RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 TXNDC2Q86VQ3 553 aa16.45■□□□□ 0.22
TULP4-206ENST00000616856 SETD1AO15047 1707 aaKnown RBP16.45■□□□□ 0.22
TULP4-206ENST00000616856 SBNO2Q9Y2G9 1366 aa16.45■□□□□ 0.22
TULP4-206ENST00000616856 THEMISQ8N1K5 641 aaPredicted RBP16.44■□□□□ 0.22
TULP4-206ENST00000616856 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
TULP4-206ENST00000616856 EID1Q9Y6B2 187 aa16.44■□□□□ 0.22
TULP4-206ENST00000616856 CEP170BQ9Y4F5 1589 aaPredicted RBP16.43■□□□□ 0.22
TULP4-206ENST00000616856 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
TULP4-206ENST00000616856 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
TULP4-206ENST00000616856 PRAM1Q96QH2 718 aa16.42■□□□□ 0.22
TULP4-206ENST00000616856 METP08581 1390 aa16.42■□□□□ 0.22
TULP4-206ENST00000616856 SLIT1O75093 1534 aa16.41■□□□□ 0.22
TULP4-206ENST00000616856 POGKQ9P215 609 aa16.41■□□□□ 0.22
TULP4-206ENST00000616856 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
TULP4-206ENST00000616856 ARHGAP23Q9P227 1491 aa16.41■□□□□ 0.22
TULP4-206ENST00000616856 ANP32EQ9BTT0 268 aa16.4■□□□□ 0.22
TULP4-206ENST00000616856 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
TULP4-206ENST00000616856 MYOM1P52179 1685 aa16.39■□□□□ 0.21
TULP4-206ENST00000616856 SLC26A8Q96RN1 970 aa16.39■□□□□ 0.21
TULP4-206ENST00000616856 ADAMTS13Q76LX8 1427 aa16.38■□□□□ 0.21
TULP4-206ENST00000616856 MINK1Q8N4C8 1332 aaPredicted RBP16.38■□□□□ 0.21
TULP4-206ENST00000616856 WAPLQ7Z5K2 1190 aa16.37■□□□□ 0.21
TULP4-206ENST00000616856 EVC2Q86UK5 1308 aa16.37■□□□□ 0.21
TULP4-206ENST00000616856 TULP4Q9NRJ4 1543 aa16.37■□□□□ 0.21
TULP4-206ENST00000616856 SETD1BQ9UPS6 1966 aaKnown RBP16.37■□□□□ 0.21
TULP4-206ENST00000616856 ABCC11Q96J66 1382 aa16.36■□□□□ 0.21
TULP4-206ENST00000616856 ZNF142P52746 1687 aaPredicted RBP16.35■□□□□ 0.21
TULP4-206ENST00000616856 PLEKHH1Q9ULM0 1364 aa16.35■□□□□ 0.21
TULP4-206ENST00000616856 INSRP06213 1382 aa16.35■□□□□ 0.21
TULP4-206ENST00000616856 FANCIQ9NVI1 1328 aa16.35■□□□□ 0.21
TULP4-206ENST00000616856 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
TULP4-206ENST00000616856 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
TULP4-206ENST00000616856 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
TULP4-206ENST00000616856 SRPK2P78362 688 aaKnown RBP16.33■□□□□ 0.2
TULP4-206ENST00000616856 PDE3BQ13370 1112 aa16.33■□□□□ 0.2
TULP4-206ENST00000616856 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
TULP4-206ENST00000616856 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
TULP4-206ENST00000616856 SLC12A5Q9H2X9 1139 aa16.32■□□□□ 0.2
TULP4-206ENST00000616856 BLMP54132 1417 aaPredicted RBP16.32■□□□□ 0.2
TULP4-206ENST00000616856 MED14O60244 1454 aa16.32■□□□□ 0.2
TULP4-206ENST00000616856 KNDC1Q76NI1 1749 aa16.31■□□□□ 0.2
TULP4-206ENST00000616856 ANKLE2Q86XL3 938 aa16.3■□□□□ 0.2
TULP4-206ENST00000616856 TECPR2O15040 1411 aa16.29■□□□□ 0.2
TULP4-206ENST00000616856 PPP2R1AP30153 589 aa16.29■□□□□ 0.2
TULP4-206ENST00000616856 CPS1P31327 1500 aa16.29■□□□□ 0.2
TULP4-206ENST00000616856 PTPRUQ92729 1446 aa16.29■□□□□ 0.2
TULP4-206ENST00000616856 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
TULP4-206ENST00000616856 CDK19Q9BWU1 502 aa16.29■□□□□ 0.2
TULP4-206ENST00000616856 ADAMTS8Q9UP79 889 aa16.29■□□□□ 0.2
TULP4-206ENST00000616856 TBX22Q9Y458 520 aa16.29■□□□□ 0.2
TULP4-206ENST00000616856 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
TULP4-206ENST00000616856 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
TULP4-206ENST00000616856 CCDC136Q96JN2 1154 aa16.27■□□□□ 0.2
TULP4-206ENST00000616856 PUS7Q96PZ0 661 aaKnown RBP16.27■□□□□ 0.2
TULP4-206ENST00000616856 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.2
TULP4-206ENST00000616856 DIP2AQ14689 1571 aa16.27■□□□□ 0.19
TULP4-206ENST00000616856 MSH5O43196 834 aa16.27■□□□□ 0.19
TULP4-206ENST00000616856 RRP1P56182 461 aaKnown RBP16.27■□□□□ 0.19
TULP4-206ENST00000616856 RCAN3Q9UKA8 241 aa16.27■□□□□ 0.19
TULP4-206ENST00000616856 SIRT1Q96EB6 747 aa16.25■□□□□ 0.19
TULP4-206ENST00000616856 ATAD2Q6PL18 1390 aa16.25■□□□□ 0.19
TULP4-206ENST00000616856 NSD3Q9BZ95 1437 aa16.24■□□□□ 0.19
TULP4-206ENST00000616856 KDM4FA0A1W2PPD8 638 aa16.23■□□□□ 0.19
TULP4-206ENST00000616856 WASLO00401 505 aaPredicted RBP16.23■□□□□ 0.19
TULP4-206ENST00000616856 EXOC6Q8TAG9 804 aa16.23■□□□□ 0.19
TULP4-206ENST00000616856 ANKRD36BQ8N2N9 1353 aa16.22■□□□□ 0.19
TULP4-206ENST00000616856 NCKAP5LQ9HCH0 1330 aa16.22■□□□□ 0.19
TULP4-206ENST00000616856 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.18
TULP4-206ENST00000616856 KCNA6P17658 529 aa16.2■□□□□ 0.18
TULP4-206ENST00000616856 CABP1Q9NZU7 370 aa16.2■□□□□ 0.18
TULP4-206ENST00000616856 NPHP4O75161 1426 aaPredicted RBP16.2■□□□□ 0.18
TULP4-206ENST00000616856 A0A1W2PP64 1363 aa16.2■□□□□ 0.18
TULP4-206ENST00000616856 NINLQ9Y2I6 1382 aa16.2■□□□□ 0.18
TULP4-206ENST00000616856 PLIN1O60240 522 aa16.2■□□□□ 0.18
TULP4-206ENST00000616856 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
TULP4-206ENST00000616856 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
TULP4-206ENST00000616856 NPC1L1Q9UHC9 1359 aa16.19■□□□□ 0.18
TULP4-206ENST00000616856 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
TULP4-206ENST00000616856 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
TULP4-206ENST00000616856 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
TULP4-206ENST00000616856 TERF2IPQ9NYB0 399 aa16.17■□□□□ 0.18
TULP4-206ENST00000616856 CD163L1Q9NR16 1453 aa16.17■□□□□ 0.18
TULP4-206ENST00000616856 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
TULP4-206ENST00000616856 HSPA2P54652 639 aa16.16■□□□□ 0.18
TULP4-206ENST00000616856 CCDC146Q8IYE0 955 aa16.16■□□□□ 0.18
TULP4-206ENST00000616856 CGNL1Q0VF96 1302 aa16.16■□□□□ 0.18
TULP4-206ENST00000616856 PPIP5K1Q6PFW1 1433 aa16.16■□□□□ 0.18
TULP4-206ENST00000616856 HDGFL2Q7Z4V5 671 aaPredicted RBP16.16■□□□□ 0.18
TULP4-206ENST00000616856 ADGRB2O60241 1585 aa16.15■□□□□ 0.18
TULP4-206ENST00000616856 CHD2O14647 1828 aaKnown RBP16.15■□□□□ 0.18
TULP4-206ENST00000616856 ZNF521Q96K83 1311 aa16.14■□□□□ 0.17
TULP4-206ENST00000616856 PRR36Q9H6K5 1346 aa16.14■□□□□ 0.17
TULP4-206ENST00000616856 RBM33Q96EV2 1170 aaKnown RBP16.14■□□□□ 0.17
TULP4-206ENST00000616856 ATP7BP35670 1465 aa16.14■□□□□ 0.17
TULP4-206ENST00000616856 USP32Q8NFA0 1604 aa16.14■□□□□ 0.17
TULP4-206ENST00000616856 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
TULP4-206ENST00000616856 CCDC61Q9Y6R9 512 aa16.13■□□□□ 0.17
TULP4-206ENST00000616856 MORC1Q86VD1 984 aa16.13■□□□□ 0.17
TULP4-206ENST00000616856 DUSP27Q5VZP5 1158 aa16.12■□□□□ 0.17
TULP4-206ENST00000616856 C20orf194Q5TEA3 1177 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms