RNA–Protein interactions for RNA: ENST00000619158.1

CDH11-219, Transcript of cadherin 11, humanhuman

Gene CDH11, Length 3,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-219ENST00000619158 PHRF1Q9P1Y6 1649 aaKnown RBP7.93□□□□□ -1.14
CDH11-219ENST00000619158 STAC3Q96MF2 364 aa7.92□□□□□ -1.14
CDH11-219ENST00000619158 ATF5Q9Y2D1 282 aaPredicted RBP7.92□□□□□ -1.14
CDH11-219ENST00000619158 TPRNQ4KMQ1 711 aa7.92□□□□□ -1.14
CDH11-219ENST00000619158 GTF3C3Q9Y5Q9 886 aa7.92□□□□□ -1.14
CDH11-219ENST00000619158 WNK3Q9BYP7 1800 aa7.92□□□□□ -1.14
CDH11-219ENST00000619158 PHLPP1O60346 1717 aa7.92□□□□□ -1.14
CDH11-219ENST00000619158 ANKRD26Q9UPS8 1709 aa7.92□□□□□ -1.14
CDH11-219ENST00000619158 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
CDH11-219ENST00000619158 PODXL2Q9NZ53 605 aa7.91□□□□□ -1.14
CDH11-219ENST00000619158 TBX22Q9Y458 520 aa7.91□□□□□ -1.14
CDH11-219ENST00000619158 CLSPNQ9HAW4 1339 aa7.91□□□□□ -1.14
CDH11-219ENST00000619158 ADGRL3Q9HAR2 1447 aa7.91□□□□□ -1.14
CDH11-219ENST00000619158 PPARGC1BQ86YN6 1023 aaKnown RBP7.9□□□□□ -1.14
CDH11-219ENST00000619158 NCKAP5LQ9HCH0 1330 aa7.9□□□□□ -1.14
CDH11-219ENST00000619158 LRPPRCP42704 1394 aaKnown RBP7.9□□□□□ -1.14
CDH11-219ENST00000619158 PLCB2Q00722 1185 aa7.9□□□□□ -1.14
CDH11-219ENST00000619158 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.9□□□□□ -1.14
CDH11-219ENST00000619158 METP08581 1390 aa7.9□□□□□ -1.15
CDH11-219ENST00000619158 ABCC11Q96J66 1382 aa7.9□□□□□ -1.15
CDH11-219ENST00000619158 NRAPQ86VF7 1730 aa7.89□□□□□ -1.15
CDH11-219ENST00000619158 TULP4Q9NRJ4 1543 aa7.89□□□□□ -1.15
CDH11-219ENST00000619158 HSPA2P54652 639 aa7.88□□□□□ -1.15
CDH11-219ENST00000619158 TRIM26Q12899 539 aaPredicted RBP7.88□□□□□ -1.15
CDH11-219ENST00000619158 ANKLE2Q86XL3 938 aa7.88□□□□□ -1.15
CDH11-219ENST00000619158 ESF1Q9H501 851 aaKnown RBP7.87□□□□□ -1.15
CDH11-219ENST00000619158 YTHDC2Q9H6S0 1430 aaKnown RBP7.87□□□□□ -1.15
CDH11-219ENST00000619158 SBNO2Q9Y2G9 1366 aa7.87□□□□□ -1.15
CDH11-219ENST00000619158 PXDNQ92626 1479 aa7.87□□□□□ -1.15
CDH11-219ENST00000619158 NWD2Q9ULI1 1742 aa7.86□□□□□ -1.15
CDH11-219ENST00000619158 ANKARQ7Z5J8 1434 aa7.86□□□□□ -1.15
CDH11-219ENST00000619158 KCNA6P17658 529 aa7.86□□□□□ -1.15
CDH11-219ENST00000619158 MYT1LQ9UL68 1186 aa7.85□□□□□ -1.15
CDH11-219ENST00000619158 PLCH1Q4KWH8 1693 aa7.85□□□□□ -1.15
CDH11-219ENST00000619158 CAMTA1Q9Y6Y1 1673 aa7.85□□□□□ -1.15
CDH11-219ENST00000619158 ABCC6O95255 1503 aa7.85□□□□□ -1.15
CDH11-219ENST00000619158 ROBO2Q9HCK4 1378 aa7.84□□□□□ -1.15
CDH11-219ENST00000619158 KIF20BQ96Q89 1820 aa7.84□□□□□ -1.15
CDH11-219ENST00000619158 C14orf93Q9H972 538 aaKnown RBP7.84□□□□□ -1.15
CDH11-219ENST00000619158 ATP7BP35670 1465 aa7.84□□□□□ -1.15
CDH11-219ENST00000619158 PIK3C2AO00443 1686 aa7.84□□□□□ -1.15
CDH11-219ENST00000619158 ZNF335Q9H4Z2 1342 aaPredicted RBP7.84□□□□□ -1.15
CDH11-219ENST00000619158 COL18A1P39060 1754 aa7.84□□□□□ -1.15
CDH11-219ENST00000619158 LMO7Q8WWI1 1683 aa7.84□□□□□ -1.15
CDH11-219ENST00000619158 ADGRF5Q8IZF2 1346 aa7.83□□□□□ -1.16
CDH11-219ENST00000619158 TMEM132AQ24JP5 1023 aa7.83□□□□□ -1.16
CDH11-219ENST00000619158 CERKQ8TCT0 537 aa7.83□□□□□ -1.16
CDH11-219ENST00000619158 ATXN8OSP0DMR3 200 aa7.82□□□□□ -1.16
CDH11-219ENST00000619158 SLIT3O75094 1523 aa7.81□□□□□ -1.16
CDH11-219ENST00000619158 TXNDC2Q86VQ3 553 aa7.81□□□□□ -1.16
CDH11-219ENST00000619158 C1orf167Q5SNV9 1468 aa7.8□□□□□ -1.16
CDH11-219ENST00000619158 SSH2Q76I76 1423 aa7.8□□□□□ -1.16
CDH11-219ENST00000619158 TMEM94Q12767 1356 aa7.79□□□□□ -1.16
CDH11-219ENST00000619158 HDGFP51858 240 aaKnown RBP7.79□□□□□ -1.16
CDH11-219ENST00000619158 EID1Q9Y6B2 187 aa7.79□□□□□ -1.16
CDH11-219ENST00000619158 FAM208AQ9UK61 1670 aaKnown RBP7.79□□□□□ -1.16
CDH11-219ENST00000619158 CD163L1Q9NR16 1453 aa7.79□□□□□ -1.16
CDH11-219ENST00000619158 VGFO15240 615 aaPredicted RBP7.79□□□□□ -1.16
CDH11-219ENST00000619158 NPM2Q86SE8 214 aaKnown RBP7.79□□□□□ -1.16
CDH11-219ENST00000619158 FBXO41Q8TF61 875 aa7.79□□□□□ -1.16
CDH11-219ENST00000619158 ITGAEP38570 1179 aa7.79□□□□□ -1.16
CDH11-219ENST00000619158 BCL11AQ9H165 835 aa7.78□□□□□ -1.16
CDH11-219ENST00000619158 FBXO3Q9UK99 471 aa7.78□□□□□ -1.16
CDH11-219ENST00000619158 SAMD1Q6SPF0 538 aaPredicted RBP7.77□□□□□ -1.17
CDH11-219ENST00000619158 COL14A1Q05707 1796 aaKnown RBP7.77□□□□□ -1.17
CDH11-219ENST00000619158 POLR3AO14802 1390 aaPredicted RBP7.77□□□□□ -1.17
CDH11-219ENST00000619158 PLEKHH1Q9ULM0 1364 aa7.76□□□□□ -1.17
CDH11-219ENST00000619158 U3KPZ7 1027 aaPredicted RBP7.76□□□□□ -1.17
CDH11-219ENST00000619158 THSD7AQ9UPZ6 1657 aa7.76□□□□□ -1.17
CDH11-219ENST00000619158 BRD4O60885 1362 aaPredicted RBP7.75□□□□□ -1.17
CDH11-219ENST00000619158 LTN1O94822 1766 aa7.75□□□□□ -1.17
CDH11-219ENST00000619158 LRP6O75581 1613 aa7.75□□□□□ -1.17
CDH11-219ENST00000619158 NFAT5O94916 1531 aa7.75□□□□□ -1.17
CDH11-219ENST00000619158 SHANK3Q9BYB0 1731 aa7.74□□□□□ -1.17
CDH11-219ENST00000619158 TRIM52Q96A61 297 aa7.74□□□□□ -1.17
CDH11-219ENST00000619158 RGPD3A6NKT7 1758 aaPredicted RBP7.74□□□□□ -1.17
CDH11-219ENST00000619158 RGPD4Q7Z3J3 1758 aa7.74□□□□□ -1.17
CDH11-219ENST00000619158 CPSF1Q10570 1443 aaKnown RBP7.74□□□□□ -1.17
CDH11-219ENST00000619158 HAP1P54257 671 aaPredicted RBP7.73□□□□□ -1.17
CDH11-219ENST00000619158 PUS7Q96PZ0 661 aaKnown RBP7.73□□□□□ -1.17
CDH11-219ENST00000619158 EIF3AQ14152 1382 aaKnown RBP7.73□□□□□ -1.17
CDH11-219ENST00000619158 RGPD1P0DJD0 1748 aa7.73□□□□□ -1.17
CDH11-219ENST00000619158 PARP4Q9UKK3 1724 aaKnown RBP7.73□□□□□ -1.17
CDH11-219ENST00000619158 PEAK1Q9H792 1746 aa7.72□□□□□ -1.17
CDH11-219ENST00000619158 MSH6P52701 1360 aa7.72□□□□□ -1.17
CDH11-219ENST00000619158 AMOTL2Q9Y2J4 779 aa7.72□□□□□ -1.17
CDH11-219ENST00000619158 SBNO1A3KN83 1393 aa7.72□□□□□ -1.17
CDH11-219ENST00000619158 NBPF8Q3BBV2 869 aa7.71□□□□□ -1.18
CDH11-219ENST00000619158 RGPD5Q99666 1765 aa7.71□□□□□ -1.18
CDH11-219ENST00000619158 SOS2Q07890 1332 aaPredicted RBP7.7□□□□□ -1.18
CDH11-219ENST00000619158 L3MBTL2Q969R5 705 aa7.7□□□□□ -1.18
CDH11-219ENST00000619158 CDK12Q9NYV4 1490 aaPredicted RBP7.7□□□□□ -1.18
CDH11-219ENST00000619158 SPDYE4A6NLX3 237 aa7.7□□□□□ -1.18
CDH11-219ENST00000619158 SLC26A8Q96RN1 970 aa7.69□□□□□ -1.18
CDH11-219ENST00000619158 NINLQ9Y2I6 1382 aa7.69□□□□□ -1.18
CDH11-219ENST00000619158 C19orf44Q9H6X5 657 aa7.69□□□□□ -1.18
CDH11-219ENST00000619158 CICQ96RK0 1608 aaPredicted RBP7.68□□□□□ -1.18
CDH11-219ENST00000619158 PNPLA6Q8IY17 1366 aa7.68□□□□□ -1.18
CDH11-219ENST00000619158 PKD1L3Q7Z443 1732 aa7.68□□□□□ -1.18
CDH11-219ENST00000619158 CFAP70Q5T0N1 1121 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms