RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 MINK1Q8N4C8 1332 aaPredicted RBP25.6■■□□□ 1.69
MMP28-204ENST00000615136 CEBPAP49715 358 aaPredicted RBP25.59■■□□□ 1.69
MMP28-204ENST00000615136 ADAMTS8Q9UP79 889 aa25.58■■□□□ 1.69
MMP28-204ENST00000615136 UBR1Q8IWV7 1749 aa25.56■■□□□ 1.68
MMP28-204ENST00000615136 PUS7Q96PZ0 661 aaKnown RBP25.56■■□□□ 1.68
MMP28-204ENST00000615136 POGKQ9P215 609 aa25.56■■□□□ 1.68
MMP28-204ENST00000615136 RNF123Q5XPI4 1314 aa25.55■■□□□ 1.68
MMP28-204ENST00000615136 SRPK2P78362 688 aaKnown RBP25.53■■□□□ 1.68
MMP28-204ENST00000615136 INSRP06213 1382 aa25.53■■□□□ 1.68
MMP28-204ENST00000615136 PLEKHH1Q9ULM0 1364 aa25.53■■□□□ 1.68
MMP28-204ENST00000615136 METP08581 1390 aa25.53■■□□□ 1.68
MMP28-204ENST00000615136 WAPLQ7Z5K2 1190 aa25.53■■□□□ 1.68
MMP28-204ENST00000615136 ANKRD36BQ8N2N9 1353 aa25.52■■□□□ 1.68
MMP28-204ENST00000615136 USP32Q8NFA0 1604 aa25.51■■□□□ 1.67
MMP28-204ENST00000615136 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.5■■□□□ 1.67
MMP28-204ENST00000615136 C3P01024 1663 aa25.5■■□□□ 1.67
MMP28-204ENST00000615136 TMEM2Q9UHN6 1383 aa25.5■■□□□ 1.67
MMP28-204ENST00000615136 PLPPR3Q6T4P5 718 aa25.49■■□□□ 1.67
MMP28-204ENST00000615136 DLC1Q96QB1 1528 aa25.48■■□□□ 1.67
MMP28-204ENST00000615136 TNNT2P45379 298 aaPredicted RBP25.48■■□□□ 1.67
MMP28-204ENST00000615136 WDR43Q15061 677 aaKnown RBP eCLIP25.48■■□□□ 1.67
MMP28-204ENST00000615136 RBM19Q9Y4C8 960 aaKnown RBP25.48■■□□□ 1.67
MMP28-204ENST00000615136 A0A1W2PP64 1363 aa25.48■■□□□ 1.67
MMP28-204ENST00000615136 MORC1Q86VD1 984 aa25.47■■□□□ 1.67
MMP28-204ENST00000615136 CDCA7LQ96GN5 454 aa25.47■■□□□ 1.67
MMP28-204ENST00000615136 CDK19Q9BWU1 502 aa25.47■■□□□ 1.67
MMP28-204ENST00000615136 FER1L4A9Z1Z3 1794 aa25.46■■□□□ 1.67
MMP28-204ENST00000615136 ABCC11Q96J66 1382 aa25.46■■□□□ 1.67
MMP28-204ENST00000615136 CD163L1Q9NR16 1453 aa25.45■■□□□ 1.66
MMP28-204ENST00000615136 CGNL1Q0VF96 1302 aa25.45■■□□□ 1.66
MMP28-204ENST00000615136 MYT1Q01538 1121 aa25.44■■□□□ 1.66
MMP28-204ENST00000615136 LTKP29376 864 aa25.43■■□□□ 1.66
MMP28-204ENST00000615136 ATAD2Q6PL18 1390 aa25.43■■□□□ 1.66
MMP28-204ENST00000615136 TXNDC2Q86VQ3 553 aa25.42■■□□□ 1.66
MMP28-204ENST00000615136 NLRP1Q9C000 1473 aa25.42■■□□□ 1.66
MMP28-204ENST00000615136 NINLQ9Y2I6 1382 aa25.41■■□□□ 1.66
MMP28-204ENST00000615136 CCDC146Q8IYE0 955 aa25.41■■□□□ 1.66
MMP28-204ENST00000615136 ADAMTS13Q76LX8 1427 aa25.4■■□□□ 1.66
MMP28-204ENST00000615136 HDGFP51858 240 aaKnown RBP25.39■■□□□ 1.66
MMP28-204ENST00000615136 POLR3AO14802 1390 aaPredicted RBP25.39■■□□□ 1.65
MMP28-204ENST00000615136 PDE3BQ13370 1112 aa25.38■■□□□ 1.65
MMP28-204ENST00000615136 CABP1Q9NZU7 370 aa25.37■■□□□ 1.65
MMP28-204ENST00000615136 SHPRHQ149N8 1683 aa25.37■■□□□ 1.65
MMP28-204ENST00000615136 B4GALNT3Q6L9W6 998 aa25.37■■□□□ 1.65
MMP28-204ENST00000615136 KNDC1Q76NI1 1749 aa25.36■■□□□ 1.65
MMP28-204ENST00000615136 TECPR2O15040 1411 aa25.35■■□□□ 1.65
MMP28-204ENST00000615136 MTHFSP49914 203 aa25.34■■□□□ 1.65
MMP28-204ENST00000615136 GGNBP2Q9H3C7 697 aa25.34■■□□□ 1.65
MMP28-204ENST00000615136 NSD2O96028 1365 aa25.34■■□□□ 1.65
MMP28-204ENST00000615136 TERF2IPQ9NYB0 399 aa25.34■■□□□ 1.65
MMP28-204ENST00000615136 PLEKHG1Q9ULL1 1385 aa25.33■■□□□ 1.64
MMP28-204ENST00000615136 CPS1P31327 1500 aa25.33■■□□□ 1.64
MMP28-204ENST00000615136 ROBO2Q9HCK4 1378 aa25.32■■□□□ 1.64
MMP28-204ENST00000615136 ZNF521Q96K83 1311 aa25.31■■□□□ 1.64
MMP28-204ENST00000615136 FYB1O15117 783 aa25.31■■□□□ 1.64
MMP28-204ENST00000615136 WASLO00401 505 aaPredicted RBP25.3■■□□□ 1.64
MMP28-204ENST00000615136 FAM135BQ49AJ0 1406 aa25.3■■□□□ 1.64
MMP28-204ENST00000615136 APAF1O14727 1248 aa25.3■■□□□ 1.64
MMP28-204ENST00000615136 SLC26A8Q96RN1 970 aa25.3■■□□□ 1.64
MMP28-204ENST00000615136 ARHGAP23Q9P227 1491 aa25.29■■□□□ 1.64
MMP28-204ENST00000615136 NCKAP5LQ9HCH0 1330 aa25.29■■□□□ 1.64
MMP28-204ENST00000615136 SLIT1O75093 1534 aa25.29■■□□□ 1.64
MMP28-204ENST00000615136 MED14O60244 1454 aa25.28■■□□□ 1.64
MMP28-204ENST00000615136 HDGFL2Q7Z4V5 671 aaPredicted RBP25.28■■□□□ 1.64
MMP28-204ENST00000615136 RCAN3Q9UKA8 241 aa25.28■■□□□ 1.64
MMP28-204ENST00000615136 ANKRD26Q9UPS8 1709 aa25.27■■□□□ 1.64
MMP28-204ENST00000615136 SIRT1Q96EB6 747 aa25.27■■□□□ 1.64
MMP28-204ENST00000615136 PTPRUQ92729 1446 aa25.27■■□□□ 1.64
MMP28-204ENST00000615136 ATP7BP35670 1465 aa25.24■■□□□ 1.63
MMP28-204ENST00000615136 EID1Q9Y6B2 187 aa25.24■■□□□ 1.63
MMP28-204ENST00000615136 RIMS1Q86UR5 1692 aaKnown RBP25.24■■□□□ 1.63
MMP28-204ENST00000615136 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.24■■□□□ 1.63
MMP28-204ENST00000615136 PPIP5K1Q6PFW1 1433 aa25.23■■□□□ 1.63
MMP28-204ENST00000615136 KIF20BQ96Q89 1820 aa25.23■■□□□ 1.63
MMP28-204ENST00000615136 RRP1P56182 461 aaKnown RBP25.23■■□□□ 1.63
MMP28-204ENST00000615136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.22■■□□□ 1.63
MMP28-204ENST00000615136 NUDT16Q96DE0 195 aaKnown RBP25.22■■□□□ 1.63
MMP28-204ENST00000615136 FANCIQ9NVI1 1328 aa25.22■■□□□ 1.63
MMP28-204ENST00000615136 DUSP27Q5VZP5 1158 aa25.21■■□□□ 1.63
MMP28-204ENST00000615136 SPINK5Q9NQ38 1064 aaPredicted RBP25.21■■□□□ 1.63
MMP28-204ENST00000615136 PRR36Q9H6K5 1346 aa25.21■■□□□ 1.63
MMP28-204ENST00000615136 DMRT2Q9Y5R5 561 aa25.2■■□□□ 1.63
MMP28-204ENST00000615136 CPSF1Q10570 1443 aaKnown RBP25.2■■□□□ 1.62
MMP28-204ENST00000615136 GOLGA2Q08379 1002 aa25.2■■□□□ 1.62
MMP28-204ENST00000615136 THEMISQ8N1K5 641 aaPredicted RBP25.2■■□□□ 1.62
MMP28-204ENST00000615136 CFAP53Q96M91 514 aa25.19■■□□□ 1.62
MMP28-204ENST00000615136 FBLN1P23142 703 aa25.18■■□□□ 1.62
MMP28-204ENST00000615136 CCDC136Q96JN2 1154 aa25.18■■□□□ 1.62
MMP28-204ENST00000615136 COL3A1P02461 1466 aaPredicted RBP25.17■■□□□ 1.62
MMP28-204ENST00000615136 SLFN5Q08AF3 891 aa25.17■■□□□ 1.62
MMP28-204ENST00000615136 ANP32EQ9BTT0 268 aa25.17■■□□□ 1.62
MMP28-204ENST00000615136 CEP170BQ9Y4F5 1589 aaPredicted RBP25.16■■□□□ 1.62
MMP28-204ENST00000615136 AMOTL2Q9Y2J4 779 aa25.15■■□□□ 1.62
MMP28-204ENST00000615136 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
MMP28-204ENST00000615136 CDC42BPGQ6DT37 1551 aa25.15■■□□□ 1.62
MMP28-204ENST00000615136 RRP7AQ9Y3A4 280 aaKnown RBP25.15■■□□□ 1.62
MMP28-204ENST00000615136 CCDC61Q9Y6R9 512 aa25.15■■□□□ 1.62
MMP28-204ENST00000615136 ADGRB2O60241 1585 aa25.14■■□□□ 1.62
MMP28-204ENST00000615136 TBX22Q9Y458 520 aa25.14■■□□□ 1.62
MMP28-204ENST00000615136 PLIN1O60240 522 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms