RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 QRICH2Q9H0J4 1663 aa18■□□□□ 0.47
PRKN-210ENST00000612540 PTPRUQ92729 1446 aa18■□□□□ 0.47
PRKN-210ENST00000612540 ST20-MTHFSA0A0A6YYL1 179 aa18■□□□□ 0.47
PRKN-210ENST00000612540 XRN1Q8IZH2 1706 aaKnown RBP18■□□□□ 0.47
PRKN-210ENST00000612540 DLC1Q96QB1 1528 aa17.99■□□□□ 0.47
PRKN-210ENST00000612540 CENPJQ9HC77 1338 aaPredicted RBP17.98■□□□□ 0.47
PRKN-210ENST00000612540 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
PRKN-210ENST00000612540 POGKQ9P215 609 aa17.98■□□□□ 0.47
PRKN-210ENST00000612540 AMOTL2Q9Y2J4 779 aa17.98■□□□□ 0.47
PRKN-210ENST00000612540 ABCC11Q96J66 1382 aa17.98■□□□□ 0.47
PRKN-210ENST00000612540 MSH6P52701 1360 aa17.97■□□□□ 0.47
PRKN-210ENST00000612540 TECPR2O15040 1411 aa17.97■□□□□ 0.47
PRKN-210ENST00000612540 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
PRKN-210ENST00000612540 PRAM1Q96QH2 718 aa17.96■□□□□ 0.47
PRKN-210ENST00000612540 RGS17Q9UGC6 210 aaPredicted RBP17.95■□□□□ 0.46
PRKN-210ENST00000612540 ROBO2Q9HCK4 1378 aa17.94■□□□□ 0.46
PRKN-210ENST00000612540 PTCH1Q13635 1447 aa17.94■□□□□ 0.46
PRKN-210ENST00000612540 NCOA3Q9Y6Q9 1424 aa17.94■□□□□ 0.46
PRKN-210ENST00000612540 WAPLQ7Z5K2 1190 aa17.93■□□□□ 0.46
PRKN-210ENST00000612540 SLAIN2Q9P270 581 aa17.93■□□□□ 0.46
PRKN-210ENST00000612540 PLEKHH1Q9ULM0 1364 aa17.92■□□□□ 0.46
PRKN-210ENST00000612540 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
PRKN-210ENST00000612540 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
PRKN-210ENST00000612540 POLR3GLQ9BT43 218 aa17.91■□□□□ 0.46
PRKN-210ENST00000612540 TESK2Q96S53 571 aa17.9■□□□□ 0.46
PRKN-210ENST00000612540 TMF1P82094 1093 aa17.89■□□□□ 0.45
PRKN-210ENST00000612540 SIRT1Q96EB6 747 aa17.89■□□□□ 0.45
PRKN-210ENST00000612540 SBNO2Q9Y2G9 1366 aa17.89■□□□□ 0.45
PRKN-210ENST00000612540 COL16A1Q07092 1604 aaPredicted RBP17.88■□□□□ 0.45
PRKN-210ENST00000612540 C14orf37Q86TY3 774 aa17.86■□□□□ 0.45
PRKN-210ENST00000612540 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
PRKN-210ENST00000612540 EVC2Q86UK5 1308 aa17.85■□□□□ 0.45
PRKN-210ENST00000612540 NALCNQ8IZF0 1738 aa17.85■□□□□ 0.45
PRKN-210ENST00000612540 C19orf44Q9H6X5 657 aa17.85■□□□□ 0.45
PRKN-210ENST00000612540 TULP4Q9NRJ4 1543 aa17.85■□□□□ 0.45
PRKN-210ENST00000612540 CCDC7Q96M83 1385 aa17.84■□□□□ 0.45
PRKN-210ENST00000612540 JCADQ9P266 1359 aa17.84■□□□□ 0.45
PRKN-210ENST00000612540 ADGRB2O60241 1585 aa17.83■□□□□ 0.45
PRKN-210ENST00000612540 KIF7Q2M1P5 1343 aa17.83■□□□□ 0.44
PRKN-210ENST00000612540 C11orf95C9JLR9 678 aaPredicted RBP17.83■□□□□ 0.44
PRKN-210ENST00000612540 CADPS2Q86UW7 1296 aa17.83■□□□□ 0.44
PRKN-210ENST00000612540 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
PRKN-210ENST00000612540 CDCA8Q53HL2 280 aa17.82■□□□□ 0.44
PRKN-210ENST00000612540 POTEAQ6S8J7 498 aa17.82■□□□□ 0.44
PRKN-210ENST00000612540 SHPRHQ149N8 1683 aa17.82■□□□□ 0.44
PRKN-210ENST00000612540 AHDC1Q5TGY3 1603 aaPredicted RBP17.81■□□□□ 0.44
PRKN-210ENST00000612540 ATF3P18847 181 aa17.81■□□□□ 0.44
PRKN-210ENST00000612540 SRPK2P78362 688 aaKnown RBP17.81■□□□□ 0.44
PRKN-210ENST00000612540 ADGRL3Q9HAR2 1447 aa17.81■□□□□ 0.44
PRKN-210ENST00000612540 DCCP43146 1447 aa17.8■□□□□ 0.44
PRKN-210ENST00000612540 CABP2Q9NPB3 220 aa17.79■□□□□ 0.44
PRKN-210ENST00000612540 WASLO00401 505 aaPredicted RBP17.78■□□□□ 0.44
PRKN-210ENST00000612540 CDK19Q9BWU1 502 aa17.78■□□□□ 0.44
PRKN-210ENST00000612540 CDC42BPGQ6DT37 1551 aa17.78■□□□□ 0.44
PRKN-210ENST00000612540 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.44
PRKN-210ENST00000612540 LRP6O75581 1613 aa17.76■□□□□ 0.43
PRKN-210ENST00000612540 BRINP3Q76B58 766 aa17.76■□□□□ 0.43
PRKN-210ENST00000612540 MYOM1P52179 1685 aa17.76■□□□□ 0.43
PRKN-210ENST00000612540 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
PRKN-210ENST00000612540 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
PRKN-210ENST00000612540 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
PRKN-210ENST00000612540 ATAD2Q6PL18 1390 aa17.75■□□□□ 0.43
PRKN-210ENST00000612540 MST1RQ04912 1400 aa17.74■□□□□ 0.43
PRKN-210ENST00000612540 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
PRKN-210ENST00000612540 TMC1Q8TDI8 760 aa17.74■□□□□ 0.43
PRKN-210ENST00000612540 ITSN1Q15811 1721 aa17.73■□□□□ 0.43
PRKN-210ENST00000612540 RGPD8O14715 1765 aaPredicted RBP17.73■□□□□ 0.43
PRKN-210ENST00000612540 ATP7BP35670 1465 aa17.71■□□□□ 0.43
PRKN-210ENST00000612540 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
PRKN-210ENST00000612540 USP32Q8NFA0 1604 aa17.7■□□□□ 0.42
PRKN-210ENST00000612540 NUDT16Q96DE0 195 aaKnown RBP17.7■□□□□ 0.42
PRKN-210ENST00000612540 TOPAZ1Q8N9V7 1692 aa17.7■□□□□ 0.42
PRKN-210ENST00000612540 MEX3CQ5U5Q3 659 aaKnown RBP17.69■□□□□ 0.42
PRKN-210ENST00000612540 ANKARQ7Z5J8 1434 aa17.69■□□□□ 0.42
PRKN-210ENST00000612540 PRR36Q9H6K5 1346 aa17.69■□□□□ 0.42
PRKN-210ENST00000612540 PPIP5K1Q6PFW1 1433 aa17.68■□□□□ 0.42
PRKN-210ENST00000612540 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
PRKN-210ENST00000612540 SLC12A5Q9H2X9 1139 aa17.66■□□□□ 0.42
PRKN-210ENST00000612540 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
PRKN-210ENST00000612540 ZNF772Q68DY9 489 aaPredicted RBP17.65■□□□□ 0.42
PRKN-210ENST00000612540 CABP1Q9NZU7 370 aa17.65■□□□□ 0.42
PRKN-210ENST00000612540 PANK3Q9H999 370 aa17.64■□□□□ 0.41
PRKN-210ENST00000612540 C1orf167Q5SNV9 1468 aa17.63■□□□□ 0.41
PRKN-210ENST00000612540 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
PRKN-210ENST00000612540 HDGFL2Q7Z4V5 671 aaPredicted RBP17.63■□□□□ 0.41
PRKN-210ENST00000612540 LRRC59Q96AG4 307 aaKnown RBP17.63■□□□□ 0.41
PRKN-210ENST00000612540 AKAP12Q02952 1782 aa17.62■□□□□ 0.41
PRKN-210ENST00000612540 NUTM2BA6NNL0 878 aaPredicted RBP17.62■□□□□ 0.41
PRKN-210ENST00000612540 NUTM2EB1AL46 878 aaPredicted RBP17.62■□□□□ 0.41
PRKN-210ENST00000612540 ESCO1Q5FWF5 840 aa17.62■□□□□ 0.41
PRKN-210ENST00000612540 NUTM2AQ8IVF1 878 aaPredicted RBP17.62■□□□□ 0.41
PRKN-210ENST00000612540 PMFBP1Q8TBY8 1022 aa17.62■□□□□ 0.41
PRKN-210ENST00000612540 DDX17Q92841 729 aaKnown RBP17.62■□□□□ 0.41
PRKN-210ENST00000612540 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
PRKN-210ENST00000612540 ANKRD36BQ8N2N9 1353 aa17.62■□□□□ 0.41
PRKN-210ENST00000612540 A0A1W2PP64 1363 aa17.61■□□□□ 0.41
PRKN-210ENST00000612540 KIF1AQ12756 1690 aa17.61■□□□□ 0.41
PRKN-210ENST00000612540 NGDNQ8NEJ9 315 aaKnown RBP17.6■□□□□ 0.41
PRKN-210ENST00000612540 PHF8Q9UPP1 1060 aa17.6■□□□□ 0.41
PRKN-210ENST00000612540 PNPLA6Q8IY17 1366 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms