RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 TRIM44Q96DX7 344 aaPredicted RBP20.93■□□□□ 0.94
TSKU-205ENST00000612930 JPH4Q96JJ6 628 aa20.93■□□□□ 0.94
TSKU-205ENST00000612930 CARD14Q9BXL6 1004 aa20.93■□□□□ 0.94
TSKU-205ENST00000612930 RRP7AQ9Y3A4 280 aaKnown RBP20.93■□□□□ 0.94
TSKU-205ENST00000612930 CEP152O94986 1710 aa20.93■□□□□ 0.94
TSKU-205ENST00000612930 SYCP2Q9BX26 1530 aa20.93■□□□□ 0.94
TSKU-205ENST00000612930 TPM2P07951 284 aa20.92■□□□□ 0.94
TSKU-205ENST00000612930 POLR3AO14802 1390 aaPredicted RBP20.92■□□□□ 0.94
TSKU-205ENST00000612930 TNPO1Q92973 898 aaKnown RBP20.91■□□□□ 0.94
TSKU-205ENST00000612930 SHPRHQ149N8 1683 aa20.9■□□□□ 0.94
TSKU-205ENST00000612930 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
TSKU-205ENST00000612930 MVPQ14764 893 aaKnown RBP20.9■□□□□ 0.94
TSKU-205ENST00000612930 SPHKAPQ2M3C7 1700 aa20.89■□□□□ 0.93
TSKU-205ENST00000612930 IQSEC2Q5JU85 1478 aa20.88■□□□□ 0.93
TSKU-205ENST00000612930 TCP11L2Q8N4U5 519 aa20.88■□□□□ 0.93
TSKU-205ENST00000612930 CHMP7Q8WUX9 453 aaPredicted RBP20.88■□□□□ 0.93
TSKU-205ENST00000612930 PDCL3Q9H2J4 239 aa20.88■□□□□ 0.93
TSKU-205ENST00000612930 DUOX2Q9NRD8 1548 aa20.87■□□□□ 0.93
TSKU-205ENST00000612930 RUNDC1Q96C34 613 aa20.87■□□□□ 0.93
TSKU-205ENST00000612930 TTC37Q6PGP7 1564 aa20.87■□□□□ 0.93
TSKU-205ENST00000612930 WDR63Q8IWG1 891 aa20.86■□□□□ 0.93
TSKU-205ENST00000612930 SMC5Q8IY18 1101 aa20.86■□□□□ 0.93
TSKU-205ENST00000612930 KIAA1211Q6ZU35 1233 aa20.85■□□□□ 0.93
TSKU-205ENST00000612930 SNX21Q969T3 373 aa20.85■□□□□ 0.93
TSKU-205ENST00000612930 ERVK-7P63135 1459 aa20.85■□□□□ 0.93
TSKU-205ENST00000612930 RBM25P49756 843 aaKnown RBP20.84■□□□□ 0.93
TSKU-205ENST00000612930 RAB3GAP1Q15042 981 aa20.84■□□□□ 0.93
TSKU-205ENST00000612930 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
TSKU-205ENST00000612930 CIZ1Q9ULV3 898 aaPredicted RBP20.83■□□□□ 0.92
TSKU-205ENST00000612930 GBP4Q96PP9 640 aa20.82■□□□□ 0.92
TSKU-205ENST00000612930 SKOR2Q2VWA4 1001 aaPredicted RBP20.82■□□□□ 0.92
TSKU-205ENST00000612930 DZIP1LQ8IYY4 767 aaKnown RBP20.82■□□□□ 0.92
TSKU-205ENST00000612930 KANK1Q14678 1352 aa20.82■□□□□ 0.92
TSKU-205ENST00000612930 HDAC1Q13547 482 aaPredicted RBP20.81■□□□□ 0.92
TSKU-205ENST00000612930 ZKSCAN2Q63HK3 967 aa20.81■□□□□ 0.92
TSKU-205ENST00000612930 PPP1R9BQ96SB3 815 aa20.81■□□□□ 0.92
TSKU-205ENST00000612930 FBLN2P98095 1184 aa20.8■□□□□ 0.92
TSKU-205ENST00000612930 CCDC173Q0VFZ6 552 aa20.8■□□□□ 0.92
TSKU-205ENST00000612930 ARHGAP5Q13017 1502 aa20.8■□□□□ 0.92
TSKU-205ENST00000612930 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
TSKU-205ENST00000612930 CCDC27Q2M243 656 aa20.79■□□□□ 0.92
TSKU-205ENST00000612930 OFD1O75665 1012 aa20.78■□□□□ 0.92
TSKU-205ENST00000612930 HSP90AB1P08238 724 aaKnown RBP20.78■□□□□ 0.92
TSKU-205ENST00000612930 ZSCAN30Q86W11 494 aa20.78■□□□□ 0.92
TSKU-205ENST00000612930 STAC3Q96MF2 364 aa20.78■□□□□ 0.92
TSKU-205ENST00000612930 TRPM2O94759 1503 aa20.77■□□□□ 0.92
TSKU-205ENST00000612930 TNNT2P45379 298 aaPredicted RBP20.77■□□□□ 0.92
TSKU-205ENST00000612930 CLTCL1P53675 1640 aa20.76■□□□□ 0.91
TSKU-205ENST00000612930 KIAA1210Q9ULL0 1709 aa20.76■□□□□ 0.91
TSKU-205ENST00000612930 NASPP49321 788 aaPredicted RBP20.76■□□□□ 0.91
TSKU-205ENST00000612930 RIPK4P57078 832 aa20.76■□□□□ 0.91
TSKU-205ENST00000612930 KIF2CQ99661 725 aa20.76■□□□□ 0.91
TSKU-205ENST00000612930 PTMSP20962 102 aa20.75■□□□□ 0.91
TSKU-205ENST00000612930 MORC1Q86VD1 984 aa20.75■□□□□ 0.91
TSKU-205ENST00000612930 CD2BP2O95400 341 aaKnown RBP20.75■□□□□ 0.91
TSKU-205ENST00000612930 TRIM27P14373 513 aa20.75■□□□□ 0.91
TSKU-205ENST00000612930 FOXD4L1Q9NU39 408 aa20.74■□□□□ 0.91
TSKU-205ENST00000612930 CFAP70Q5T0N1 1121 aa20.73■□□□□ 0.91
TSKU-205ENST00000612930 CALD1Q05682 793 aaKnown RBP20.72■□□□□ 0.91
TSKU-205ENST00000612930 ITPRIPQ8IWB1 547 aa20.72■□□□□ 0.91
TSKU-205ENST00000612930 DDX19BQ9UMR2 479 aa20.72■□□□□ 0.91
TSKU-205ENST00000612930 NSD3Q9BZ95 1437 aa20.72■□□□□ 0.91
TSKU-205ENST00000612930 ERCC6Q03468 1493 aa20.72■□□□□ 0.91
TSKU-205ENST00000612930 SLC24A1O60721 1099 aa20.71■□□□□ 0.91
TSKU-205ENST00000612930 SSFA2P28290 1259 aa20.71■□□□□ 0.91
TSKU-205ENST00000612930 RBM10P98175 930 aaKnown RBP20.71■□□□□ 0.91
TSKU-205ENST00000612930 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.71■□□□□ 0.91
TSKU-205ENST00000612930 PTPRTO14522 1441 aa20.71■□□□□ 0.91
TSKU-205ENST00000612930 TSR2Q969E8 191 aaKnown RBP20.71■□□□□ 0.91
TSKU-205ENST00000612930 TERF1P54274 439 aa20.71■□□□□ 0.91
TSKU-205ENST00000612930 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.71■□□□□ 0.91
TSKU-205ENST00000612930 SMC4Q9NTJ3 1288 aa20.71■□□□□ 0.91
TSKU-205ENST00000612930 ZNF518AQ6AHZ1 1483 aa20.7■□□□□ 0.9
TSKU-205ENST00000612930 IBTKQ9P2D0 1353 aaPredicted RBP20.7■□□□□ 0.9
TSKU-205ENST00000612930 NUCB1Q02818 461 aa20.7■□□□□ 0.9
TSKU-205ENST00000612930 MSNP26038 577 aaKnown RBP20.69■□□□□ 0.9
TSKU-205ENST00000612930 MTHFSP49914 203 aa20.69■□□□□ 0.9
TSKU-205ENST00000612930 SSH1Q8WYL5 1049 aa20.69■□□□□ 0.9
TSKU-205ENST00000612930 PRDM4Q9UKN5 801 aa20.69■□□□□ 0.9
TSKU-205ENST00000612930 K7ELQ4 463 aaPredicted RBP20.68■□□□□ 0.9
TSKU-205ENST00000612930 KLHL40Q2TBA0 621 aa20.68■□□□□ 0.9
TSKU-205ENST00000612930 CLEC17AQ6ZS10 378 aa20.68■□□□□ 0.9
TSKU-205ENST00000612930 LNPKQ9C0E8 428 aa20.68■□□□□ 0.9
TSKU-205ENST00000612930 CT47B1P0C2W7 299 aaPredicted RBP20.68■□□□□ 0.9
TSKU-205ENST00000612930 EXOSC9Q06265 439 aaKnown RBP20.68■□□□□ 0.9
TSKU-205ENST00000612930 ATF7IPQ6VMQ6 1270 aa20.68■□□□□ 0.9
TSKU-205ENST00000612930 ZBTB40Q9NUA8 1239 aa20.68■□□□□ 0.9
TSKU-205ENST00000612930 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
TSKU-205ENST00000612930 NCBP3Q53F19 620 aaKnown RBP20.67■□□□□ 0.9
TSKU-205ENST00000612930 TMEM57Q8N5G2 664 aa20.67■□□□□ 0.9
TSKU-205ENST00000612930 GAS2L2Q8NHY3 880 aa20.67■□□□□ 0.9
TSKU-205ENST00000612930 RBM42Q9BTD8 480 aaKnown RBP20.67■□□□□ 0.9
TSKU-205ENST00000612930 DDX49Q9Y6V7 483 aaKnown RBP20.67■□□□□ 0.9
TSKU-205ENST00000612930 ANP32BQ92688 251 aaKnown RBP20.66■□□□□ 0.9
TSKU-205ENST00000612930 BAG4O95429 457 aaKnown RBP20.65■□□□□ 0.9
TSKU-205ENST00000612930 NOB1Q9ULX3 412 aaKnown RBP20.65■□□□□ 0.9
TSKU-205ENST00000612930 ADGRB2O60241 1585 aa20.65■□□□□ 0.9
TSKU-205ENST00000612930 R3HCC1Q9Y3T6 440 aaKnown RBP20.65■□□□□ 0.9
TSKU-205ENST00000612930 MAP3K4Q9Y6R4 1608 aa20.65■□□□□ 0.9
TSKU-205ENST00000612930 ADGRF5Q8IZF2 1346 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms