RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 SYNMO15061 1565 aa20.42■□□□□ 0.86
SEMA3B-214ENST00000619119 STAG3Q9UJ98 1225 aa20.41■□□□□ 0.86
SEMA3B-214ENST00000619119 KNSTRNQ9Y448 316 aa20.41■□□□□ 0.86
SEMA3B-214ENST00000619119 CDCA8Q53HL2 280 aa20.41■□□□□ 0.86
SEMA3B-214ENST00000619119 C14orf93Q9H972 538 aaKnown RBP20.4■□□□□ 0.86
SEMA3B-214ENST00000619119 NEURL4Q96JN8 1562 aa20.4■□□□□ 0.86
SEMA3B-214ENST00000619119 SAFB2Q14151 953 aaKnown RBP eCLIP20.4■□□□□ 0.86
SEMA3B-214ENST00000619119 ZMYM4Q5VZL5 1548 aa20.39■□□□□ 0.86
SEMA3B-214ENST00000619119 NLRP13Q86W25 1043 aa20.39■□□□□ 0.85
SEMA3B-214ENST00000619119 PANK2Q9BZ23 570 aa20.39■□□□□ 0.85
SEMA3B-214ENST00000619119 PARD3Q8TEW0 1356 aa20.39■□□□□ 0.85
SEMA3B-214ENST00000619119 IFT172Q9UG01 1749 aa20.39■□□□□ 0.85
SEMA3B-214ENST00000619119 VGFO15240 615 aaPredicted RBP20.38■□□□□ 0.85
SEMA3B-214ENST00000619119 RCAN3Q9UKA8 241 aa20.38■□□□□ 0.85
SEMA3B-214ENST00000619119 SLC52A1Q9NWF4 448 aa20.38■□□□□ 0.85
SEMA3B-214ENST00000619119 PIK3C2GO75747 1445 aa20.38■□□□□ 0.85
SEMA3B-214ENST00000619119 CENPJQ9HC77 1338 aaPredicted RBP20.38■□□□□ 0.85
SEMA3B-214ENST00000619119 STK26Q9P289 416 aa20.38■□□□□ 0.85
SEMA3B-214ENST00000619119 RPGRIP1LQ68CZ1 1315 aa20.37■□□□□ 0.85
SEMA3B-214ENST00000619119 NRXN1Q9ULB1 1477 aa20.37■□□□□ 0.85
SEMA3B-214ENST00000619119 BRD4O60885 1362 aaPredicted RBP20.37■□□□□ 0.85
SEMA3B-214ENST00000619119 ARHGAP31Q2M1Z3 1444 aa20.37■□□□□ 0.85
SEMA3B-214ENST00000619119 PRDM4Q9UKN5 801 aa20.36■□□□□ 0.85
SEMA3B-214ENST00000619119 XRCC6P12956 609 aaKnown RBP eCLIP20.36■□□□□ 0.85
SEMA3B-214ENST00000619119 KIAA1210Q9ULL0 1709 aa20.35■□□□□ 0.85
SEMA3B-214ENST00000619119 PPLO60437 1756 aa20.34■□□□□ 0.85
SEMA3B-214ENST00000619119 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
SEMA3B-214ENST00000619119 PLIN1O60240 522 aa20.34■□□□□ 0.85
SEMA3B-214ENST00000619119 ESF1Q9H501 851 aaKnown RBP20.34■□□□□ 0.85
SEMA3B-214ENST00000619119 CALD1Q05682 793 aaKnown RBP20.33■□□□□ 0.85
SEMA3B-214ENST00000619119 ERVK-7P63135 1459 aa20.32■□□□□ 0.84
SEMA3B-214ENST00000619119 SLKQ9H2G2 1235 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-214ENST00000619119 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-214ENST00000619119 PDCL3Q9H2J4 239 aa20.32■□□□□ 0.84
SEMA3B-214ENST00000619119 GOLGA6L3A6NEY3 463 aa20.31■□□□□ 0.84
SEMA3B-214ENST00000619119 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
SEMA3B-214ENST00000619119 GZF1Q9H116 711 aaPredicted RBP20.31■□□□□ 0.84
SEMA3B-214ENST00000619119 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
SEMA3B-214ENST00000619119 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
SEMA3B-214ENST00000619119 PREX1Q8TCU6 1659 aa20.3■□□□□ 0.84
SEMA3B-214ENST00000619119 NEXMIFQ5QGS0 1516 aa20.3■□□□□ 0.84
SEMA3B-214ENST00000619119 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
SEMA3B-214ENST00000619119 FAM161AQ3B820 660 aa20.29■□□□□ 0.84
SEMA3B-214ENST00000619119 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
SEMA3B-214ENST00000619119 SLC12A5Q9H2X9 1139 aa20.28■□□□□ 0.84
SEMA3B-214ENST00000619119 ADGRB1O14514 1584 aa20.27■□□□□ 0.84
SEMA3B-214ENST00000619119 MYO5BQ9ULV0 1848 aa20.27■□□□□ 0.84
SEMA3B-214ENST00000619119 C8orf34Q49A92 452 aa20.26■□□□□ 0.83
SEMA3B-214ENST00000619119 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
SEMA3B-214ENST00000619119 CLTCQ00610 1675 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-214ENST00000619119 LRPPRCP42704 1394 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-214ENST00000619119 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
SEMA3B-214ENST00000619119 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-214ENST00000619119 KDM5AP29375 1690 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-214ENST00000619119 BCL11BQ9C0K0 894 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-214ENST00000619119 SETBP1Q9Y6X0 1596 aa20.24■□□□□ 0.83
SEMA3B-214ENST00000619119 ESPNB1AK53 854 aa20.23■□□□□ 0.83
SEMA3B-214ENST00000619119 CABP2Q9NPB3 220 aa20.23■□□□□ 0.83
SEMA3B-214ENST00000619119 TPM2P07951 284 aa20.23■□□□□ 0.83
SEMA3B-214ENST00000619119 ERBB4Q15303 1308 aa20.23■□□□□ 0.83
SEMA3B-214ENST00000619119 AGLP35573 1532 aa20.23■□□□□ 0.83
SEMA3B-214ENST00000619119 MYOM1P52179 1685 aa20.22■□□□□ 0.83
SEMA3B-214ENST00000619119 TNNT2P45379 298 aaPredicted RBP20.22■□□□□ 0.83
SEMA3B-214ENST00000619119 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
SEMA3B-214ENST00000619119 PPP6R1Q9UPN7 881 aa20.22■□□□□ 0.83
SEMA3B-214ENST00000619119 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
SEMA3B-214ENST00000619119 ASXL1Q8IXJ9 1541 aa20.21■□□□□ 0.83
SEMA3B-214ENST00000619119 ARHGEF40Q8TER5 1519 aa20.21■□□□□ 0.83
SEMA3B-214ENST00000619119 ZMYM3Q14202 1370 aa20.2■□□□□ 0.82
SEMA3B-214ENST00000619119 ARID3AQ99856 593 aa20.2■□□□□ 0.82
SEMA3B-214ENST00000619119 SBNO2Q9Y2G9 1366 aa20.19■□□□□ 0.82
SEMA3B-214ENST00000619119 PRAM1Q96QH2 718 aa20.19■□□□□ 0.82
SEMA3B-214ENST00000619119 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
SEMA3B-214ENST00000619119 REREQ9P2R6 1566 aa20.19■□□□□ 0.82
SEMA3B-214ENST00000619119 QRICH2Q9H0J4 1663 aa20.18■□□□□ 0.82
SEMA3B-214ENST00000619119 SRPK2P78362 688 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-214ENST00000619119 EVC2Q86UK5 1308 aa20.18■□□□□ 0.82
SEMA3B-214ENST00000619119 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.828e-7■■□□□ 12.2
SEMA3B-214ENST00000619119 FSD2A1L4K1 749 aa20.16■□□□□ 0.82
SEMA3B-214ENST00000619119 CEBPAP49715 358 aaPredicted RBP20.16■□□□□ 0.82
SEMA3B-214ENST00000619119 CDCA7LQ96GN5 454 aa20.16■□□□□ 0.82
SEMA3B-214ENST00000619119 MYO3AQ8NEV4 1616 aa20.16■□□□□ 0.82
SEMA3B-214ENST00000619119 KIAA1211Q6ZU35 1233 aa20.16■□□□□ 0.82
SEMA3B-214ENST00000619119 NSD3Q9BZ95 1437 aa20.15■□□□□ 0.82
SEMA3B-214ENST00000619119 MYH16Q9H6N6 1097 aa20.15■□□□□ 0.82
SEMA3B-214ENST00000619119 ZHX1Q9UKY1 873 aaPredicted RBP20.15■□□□□ 0.82
SEMA3B-214ENST00000619119 ZFYVE9O95405 1425 aa20.15■□□□□ 0.82
SEMA3B-214ENST00000619119 TRIM44Q96DX7 344 aaPredicted RBP20.14■□□□□ 0.81
SEMA3B-214ENST00000619119 PDIA4P13667 645 aaKnown RBP20.13■□□□□ 0.81
SEMA3B-214ENST00000619119 A2ML1A8K2U0 1454 aa20.13■□□□□ 0.81
SEMA3B-214ENST00000619119 C20orf194Q5TEA3 1177 aa20.12■□□□□ 0.81
SEMA3B-214ENST00000619119 RIMS2Q9UQ26 1411 aa20.12■□□□□ 0.81
SEMA3B-214ENST00000619119 WAPLQ7Z5K2 1190 aa20.12■□□□□ 0.81
SEMA3B-214ENST00000619119 YTHDC2Q9H6S0 1430 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-214ENST00000619119 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
SEMA3B-214ENST00000619119 MORC1Q86VD1 984 aa20.11■□□□□ 0.81
SEMA3B-214ENST00000619119 ARHGEF28Q8N1W1 1705 aaKnown RBP20.11■□□□□ 0.81
SEMA3B-214ENST00000619119 BECN1Q14457 450 aa20.1■□□□□ 0.81
SEMA3B-214ENST00000619119 SPATA31D1Q6ZQQ2 1576 aa20.1■□□□□ 0.81
SEMA3B-214ENST00000619119 FAM13BQ9NYF5 915 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms