RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CCDC146Q8IYE0 955 aa12.07□□□□□ -0.48
TNFRSF9-204ENST00000615230 STRN4Q9NRL3 753 aa12.07□□□□□ -0.48
TNFRSF9-204ENST00000615230 KIF16BQ96L93 1317 aa12.06□□□□□ -0.48
TNFRSF9-204ENST00000615230 RIPK4P57078 832 aa12.06□□□□□ -0.48
TNFRSF9-204ENST00000615230 SYNE3Q6ZMZ3 975 aa12.06□□□□□ -0.48
TNFRSF9-204ENST00000615230 CABP4P57796 275 aa12.05□□□□□ -0.48
TNFRSF9-204ENST00000615230 TRIM6-TRIM34B2RNG4 842 aa12.05□□□□□ -0.48
TNFRSF9-204ENST00000615230 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF9-204ENST00000615230 KDM5BQ9UGL1 1544 aa12.05□□□□□ -0.48
TNFRSF9-204ENST00000615230 A2MP01023 1474 aa12.05□□□□□ -0.48
TNFRSF9-204ENST00000615230 CCDC30Q5VVM6 783 aa12.05□□□□□ -0.48
TNFRSF9-204ENST00000615230 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
TNFRSF9-204ENST00000615230 NUP160Q12769 1436 aa12.05□□□□□ -0.48
TNFRSF9-204ENST00000615230 CFAP70Q5T0N1 1121 aa12.04□□□□□ -0.48
TNFRSF9-204ENST00000615230 TMEM132EQ6IEE7 984 aa12.04□□□□□ -0.48
TNFRSF9-204ENST00000615230 EIF2S2P20042 333 aaKnown RBP12.04□□□□□ -0.48
TNFRSF9-204ENST00000615230 G3BP1Q13283 466 aaKnown RBP eCLIP12.04□□□□□ -0.48
TNFRSF9-204ENST00000615230 UHRF1BP1LA0JNW5 1464 aa12.04□□□□□ -0.48
TNFRSF9-204ENST00000615230 CHAF1AQ13111 956 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF9-204ENST00000615230 MFAP1P55081 439 aaKnown RBP12.03□□□□□ -0.48
TNFRSF9-204ENST00000615230 TPM4P67936 248 aa12.03□□□□□ -0.48
TNFRSF9-204ENST00000615230 DDX19BQ9UMR2 479 aa12.03□□□□□ -0.48
TNFRSF9-204ENST00000615230 AKAP17AQ02040 695 aaKnown RBP12.02□□□□□ -0.48
TNFRSF9-204ENST00000615230 KIAA2012Q0VF49 1180 aa12.02□□□□□ -0.48
TNFRSF9-204ENST00000615230 GNL3LQ9NVN8 582 aaKnown RBP12.02□□□□□ -0.49
TNFRSF9-204ENST00000615230 TCEAL9Q9UHQ7 104 aa12.02□□□□□ -0.49
TNFRSF9-204ENST00000615230 ABCC5O15440 1437 aa12.02□□□□□ -0.49
TNFRSF9-204ENST00000615230 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
TNFRSF9-204ENST00000615230 UHRF1BP1Q6BDS2 1440 aa12.02□□□□□ -0.49
TNFRSF9-204ENST00000615230 TRIM44Q96DX7 344 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 APBB1O00213 710 aa12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 MARCH6O60337 910 aa12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 BRD4O60885 1362 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 ERC2O15083 957 aa12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 TOMM22Q9NS69 142 aa12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 ZNF652Q9Y2D9 606 aa12.01□□□□□ -0.49
TNFRSF9-204ENST00000615230 CPLX2Q6PUV4 134 aaKnown RBP12□□□□□ -0.49
TNFRSF9-204ENST00000615230 SLC26A8Q96RN1 970 aa12□□□□□ -0.49
TNFRSF9-204ENST00000615230 ATP10BO94823 1461 aa12□□□□□ -0.49
TNFRSF9-204ENST00000615230 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
TNFRSF9-204ENST00000615230 NEO1Q92859 1461 aa12□□□□□ -0.49
TNFRSF9-204ENST00000615230 TCERG1O14776 1098 aaKnown RBP11.99□□□□□ -0.49
TNFRSF9-204ENST00000615230 AMOTQ4VCS5 1084 aa11.99□□□□□ -0.49
TNFRSF9-204ENST00000615230 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
TNFRSF9-204ENST00000615230 GGNBP2Q9H3C7 697 aa11.99□□□□□ -0.49
TNFRSF9-204ENST00000615230 FKBP5Q13451 457 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF9-204ENST00000615230 NUTM2GQ5VZR2 741 aa11.99□□□□□ -0.49
TNFRSF9-204ENST00000615230 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
TNFRSF9-204ENST00000615230 PHF8Q9UPP1 1060 aa11.99□□□□□ -0.49
TNFRSF9-204ENST00000615230 ATP10AO60312 1499 aa11.99□□□□□ -0.49
TNFRSF9-204ENST00000615230 ERC1Q8IUD2 1116 aa11.98□□□□□ -0.49
TNFRSF9-204ENST00000615230 SHANK2Q9UPX8 1470 aa11.98□□□□□ -0.49
TNFRSF9-204ENST00000615230 ERICH2A1L162 156 aa11.98□□□□□ -0.49
TNFRSF9-204ENST00000615230 SYAP1Q96A49 352 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF9-204ENST00000615230 AMOTL2Q9Y2J4 779 aa11.98□□□□□ -0.49
TNFRSF9-204ENST00000615230 NSD2O96028 1365 aa11.98□□□□□ -0.49
TNFRSF9-204ENST00000615230 SLC3A2P08195 630 aaKnown RBP11.98□□□□□ -0.49
TNFRSF9-204ENST00000615230 STARD3NLO95772 234 aa11.97□□□□□ -0.49
TNFRSF9-204ENST00000615230 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF9-204ENST00000615230 DIAPH3Q9NSV4 1193 aa11.97□□□□□ -0.49
TNFRSF9-204ENST00000615230 CABP1Q9NZU7 370 aa11.97□□□□□ -0.49
TNFRSF9-204ENST00000615230 RNF20Q5VTR2 975 aa11.96□□□□□ -0.49
TNFRSF9-204ENST00000615230 TAOK2Q9UL54 1235 aa11.96□□□□□ -0.49
TNFRSF9-204ENST00000615230 ST18O60284 1047 aa11.96□□□□□ -0.49
TNFRSF9-204ENST00000615230 CEP170Q5SW79 1584 aa11.96□□□□□ -0.5
TNFRSF9-204ENST00000615230 GPATCH8Q9UKJ3 1502 aaKnown RBP11.96□□□□□ -0.5
TNFRSF9-204ENST00000615230 GNAI3P08754 354 aa11.96□□□□□ -0.5
TNFRSF9-204ENST00000615230 TRDNQ13061 729 aa11.96□□□□□ -0.5
TNFRSF9-204ENST00000615230 A0A087WZG4 1122 aa11.96□□□□□ -0.5
TNFRSF9-204ENST00000615230 TBC1D2BQ9UPU7 963 aa11.95□□□□□ -0.5
TNFRSF9-204ENST00000615230 VPS53Q5VIR6 699 aa11.95□□□□□ -0.5
TNFRSF9-204ENST00000615230 ZNF530Q6P9A1 599 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF9-204ENST00000615230 GBP4Q96PP9 640 aa11.95□□□□□ -0.5
TNFRSF9-204ENST00000615230 MTHFSP49914 203 aa11.95□□□□□ -0.5
TNFRSF9-204ENST00000615230 PRKRIP1Q9H875 184 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF9-204ENST00000615230 RASSF8Q8NHQ8 419 aa11.95□□□□□ -0.5
TNFRSF9-204ENST00000615230 NGLY1Q96IV0 654 aa11.95□□□□□ -0.5
TNFRSF9-204ENST00000615230 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
TNFRSF9-204ENST00000615230 NPHP3Q7Z494 1330 aa11.94□□□□□ -0.5
TNFRSF9-204ENST00000615230 TEX13AQ9BXU3 409 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF9-204ENST00000615230 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
TNFRSF9-204ENST00000615230 HIP1O00291 1037 aa11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 WDHD1O75717 1129 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 EIF2AK4Q9P2K8 1649 aaKnown RBP11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 RIMS2Q9UQ26 1411 aa11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 ZFYVE16Q7Z3T8 1539 aa11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 SYCP2Q9BX26 1530 aa11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 TTC21AQ8NDW8 1320 aa11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 NUP153P49790 1475 aaKnown RBP11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 UBTFL1P0CB47 393 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 TRIM29Q14134 588 aa11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 TMOD3Q9NYL9 352 aa11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 HSP90AB3PQ58FF7 597 aa11.93□□□□□ -0.5
TNFRSF9-204ENST00000615230 C11orf95C9JLR9 678 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 CCDC47Q96A33 483 aaKnown RBP11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 TTC21BQ7Z4L5 1316 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms