RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 RXRBP28702 533 aa10.78□□□□□ -0.68
TARDBP-216ENST00000614494 PNPLA6Q8IY17 1366 aa10.77□□□□□ -0.68
TARDBP-216ENST00000614494 NPHP3Q7Z494 1330 aa10.77□□□□□ -0.69
TARDBP-216ENST00000614494 PPARGC1BQ86YN6 1023 aaKnown RBP10.76□□□□□ -0.69
TARDBP-216ENST00000614494 NGLY1Q96IV0 654 aa10.76□□□□□ -0.69
TARDBP-216ENST00000614494 SOS2Q07890 1332 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-216ENST00000614494 ROBO2Q9HCK4 1378 aa10.76□□□□□ -0.69
TARDBP-216ENST00000614494 SPATA31E1Q6ZUB1 1445 aa10.75□□□□□ -0.69
TARDBP-216ENST00000614494 RBM6P78332 1123 aaKnown RBP10.74□□□□□ -0.69
TARDBP-216ENST00000614494 KNDC1Q76NI1 1749 aa10.74□□□□□ -0.69
TARDBP-216ENST00000614494 AFF2P51816 1311 aa10.74□□□□□ -0.69
TARDBP-216ENST00000614494 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
TARDBP-216ENST00000614494 PIK3C2GO75747 1445 aa10.74□□□□□ -0.69
TARDBP-216ENST00000614494 COL22A1Q8NFW1 1626 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-216ENST00000614494 NUTM2BA6NNL0 878 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-216ENST00000614494 NUTM2EB1AL46 878 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-216ENST00000614494 NUTM2AQ8IVF1 878 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-216ENST00000614494 SIRT1Q96EB6 747 aa10.73□□□□□ -0.69
TARDBP-216ENST00000614494 STAC3Q96MF2 364 aa10.73□□□□□ -0.69
TARDBP-216ENST00000614494 MYOM2P54296 1465 aa10.73□□□□□ -0.69
TARDBP-216ENST00000614494 MPHOSPH9Q99550 1183 aa10.72□□□□□ -0.69
TARDBP-216ENST00000614494 KIF1AQ12756 1690 aa10.72□□□□□ -0.69
TARDBP-216ENST00000614494 IFT172Q9UG01 1749 aa10.72□□□□□ -0.69
TARDBP-216ENST00000614494 C8orf37Q96NL8 207 aa10.71□□□□□ -0.69
TARDBP-216ENST00000614494 EIF3AQ14152 1382 aaKnown RBP10.7□□□□□ -0.7
TARDBP-216ENST00000614494 TRPC5Q9UL62 973 aaPredicted RBP10.7□□□□□ -0.7
TARDBP-216ENST00000614494 NRXN1Q9ULB1 1477 aa10.69□□□□□ -0.7
TARDBP-216ENST00000614494 DHX57Q6P158 1386 aaKnown RBP10.69□□□□□ -0.7
TARDBP-216ENST00000614494 ATAD2Q6PL18 1390 aa10.69□□□□□ -0.7
TARDBP-216ENST00000614494 ESCO1Q5FWF5 840 aa10.69□□□□□ -0.7
TARDBP-216ENST00000614494 PXDNQ92626 1479 aa10.68□□□□□ -0.7
TARDBP-216ENST00000614494 YTHDC2Q9H6S0 1430 aaKnown RBP10.68□□□□□ -0.7
TARDBP-216ENST00000614494 FNBP4Q8N3X1 1017 aaPredicted RBP10.68□□□□□ -0.7
TARDBP-216ENST00000614494 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.72e-11■■■□□ 15.1
TARDBP-216ENST00000614494 ORAI2Q96SN7 254 aa10.68□□□□□ -0.7
TARDBP-216ENST00000614494 QTRT2Q9H974 415 aaKnown RBP10.68□□□□□ -0.7
TARDBP-216ENST00000614494 ADGRF5Q8IZF2 1346 aa10.67□□□□□ -0.7
TARDBP-216ENST00000614494 USP21Q9UK80 565 aa10.67□□□□□ -0.7
TARDBP-216ENST00000614494 DLC1Q96QB1 1528 aa10.67□□□□□ -0.7
TARDBP-216ENST00000614494 RGS12O14924 1447 aa10.67□□□□□ -0.7
TARDBP-216ENST00000614494 ANKARQ7Z5J8 1434 aa10.67□□□□□ -0.7
TARDBP-216ENST00000614494 HRCP23327 699 aa10.66□□□□□ -0.7
TARDBP-216ENST00000614494 PSME1Q06323 249 aa10.66□□□□□ -0.7
TARDBP-216ENST00000614494 RGL3Q3MIN7 710 aa10.66□□□□□ -0.7
TARDBP-216ENST00000614494 CCDC125Q86Z20 511 aa10.66□□□□□ -0.7
TARDBP-216ENST00000614494 C14orf93Q9H972 538 aaKnown RBP10.66□□□□□ -0.7
TARDBP-216ENST00000614494 FMN2Q9NZ56 1722 aa10.66□□□□□ -0.7
TARDBP-216ENST00000614494 ARHGEF10O15013 1369 aa10.65□□□□□ -0.7
TARDBP-216ENST00000614494 ADAMTS2O95450 1211 aa10.65□□□□□ -0.7
TARDBP-216ENST00000614494 ATRNO75882 1429 aa10.65□□□□□ -0.7
TARDBP-216ENST00000614494 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.64□□□□□ -0.71
TARDBP-216ENST00000614494 ADGRB2O60241 1585 aa10.64□□□□□ -0.71
TARDBP-216ENST00000614494 FOXO3O43524 673 aa10.63□□□□□ -0.71
TARDBP-216ENST00000614494 NCBP3Q53F19 620 aaKnown RBP10.63□□□□□ -0.71
TARDBP-216ENST00000614494 DDX17Q92841 729 aaKnown RBP10.63□□□□□ -0.71
TARDBP-216ENST00000614494 STK26Q9P289 416 aa10.63□□□□□ -0.71
TARDBP-216ENST00000614494 TNS3Q68CZ2 1445 aa10.63□□□□□ -0.71
TARDBP-216ENST00000614494 SBNO1A3KN83 1393 aa10.63□□□□□ -0.71
TARDBP-216ENST00000614494 SPATA31A3Q5VYP0 1347 aa10.62□□□□□ -0.71
TARDBP-216ENST00000614494 MARF1Q9Y4F3 1742 aaKnown RBP10.62□□□□□ -0.71
TARDBP-216ENST00000614494 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
TARDBP-216ENST00000614494 WAPLQ7Z5K2 1190 aa10.61□□□□□ -0.71
TARDBP-216ENST00000614494 PHF8Q9UPP1 1060 aa10.61□□□□□ -0.71
TARDBP-216ENST00000614494 USP32Q8NFA0 1604 aa10.61□□□□□ -0.71
TARDBP-216ENST00000614494 RAB3GAP2Q9H2M9 1393 aa10.61□□□□□ -0.71
TARDBP-216ENST00000614494 POGKQ9P215 609 aa10.6□□□□□ -0.71
TARDBP-216ENST00000614494 GPRASP1Q5JY77 1395 aa10.6□□□□□ -0.71
TARDBP-216ENST00000614494 BCL9LQ86UU0 1499 aa10.6□□□□□ -0.71
TARDBP-216ENST00000614494 SLIT2O94813 1529 aa10.59□□□□□ -0.71
TARDBP-216ENST00000614494 TMEM132EQ6IEE7 984 aa10.59□□□□□ -0.71
TARDBP-216ENST00000614494 KRT28Q7Z3Y7 464 aa10.59□□□□□ -0.71
TARDBP-216ENST00000614494 UNC5CLQ8IV45 518 aa10.59□□□□□ -0.71
TARDBP-216ENST00000614494 GJD4Q96KN9 370 aaPredicted RBP10.59□□□□□ -0.71
TARDBP-216ENST00000614494 PLEKHH1Q9ULM0 1364 aa10.59□□□□□ -0.71
TARDBP-216ENST00000614494 NWD2Q9ULI1 1742 aa10.58□□□□□ -0.72
TARDBP-216ENST00000614494 ADGRB1O14514 1584 aa10.58□□□□□ -0.72
TARDBP-216ENST00000614494 PRAM1Q96QH2 718 aa10.58□□□□□ -0.72
TARDBP-216ENST00000614494 TULP4Q9NRJ4 1543 aa10.58□□□□□ -0.72
TARDBP-216ENST00000614494 CFAP70Q5T0N1 1121 aa10.57□□□□□ -0.72
TARDBP-216ENST00000614494 BLMP54132 1417 aaPredicted RBP10.56□□□□□ -0.72
TARDBP-216ENST00000614494 RALGAPBQ86X10 1494 aa10.55□□□□□ -0.72
TARDBP-216ENST00000614494 NUTM2FA1L443 756 aa10.55□□□□□ -0.72
TARDBP-216ENST00000614494 XPCQ01831 940 aaPredicted RBP10.55□□□□□ -0.72
TARDBP-216ENST00000614494 VPS72Q15906 364 aa10.55□□□□□ -0.72
TARDBP-216ENST00000614494 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
TARDBP-216ENST00000614494 SF3B2Q13435 895 aaKnown RBP10.54□□□□□ -0.72
TARDBP-216ENST00000614494 ITSN1Q15811 1721 aa10.54□□□□□ -0.72
TARDBP-216ENST00000614494 ATP7BP35670 1465 aa10.54□□□□□ -0.72
TARDBP-216ENST00000614494 WASLO00401 505 aaPredicted RBP10.53□□□□□ -0.72
TARDBP-216ENST00000614494 DCAF11Q8TEB1 546 aa10.53□□□□□ -0.72
TARDBP-216ENST00000614494 KIAA1210Q9ULL0 1709 aa10.53□□□□□ -0.72
TARDBP-216ENST00000614494 ONECUT3O60422 494 aaPredicted RBP10.52□□□□□ -0.73
TARDBP-216ENST00000614494 PLCH1Q4KWH8 1693 aa10.52□□□□□ -0.73
TARDBP-216ENST00000614494 ABCA3Q99758 1704 aa10.52□□□□□ -0.73
TARDBP-216ENST00000614494 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.73
TARDBP-216ENST00000614494 GLI3P10071 1580 aa10.52□□□□□ -0.73
TARDBP-216ENST00000614494 BRD4O60885 1362 aaPredicted RBP10.52□□□□□ -0.73
TARDBP-216ENST00000614494 LMOD2Q6P5Q4 547 aa10.51□□□□□ -0.73
TARDBP-216ENST00000614494 TRAK1Q9UPV9 953 aa10.51□□□□□ -0.73
TARDBP-216ENST00000614494 SAFB2Q14151 953 aaKnown RBP eCLIP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms