RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 FAM13BQ9NYF5 915 aa11.1□□□□□ -0.63
LINC00547-201ENST00000612438 ABCC2Q92887 1545 aa11.1□□□□□ -0.63
LINC00547-201ENST00000612438 SCAF11Q99590 1463 aaKnown RBP11.1□□□□□ -0.63
LINC00547-201ENST00000612438 IGHDP01880 384 aa11.1□□□□□ -0.63
LINC00547-201ENST00000612438 MADDQ8WXG6 1647 aa11.1□□□□□ -0.63
LINC00547-201ENST00000612438 CDK11BP21127 795 aaKnown RBP11.09□□□□□ -0.63
LINC00547-201ENST00000612438 TRIM44Q96DX7 344 aaPredicted RBP11.09□□□□□ -0.63
LINC00547-201ENST00000612438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC00547-201ENST00000612438 SCAPERQ9BY12 1400 aa11.09□□□□□ -0.63
LINC00547-201ENST00000612438 USP19O94966 1318 aa11.09□□□□□ -0.63
LINC00547-201ENST00000612438 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
LINC00547-201ENST00000612438 NGEFQ8N5V2 710 aa11.09□□□□□ -0.63
LINC00547-201ENST00000612438 BCCIPQ9P287 314 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC00547-201ENST00000612438 PDE3AQ14432 1141 aa11.09□□□□□ -0.63
LINC00547-201ENST00000612438 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
LINC00547-201ENST00000612438 PRDM10Q9NQV6 1147 aa11.09□□□□□ -0.63
LINC00547-201ENST00000612438 MYH16Q9H6N6 1097 aa11.08□□□□□ -0.64
LINC00547-201ENST00000612438 CHD1O14646 1710 aa11.08□□□□□ -0.64
LINC00547-201ENST00000612438 TAF3Q5VWG9 929 aa11.08□□□□□ -0.64
LINC00547-201ENST00000612438 CGNL1Q0VF96 1302 aa11.08□□□□□ -0.64
LINC00547-201ENST00000612438 FSD2A1L4K1 749 aa11.07□□□□□ -0.64
LINC00547-201ENST00000612438 VGFO15240 615 aaPredicted RBP11.07□□□□□ -0.64
LINC00547-201ENST00000612438 PANK2Q9BZ23 570 aa11.07□□□□□ -0.64
LINC00547-201ENST00000612438 DMRT2Q9Y5R5 561 aa11.06□□□□□ -0.64
LINC00547-201ENST00000612438 MRE11P49959 708 aa11.06□□□□□ -0.64
LINC00547-201ENST00000612438 RIPK4P57078 832 aa11.06□□□□□ -0.64
LINC00547-201ENST00000612438 MAPK8IP3Q9UPT6 1336 aa11.06□□□□□ -0.64
LINC00547-201ENST00000612438 GTPBP4Q9BZE4 634 aaKnown RBP11.06□□□□□ -0.64
LINC00547-201ENST00000612438 LETM1O95202 739 aaPredicted RBP11.05□□□□□ -0.64
LINC00547-201ENST00000612438 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
LINC00547-201ENST00000612438 CLUAP1Q96AJ1 413 aa11.05□□□□□ -0.64
LINC00547-201ENST00000612438 NINLQ9Y2I6 1382 aa11.05□□□□□ -0.64
LINC00547-201ENST00000612438 MYOM1P52179 1685 aa11.05□□□□□ -0.64
LINC00547-201ENST00000612438 SEC24BO95487 1268 aa11.05□□□□□ -0.64
LINC00547-201ENST00000612438 PTPRTO14522 1441 aa11.04□□□□□ -0.64
LINC00547-201ENST00000612438 ZSCAN20P17040 1043 aaPredicted RBP11.04□□□□□ -0.64
LINC00547-201ENST00000612438 IRX3P78415 501 aaPredicted RBP11.04□□□□□ -0.64
LINC00547-201ENST00000612438 DNTTIP2Q5QJE6 756 aaKnown RBP11.04□□□□□ -0.64
LINC00547-201ENST00000612438 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.04□□□□□ -0.64
LINC00547-201ENST00000612438 ERBB4Q15303 1308 aa11.04□□□□□ -0.64
LINC00547-201ENST00000612438 BECN1Q14457 450 aa11.04□□□□□ -0.64
LINC00547-201ENST00000612438 TRPM2O94759 1503 aa11.03□□□□□ -0.64
LINC00547-201ENST00000612438 SPHKAPQ2M3C7 1700 aa11.03□□□□□ -0.64
LINC00547-201ENST00000612438 PANK1Q8TE04 598 aa11.03□□□□□ -0.64
LINC00547-201ENST00000612438 CARD14Q9BXL6 1004 aa11.03□□□□□ -0.64
LINC00547-201ENST00000612438 COG6Q9Y2V7 657 aa11.03□□□□□ -0.64
LINC00547-201ENST00000612438 WWC1Q8IX03 1113 aa11.03□□□□□ -0.64
LINC00547-201ENST00000612438 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.64
LINC00547-201ENST00000612438 PLCH2O75038 1416 aa11.02□□□□□ -0.64
LINC00547-201ENST00000612438 VIRMAQ69YN4 1812 aaKnown RBP11.02□□□□□ -0.65
LINC00547-201ENST00000612438 OFD1O75665 1012 aa11.02□□□□□ -0.65
LINC00547-201ENST00000612438 SENP3Q9H4L4 574 aaPredicted RBP11.02□□□□□ -0.65
LINC00547-201ENST00000612438 POLR3AO14802 1390 aaPredicted RBP11.01□□□□□ -0.65
LINC00547-201ENST00000612438 KDM5AP29375 1690 aaKnown RBP11.01□□□□□ -0.65
LINC00547-201ENST00000612438 OSCARQ8IYS5 282 aa11.01□□□□□ -0.65
LINC00547-201ENST00000612438 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
LINC00547-201ENST00000612438 TRAPPC8Q9Y2L5 1435 aa11.01□□□□□ -0.65
LINC00547-201ENST00000612438 NLRP1Q9C000 1473 aa11□□□□□ -0.65
LINC00547-201ENST00000612438 CEP152O94986 1710 aa11□□□□□ -0.65
LINC00547-201ENST00000612438 AFAP1Q8N556 730 aa11□□□□□ -0.65
LINC00547-201ENST00000612438 PMFBP1Q8TBY8 1022 aa11□□□□□ -0.65
LINC00547-201ENST00000612438 CCDC94Q9BW85 323 aaPredicted RBP11□□□□□ -0.65
LINC00547-201ENST00000612438 ERVK-7P63135 1459 aa11□□□□□ -0.65
LINC00547-201ENST00000612438 CLTCL1P53675 1640 aa11□□□□□ -0.65
LINC00547-201ENST00000612438 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
LINC00547-201ENST00000612438 CYB5RLQ6IPT4 315 aa10.99□□□□□ -0.65
LINC00547-201ENST00000612438 ARID3AQ99856 593 aa10.99□□□□□ -0.65
LINC00547-201ENST00000612438 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
LINC00547-201ENST00000612438 KIAA1210Q9ULL0 1709 aa10.99□□□□□ -0.65
LINC00547-201ENST00000612438 RARSP54136 660 aaKnown RBP10.99□□□□□ -0.65
LINC00547-201ENST00000612438 ZMYM3Q14202 1370 aa10.99□□□□□ -0.65
LINC00547-201ENST00000612438 CFAP70Q5T0N1 1121 aa10.99□□□□□ -0.65
LINC00547-201ENST00000612438 ISY1Q9ULR0 285 aaKnown RBP10.99□□□□□ -0.65
LINC00547-201ENST00000612438 SLKQ9H2G2 1235 aaPredicted RBP10.98□□□□□ -0.65
LINC00547-201ENST00000612438 PCDHB15Q9Y5E8 787 aa10.98□□□□□ -0.65
LINC00547-201ENST00000612438 SPAG9O60271 1321 aaKnown RBP10.98□□□□□ -0.65
LINC00547-201ENST00000612438 ABCC1P33527 1531 aa10.98□□□□□ -0.65
LINC00547-201ENST00000612438 TULP1O00294 542 aaPredicted RBP10.98□□□□□ -0.65
LINC00547-201ENST00000612438 TBC1D32Q96NH3 1257 aa10.98□□□□□ -0.65
LINC00547-201ENST00000612438 RTEL1-TNFRSF6BF6WH68 1400 aa10.98□□□□□ -0.65
LINC00547-201ENST00000612438 GRPEL1Q9HAV7 217 aa10.97□□□□□ -0.65
LINC00547-201ENST00000612438 DYNC1I1O14576 645 aa10.97□□□□□ -0.65
LINC00547-201ENST00000612438 RUNDC1Q96C34 613 aa10.97□□□□□ -0.65
LINC00547-201ENST00000612438 PHF23Q9BUL5 403 aaPredicted RBP10.97□□□□□ -0.65
LINC00547-201ENST00000612438 UPF2Q9HAU5 1272 aaKnown RBP10.97□□□□□ -0.65
LINC00547-201ENST00000612438 RLBP1P12271 317 aa10.96□□□□□ -0.65
LINC00547-201ENST00000612438 WDR63Q8IWG1 891 aa10.96□□□□□ -0.65
LINC00547-201ENST00000612438 PDZRN3Q9UPQ7 1066 aa10.96□□□□□ -0.65
LINC00547-201ENST00000612438 NEURL4Q96JN8 1562 aa10.96□□□□□ -0.66
LINC00547-201ENST00000612438 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.66
LINC00547-201ENST00000612438 TBC1D2Q9BYX2 928 aa10.96□□□□□ -0.66
LINC00547-201ENST00000612438 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
LINC00547-201ENST00000612438 ADGRF5Q8IZF2 1346 aa10.95□□□□□ -0.66
LINC00547-201ENST00000612438 TCP11L2Q8N4U5 519 aa10.95□□□□□ -0.66
LINC00547-201ENST00000612438 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
LINC00547-201ENST00000612438 R3HCC1Q9Y3T6 440 aaKnown RBP10.95□□□□□ -0.66
LINC00547-201ENST00000612438 MSNP26038 577 aaKnown RBP10.95□□□□□ -0.66
LINC00547-201ENST00000612438 RWDD1Q9H446 243 aaPredicted RBP10.95□□□□□ -0.66
LINC00547-201ENST00000612438 TNNQ9UQP3 1299 aa10.95□□□□□ -0.66
LINC00547-201ENST00000612438 RRP7AQ9Y3A4 280 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms