RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 FMN1Q68DA7 1419 aa11.67□□□□□ -0.54
SCAMP1-206ENST00000618166 DEFB132Q7Z7B7 95 aa11.67□□□□□ -0.54
SCAMP1-206ENST00000618166 ERVK-7P63135 1459 aa11.66□□□□□ -0.54
SCAMP1-206ENST00000618166 KIAA1107Q9UPP5 1409 aa11.66□□□□□ -0.54
SCAMP1-206ENST00000618166 NGLY1Q96IV0 654 aa11.65□□□□□ -0.55
SCAMP1-206ENST00000618166 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.55
SCAMP1-206ENST00000618166 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
SCAMP1-206ENST00000618166 MAST1Q9Y2H9 1570 aa11.64□□□□□ -0.55
SCAMP1-206ENST00000618166 KDM5AP29375 1690 aaKnown RBP11.64□□□□□ -0.55
SCAMP1-206ENST00000618166 NKTRP30414 1462 aaKnown RBP11.64□□□□□ -0.55
SCAMP1-206ENST00000618166 HRCP23327 699 aa11.64□□□□□ -0.55
SCAMP1-206ENST00000618166 NHSL1Q5SYE7 1610 aa11.63□□□□□ -0.55
SCAMP1-206ENST00000618166 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
SCAMP1-206ENST00000618166 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
SCAMP1-206ENST00000618166 ZNF644Q9H582 1327 aaPredicted RBP11.63□□□□□ -0.55
SCAMP1-206ENST00000618166 MARVELD3Q96A59 401 aa11.62□□□□□ -0.55
SCAMP1-206ENST00000618166 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
SCAMP1-206ENST00000618166 ABCC3O15438 1527 aa11.61□□□□□ -0.55
SCAMP1-206ENST00000618166 TET3O43151 1660 aa11.61□□□□□ -0.55
SCAMP1-206ENST00000618166 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
SCAMP1-206ENST00000618166 ARHGAP35Q9NRY4 1499 aa11.61□□□□□ -0.55
SCAMP1-206ENST00000618166 ADAMTS2O95450 1211 aa11.6□□□□□ -0.55
SCAMP1-206ENST00000618166 PLEKHH2Q8IVE3 1493 aa11.6□□□□□ -0.55
SCAMP1-206ENST00000618166 BRINP3Q76B58 766 aa11.59□□□□□ -0.55
SCAMP1-206ENST00000618166 CFDP1Q9UEE9 299 aaPredicted RBP11.59□□□□□ -0.55
SCAMP1-206ENST00000618166 TMEM2Q9UHN6 1383 aa11.59□□□□□ -0.55
SCAMP1-206ENST00000618166 MBD5Q9P267 1494 aa11.58□□□□□ -0.56
SCAMP1-206ENST00000618166 RTEL1-TNFRSF6BF6WH68 1400 aa11.57□□□□□ -0.56
SCAMP1-206ENST00000618166 BLMP54132 1417 aaPredicted RBP11.57□□□□□ -0.56
SCAMP1-206ENST00000618166 USP21Q9UK80 565 aa11.57□□□□□ -0.56
SCAMP1-206ENST00000618166 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
SCAMP1-206ENST00000618166 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
SCAMP1-206ENST00000618166 DDX17Q92841 729 aaKnown RBP11.56□□□□□ -0.56
SCAMP1-206ENST00000618166 TRPC5Q9UL62 973 aaPredicted RBP11.55□□□□□ -0.56
SCAMP1-206ENST00000618166 PIK3C2BO00750 1634 aa11.55□□□□□ -0.56
SCAMP1-206ENST00000618166 ATRNO75882 1429 aa11.55□□□□□ -0.56
SCAMP1-206ENST00000618166 CEP350Q5VT06 3117 aa11.55□□□□□ -0.56
SCAMP1-206ENST00000618166 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
SCAMP1-206ENST00000618166 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.53□□□□□ -0.56
SCAMP1-206ENST00000618166 ASXL1Q8IXJ9 1541 aa11.53□□□□□ -0.56
SCAMP1-206ENST00000618166 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
SCAMP1-206ENST00000618166 CCDC18Q5T9S5 1454 aa11.52□□□□□ -0.57
SCAMP1-206ENST00000618166 PYGBP11216 843 aa11.52□□□□□ -0.57
SCAMP1-206ENST00000618166 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
SCAMP1-206ENST00000618166 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
SCAMP1-206ENST00000618166 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.57
SCAMP1-206ENST00000618166 CCNB3Q8WWL7 1395 aa11.51□□□□□ -0.57
SCAMP1-206ENST00000618166 ATF3P18847 181 aa11.51□□□□□ -0.57
SCAMP1-206ENST00000618166 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
SCAMP1-206ENST00000618166 BCANQ96GW7 911 aa11.51□□□□□ -0.57
SCAMP1-206ENST00000618166 PCDHB8Q9UN66 801 aa11.51□□□□□ -0.57
SCAMP1-206ENST00000618166 CEP152O94986 1710 aa11.5□□□□□ -0.57
SCAMP1-206ENST00000618166 EMP3P54852 163 aa11.5□□□□□ -0.57
SCAMP1-206ENST00000618166 LRRC59Q96AG4 307 aaKnown RBP11.5□□□□□ -0.57
SCAMP1-206ENST00000618166 MROH1Q8NDA8 1641 aa11.5□□□□□ -0.57
SCAMP1-206ENST00000618166 EFCAB6Q5THR3 1501 aa11.49□□□□□ -0.57
SCAMP1-206ENST00000618166 R3HDM1Q15032 1099 aaKnown RBP11.49□□□□□ -0.57
SCAMP1-206ENST00000618166 FNBP4Q8N3X1 1017 aaPredicted RBP11.49□□□□□ -0.57
SCAMP1-206ENST00000618166 ZNF784Q8NCA9 323 aaPredicted RBP11.49□□□□□ -0.57
SCAMP1-206ENST00000618166 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
SCAMP1-206ENST00000618166 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
SCAMP1-206ENST00000618166 C19orf44Q9H6X5 657 aa11.49□□□□□ -0.57
SCAMP1-206ENST00000618166 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
SCAMP1-206ENST00000618166 CHD2O14647 1828 aaKnown RBP11.47□□□□□ -0.57
SCAMP1-206ENST00000618166 POTEB3A0JP26 581 aa11.47□□□□□ -0.57
SCAMP1-206ENST00000618166 C1QTNF8P60827 252 aa11.47□□□□□ -0.57
SCAMP1-206ENST00000618166 SF3B2Q13435 895 aaKnown RBP11.47□□□□□ -0.57
SCAMP1-206ENST00000618166 POTEBQ6S5H4 581 aa11.47□□□□□ -0.57
SCAMP1-206ENST00000618166 NCOA3Q9Y6Q9 1424 aa11.47□□□□□ -0.57
SCAMP1-206ENST00000618166 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.57
SCAMP1-206ENST00000618166 L3MBTL3Q96JM7 780 aaPredicted RBP11.46□□□□□ -0.57
SCAMP1-206ENST00000618166 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
SCAMP1-206ENST00000618166 CCDC141Q6ZP82 1450 aa11.45□□□□□ -0.58
SCAMP1-206ENST00000618166 UTRNP46939 3433 aa11.45□□□□□ -0.58
SCAMP1-206ENST00000618166 IDI1Q13907 227 aa11.44□□□□□ -0.58
SCAMP1-206ENST00000618166 GJD4Q96KN9 370 aaPredicted RBP11.44□□□□□ -0.58
SCAMP1-206ENST00000618166 MST1RQ04912 1400 aa11.44□□□□□ -0.58
SCAMP1-206ENST00000618166 UNC13BO14795 1591 aa11.42□□□□□ -0.58
SCAMP1-206ENST00000618166 GLI3P10071 1580 aa11.42□□□□□ -0.58
SCAMP1-206ENST00000618166 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
SCAMP1-206ENST00000618166 UBTFP17480 764 aaKnown RBP11.41□□□□□ -0.58
SCAMP1-206ENST00000618166 BRWD3Q6RI45 1802 aa11.41□□□□□ -0.58
SCAMP1-206ENST00000618166 CAMTA1Q9Y6Y1 1673 aa11.41□□□□□ -0.58
SCAMP1-206ENST00000618166 RALGAPBQ86X10 1494 aa11.41□□□□□ -0.58
SCAMP1-206ENST00000618166 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
SCAMP1-206ENST00000618166 PTCH1Q13635 1447 aa11.4□□□□□ -0.58
SCAMP1-206ENST00000618166 ARHGAP31Q2M1Z3 1444 aa11.4□□□□□ -0.58
SCAMP1-206ENST00000618166 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.59
SCAMP1-206ENST00000618166 PLEKHG1Q9ULL1 1385 aa11.39□□□□□ -0.59
SCAMP1-206ENST00000618166 BAG6P46379 1132 aa11.39□□□□□ -0.59
SCAMP1-206ENST00000618166 ADGRB3O60242 1522 aa11.38□□□□□ -0.59
SCAMP1-206ENST00000618166 ZFYVE9O95405 1425 aa11.37□□□□□ -0.59
SCAMP1-206ENST00000618166 EEA1Q15075 1411 aa11.37□□□□□ -0.59
SCAMP1-206ENST00000618166 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
SCAMP1-206ENST00000618166 ZNF467Q7Z7K2 595 aaPredicted RBP11.37□□□□□ -0.59
SCAMP1-206ENST00000618166 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
SCAMP1-206ENST00000618166 DCCP43146 1447 aa11.37□□□□□ -0.59
SCAMP1-206ENST00000618166 PTPRUQ92729 1446 aa11.37□□□□□ -0.59
SCAMP1-206ENST00000618166 FYCO1Q9BQS8 1478 aa11.37□□□□□ -0.59
SCAMP1-206ENST00000618166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.595e-8■□□□□ 9.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms