RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 DLC1Q96QB1 1528 aa15.24■□□□□ 0.03
CPEB1-216ENST00000618449 SLC12A5Q9H2X9 1139 aa15.24■□□□□ 0.03
CPEB1-216ENST00000618449 SLIT1O75093 1534 aa15.23■□□□□ 0.03
CPEB1-216ENST00000618449 ARHGAP23Q9P227 1491 aa15.23■□□□□ 0.03
CPEB1-216ENST00000618449 BRD4O60885 1362 aaPredicted RBP15.23■□□□□ 0.03
CPEB1-216ENST00000618449 PLEKHG1Q9ULL1 1385 aa15.23■□□□□ 0.03
CPEB1-216ENST00000618449 CARD14Q9BXL6 1004 aa15.23■□□□□ 0.03
CPEB1-216ENST00000618449 CABP2Q9NPB3 220 aa15.23■□□□□ 0.03
CPEB1-216ENST00000618449 NLRP13Q86W25 1043 aa15.23■□□□□ 0.03
CPEB1-216ENST00000618449 THEMISQ8N1K5 641 aaPredicted RBP15.23■□□□□ 0.03
CPEB1-216ENST00000618449 ADAMTS13Q76LX8 1427 aa15.22■□□□□ 0.03
CPEB1-216ENST00000618449 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
CPEB1-216ENST00000618449 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
CPEB1-216ENST00000618449 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.03
CPEB1-216ENST00000618449 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.03
CPEB1-216ENST00000618449 SRPK2P78362 688 aaKnown RBP15.21■□□□□ 0.02
CPEB1-216ENST00000618449 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
CPEB1-216ENST00000618449 CEP170BQ9Y4F5 1589 aaPredicted RBP15.2■□□□□ 0.02
CPEB1-216ENST00000618449 ZBED9Q6R2W3 1325 aa15.19■□□□□ 0.02
CPEB1-216ENST00000618449 TECPR2O15040 1411 aa15.18■□□□□ 0.02
CPEB1-216ENST00000618449 SLC26A8Q96RN1 970 aa15.18■□□□□ 0.02
CPEB1-216ENST00000618449 MED14O60244 1454 aa15.18■□□□□ 0.02
CPEB1-216ENST00000618449 NSD3Q9BZ95 1437 aa15.17■□□□□ 0.02
CPEB1-216ENST00000618449 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
CPEB1-216ENST00000618449 CDK19Q9BWU1 502 aa15.17■□□□□ 0.02
CPEB1-216ENST00000618449 SIRT1Q96EB6 747 aa15.16■□□□□ 0.02
CPEB1-216ENST00000618449 FAM135BQ49AJ0 1406 aa15.16■□□□□ 0.02
CPEB1-216ENST00000618449 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
CPEB1-216ENST00000618449 ANKRD36BQ8N2N9 1353 aa15.16■□□□□ 0.02
CPEB1-216ENST00000618449 CPS1P31327 1500 aa15.16■□□□□ 0.02
CPEB1-216ENST00000618449 PPP2R1AP30153 589 aa15.16■□□□□ 0.02
CPEB1-216ENST00000618449 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
CPEB1-216ENST00000618449 ROBO2Q9HCK4 1378 aa15.14■□□□□ 0.01
CPEB1-216ENST00000618449 TBX22Q9Y458 520 aa15.14■□□□□ 0.01
CPEB1-216ENST00000618449 PTPRUQ92729 1446 aa15.13■□□□□ 0.01
CPEB1-216ENST00000618449 ZNF142P52746 1687 aaPredicted RBP15.12■□□□□ 0.01
CPEB1-216ENST00000618449 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
CPEB1-216ENST00000618449 BCL11AQ9H165 835 aa15.12■□□□□ 0.01
CPEB1-216ENST00000618449 SETD1BQ9UPS6 1966 aaKnown RBP15.12■□□□□ 0.01
CPEB1-216ENST00000618449 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
CPEB1-216ENST00000618449 USP32Q8NFA0 1604 aa15.11■□□□□ 0.01
CPEB1-216ENST00000618449 CD163L1Q9NR16 1453 aa15.1■□□□□ 0.01
CPEB1-216ENST00000618449 CGNL1Q0VF96 1302 aa15.1■□□□□ 0.01
CPEB1-216ENST00000618449 CABP1Q9NZU7 370 aa15.1■□□□□ 0.01
CPEB1-216ENST00000618449 AMOTL2Q9Y2J4 779 aa15.1■□□□□ 0.01
CPEB1-216ENST00000618449 DIP2AQ14689 1571 aa15.1■□□□□ 0.01
CPEB1-216ENST00000618449 TERF2IPQ9NYB0 399 aa15.09■□□□□ 0.01
CPEB1-216ENST00000618449 ANKLE2Q86XL3 938 aa15.08■□□□□ 0.01
CPEB1-216ENST00000618449 MORC1Q86VD1 984 aa15.08■□□□□ 0
CPEB1-216ENST00000618449 TSHZ2Q9NRE2 1034 aa15.08■□□□□ 0
CPEB1-216ENST00000618449 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
CPEB1-216ENST00000618449 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.07■□□□□ 0
CPEB1-216ENST00000618449 HDGFL2Q7Z4V5 671 aaPredicted RBP15.06■□□□□ 0
CPEB1-216ENST00000618449 NSD2O96028 1365 aa15.06■□□□□ 0
CPEB1-216ENST00000618449 PTCH1Q13635 1447 aa15.05■□□□□ 0
CPEB1-216ENST00000618449 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ 0
CPEB1-216ENST00000618449 NUDT16Q96DE0 195 aaKnown RBP15.05■□□□□ 0
CPEB1-216ENST00000618449 TNNT2P45379 298 aaPredicted RBP15.05■□□□□ -0
CPEB1-216ENST00000618449 IRX6P78412 446 aaPredicted RBP15.05■□□□□ -0
CPEB1-216ENST00000618449 PPIP5K1Q6PFW1 1433 aa15.04■□□□□ -0
CPEB1-216ENST00000618449 ATP7BP35670 1465 aa15.04■□□□□ -0
CPEB1-216ENST00000618449 ADGRB2O60241 1585 aa15.04■□□□□ -0
CPEB1-216ENST00000618449 NCKAP5LQ9HCH0 1330 aa15.04■□□□□ -0
CPEB1-216ENST00000618449 PIK3R4Q99570 1358 aa15.03■□□□□ -0
CPEB1-216ENST00000618449 XRN1Q8IZH2 1706 aaKnown RBP15.03■□□□□ -0
CPEB1-216ENST00000618449 ADAMTS8Q9UP79 889 aa15.03■□□□□ -0
CPEB1-216ENST00000618449 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
CPEB1-216ENST00000618449 PRR36Q9H6K5 1346 aa15.03■□□□□ -0
CPEB1-216ENST00000618449 INSRP06213 1382 aa15.02■□□□□ -0
CPEB1-216ENST00000618449 FYB1O15117 783 aa15.02■□□□□ -0
CPEB1-216ENST00000618449 KCNA6P17658 529 aa15.02■□□□□ -0
CPEB1-216ENST00000618449 ERICH6BQ5W0A0 696 aa15.02■□□□□ -0
CPEB1-216ENST00000618449 GGNBP2Q9H3C7 697 aa15.02■□□□□ -0
CPEB1-216ENST00000618449 BLMP54132 1417 aaPredicted RBP15.02■□□□□ -0
CPEB1-216ENST00000618449 WDR43Q15061 677 aaKnown RBP eCLIP15.02□□□□□ -0.01
CPEB1-216ENST00000618449 CPSF1Q10570 1443 aaKnown RBP15.01□□□□□ -0.01
CPEB1-216ENST00000618449 ANP32EQ9BTT0 268 aa15□□□□□ -0.01
CPEB1-216ENST00000618449 POLR3AO14802 1390 aaPredicted RBP15□□□□□ -0.01
CPEB1-216ENST00000618449 NUDCQ9Y266 331 aa15□□□□□ -0.01
CPEB1-216ENST00000618449 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
CPEB1-216ENST00000618449 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.01
CPEB1-216ENST00000618449 NPHP4O75161 1426 aaPredicted RBP14.98□□□□□ -0.01
CPEB1-216ENST00000618449 CDC42BPGQ6DT37 1551 aa14.98□□□□□ -0.01
CPEB1-216ENST00000618449 MTHFSP49914 203 aa14.98□□□□□ -0.01
CPEB1-216ENST00000618449 SALL2Q9Y467 1007 aaPredicted RBP14.98□□□□□ -0.01
CPEB1-216ENST00000618449 CHD2O14647 1828 aaKnown RBP14.97□□□□□ -0.01
CPEB1-216ENST00000618449 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
CPEB1-216ENST00000618449 EDC4Q6P2E9 1401 aaKnown RBP14.97□□□□□ -0.01
CPEB1-216ENST00000618449 KIF20BQ96Q89 1820 aa14.96□□□□□ -0.01
CPEB1-216ENST00000618449 TOPAZ1Q8N9V7 1692 aa14.96□□□□□ -0.02
CPEB1-216ENST00000618449 PPP4R2Q9NY27 417 aa14.95□□□□□ -0.02
CPEB1-216ENST00000618449 MON2Q7Z3U7 1717 aa14.95□□□□□ -0.02
CPEB1-216ENST00000618449 ZNF692Q9BU19 519 aaPredicted RBP14.94□□□□□ -0.02
CPEB1-216ENST00000618449 AKAP12Q02952 1782 aa14.94□□□□□ -0.02
CPEB1-216ENST00000618449 PLEKHG3A1L390 1219 aa14.94□□□□□ -0.02
CPEB1-216ENST00000618449 ITSN1Q15811 1721 aa14.94□□□□□ -0.02
CPEB1-216ENST00000618449 ACEP12821 1306 aa14.94□□□□□ -0.02
CPEB1-216ENST00000618449 NKTRP30414 1462 aaKnown RBP14.94□□□□□ -0.02
CPEB1-216ENST00000618449 SHPRHQ149N8 1683 aa14.93□□□□□ -0.02
CPEB1-216ENST00000618449 NME9Q86XW9 330 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms