RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 HLTFQ14527 1009 aaKnown RBP eCLIP2.4□□□□□ -2.026e-6■■■□□ 17.2
BRCA2-207ENST00000614259 SREK1Q8WXA9 508 aaKnown RBP2.4□□□□□ -2.02
BRCA2-207ENST00000614259 UBXN4Q92575 508 aa2.4□□□□□ -2.02
BRCA2-207ENST00000614259 MKL1Q969V6 931 aa2.4□□□□□ -2.02
BRCA2-207ENST00000614259 KDM4FA0A1W2PPD8 638 aa2.4□□□□□ -2.02
BRCA2-207ENST00000614259 STAG2Q8N3U4 1231 aa2.4□□□□□ -2.02
BRCA2-207ENST00000614259 ATP9BO43861 1147 aa2.4□□□□□ -2.03
BRCA2-207ENST00000614259 SPIRE2Q8WWL2 714 aa2.4□□□□□ -2.03
BRCA2-207ENST00000614259 BCL2L12Q9HB09 334 aa2.4□□□□□ -2.03
BRCA2-207ENST00000614259 SEMA3FQ13275 785 aa2.4□□□□□ -2.03
BRCA2-207ENST00000614259 LARP1Q6PKG0 1096 aaKnown RBP2.4□□□□□ -2.03
BRCA2-207ENST00000614259 NYAP1Q6ZVC0 841 aa2.4□□□□□ -2.03
BRCA2-207ENST00000614259 MS4A1P11836 297 aa2.4□□□□□ -2.03
BRCA2-207ENST00000614259 CD44P16070 742 aaKnown RBP2.4□□□□□ -2.03
BRCA2-207ENST00000614259 TAF7LQ5H9L4 462 aa2.4□□□□□ -2.03
BRCA2-207ENST00000614259 TAS1R3Q7RTX0 852 aa2.4□□□□□ -2.03
BRCA2-207ENST00000614259 MARSP56192 900 aaKnown RBP2.39□□□□□ -2.03
BRCA2-207ENST00000614259 KMT5BQ4FZB7 885 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 SEPT12Q8IYM1 358 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 ANKRD13AQ8IZ07 590 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 LARGE2Q8N3Y3 721 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 POTEB3A0JP26 581 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 NPR3P17342 541 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 POTEBQ6S5H4 581 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 RBM19Q9Y4C8 960 aaKnown RBP2.39□□□□□ -2.03
BRCA2-207ENST00000614259 C2orf72A6NCS6 295 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 C6orf132Q5T0Z8 1188 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 ZNF777Q9ULD5 760 aaPredicted RBP2.39□□□□□ -2.03
BRCA2-207ENST00000614259 GCGRP47871 477 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 GNL2Q13823 731 aaKnown RBP2.39□□□□□ -2.03
BRCA2-207ENST00000614259 DIEXFQ68CQ4 756 aaKnown RBP2.39□□□□□ -2.03
BRCA2-207ENST00000614259 PDXDC2PQ6P474 469 aa2.39□□□□□ -2.03
BRCA2-207ENST00000614259 GPC6Q9Y625 555 aaPredicted RBP2.39□□□□□ -2.03
BRCA2-207ENST00000614259 GRXCR2A6NFK2 248 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 EYA1Q99502 592 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 FAM13BQ9NYF5 915 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 PPP4R3BQ5MIZ7 849 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 PDCD7Q8N8D1 485 aaKnown RBP2.38□□□□□ -2.03
BRCA2-207ENST00000614259 METTL14Q9HCE5 456 aaKnown RBP2.38□□□□□ -2.03
BRCA2-207ENST00000614259 ERBB3P21860 1342 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 MDM2Q00987 491 aaPredicted RBP2.38□□□□□ -2.03
BRCA2-207ENST00000614259 PTK2Q05397 1052 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 FBF1Q8TES7 1133 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 POTECB2RU33 542 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 SCARA3Q6AZY7 606 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 TMEM134Q9H6X4 195 aa2.38□□□□□ -2.03
BRCA2-207ENST00000614259 BMP2KQ9NSY1 1161 aaPredicted RBP2.38□□□□□ -2.03
BRCA2-207ENST00000614259 ZBBXA8MT70 800 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 CDK11BP21127 795 aaKnown RBP2.37□□□□□ -2.03
BRCA2-207ENST00000614259 CHRDL2Q6WN34 429 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 RETREG3Q86VR2 466 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 VPS37DQ86XT2 251 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 MPNDQ8N594 471 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 ZCRB1Q8TBF4 217 aaKnown RBP2.37□□□□□ -2.03
BRCA2-207ENST00000614259 GLMNQ92990 594 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 CLUAP1Q96AJ1 413 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 GMLQ99445 158 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 RBCK1Q9BYM8 510 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 MAGEC2Q9UBF1 373 aaPredicted RBP2.37□□□□□ -2.03
BRCA2-207ENST00000614259 HIF1AQ16665 826 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 HDGFL1Q5TGJ6 251 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.37□□□□□ -2.03
BRCA2-207ENST00000614259 MTMR2Q13614 643 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 PALM3A6NDB9 673 aaPredicted RBP2.37□□□□□ -2.03
BRCA2-207ENST00000614259 MTMR14Q8NCE2 650 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 TK2O00142 265 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 WASLO00401 505 aaPredicted RBP2.37□□□□□ -2.03
BRCA2-207ENST00000614259 CFAP70Q5T0N1 1121 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 NBPF14Q5TI25 921 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 SYNPOQ8N3V7 929 aa2.37□□□□□ -2.03
BRCA2-207ENST00000614259 AEBP1Q8IUX7 1158 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 DMRTB1Q96MA1 342 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 HIRIP3Q9BW71 556 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-207ENST00000614259 FDX1P10109 184 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 COL9A2Q14055 689 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-207ENST00000614259 TYW1Q9NV66 732 aaKnown RBP2.36□□□□□ -2.03
BRCA2-207ENST00000614259 FOXO3O43524 673 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 RLBP1P12271 317 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 PDE3BQ13370 1112 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 ASB16Q96NS5 453 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 FAM13AO94988 1023 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 MAP3K7O43318 606 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 POLD1P28340 1107 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 EFCC1Q9HA90 598 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 MAFBQ9Y5Q3 323 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-207ENST00000614259 PIP4P2Q8N4L2 257 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 PCDH10Q9P2E7 1040 aa2.36□□□□□ -2.03
BRCA2-207ENST00000614259 TMEM88BA6NKF7 163 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 BACH1O14867 736 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 C3orf67Q6ZVT6 689 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 FAM200AQ8TCP9 573 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 STRIP2Q9ULQ0 834 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 PCDHGA4Q9Y5G9 962 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 PCDHGA10Q9Y5H3 936 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 USP5P45974 858 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 LYPD8Q6UX82 237 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 ALKBH8Q96BT7 664 aaKnown RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 USP17L8P0C7I0 530 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 PTPREP23469 700 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 SSFA2P28290 1259 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms