NUCB1Q02818 461 aa21.56■■□□□ 1.04
LHX3-203ENST00000619587 CFAP53Q96M91 514 aa21.56■■□□□ 1.04
LHX3-203ENST00000619587 PPP1R9BQ96SB3 815 aa21.56■■□□□ 1.04
LHX3-203ENST00000619587 ZBTB40Q9NUA8 1239 aa21.56■■□□□ 1.04
LHX3-203ENST00000619587 ZSCAN30Q86W11 494 aa21.55■■□□□ 1.04
LHX3-203ENST00000619587 GAS2L2Q8NHY3 880 aa21.54■■□□□ 1.04
LHX3-203ENST00000619587 RBM10P98175 930 aaKnown RBP21.53■■□□□ 1.04
LHX3-203ENST00000619587 PODXL2Q9NZ53 605 aa21.53■■□□□ 1.04
LHX3-203ENST00000619587 TRAK1Q9UPV9 953 aa21.53■■□□□ 1.04
LHX3-203ENST00000619587 CALD1Q05682 793 aaKnown RBP21.53■■□□□ 1.04
LHX3-203ENST00000619587 K7ELQ4 463 aaPredicted RBP21.52■■□□□ 1.04
LHX3-203ENST00000619587 CHD1LQ86WJ1 897 aa21.52■■□□□ 1.04
LHX3-203ENST00000619587 AFAP1Q8N556 730 aa21.52■■□□□ 1.04
LHX3-203ENST00000619587 OFD1O75665 1012 aa21.52■■□□□ 1.04
LHX3-203ENST00000619587 RIPK4P57078 832 aa21.52■■□□□ 1.04
LHX3-203ENST00000619587 DDX49Q9Y6V7 483 aaKnown RBP21.52■■□□□ 1.04
LHX3-203ENST00000619587 ADGRB2O60241 1585 aa21.51■■□□□ 1.03
LHX3-203ENST00000619587 SPAG9O60271 1321 aaKnown RBP21.51■■□□□ 1.03
LHX3-203ENST00000619587 CT47B1P0C2W7 299 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms