RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 SIRT1Q96EB6 747 aa16.82■□□□□ 0.28
CBWD1-220ENST00000612045 TBX22Q9Y458 520 aa16.82■□□□□ 0.28
CBWD1-220ENST00000612045 PLEKHH1Q9ULM0 1364 aa16.81■□□□□ 0.28
CBWD1-220ENST00000612045 RALBP1Q15311 655 aa16.81■□□□□ 0.28
CBWD1-220ENST00000612045 FAM135BQ49AJ0 1406 aa16.8■□□□□ 0.28
CBWD1-220ENST00000612045 CPS1P31327 1500 aa16.8■□□□□ 0.28
CBWD1-220ENST00000612045 DIP2AQ14689 1571 aa16.8■□□□□ 0.28
CBWD1-220ENST00000612045 ANKLE2Q86XL3 938 aa16.8■□□□□ 0.28
CBWD1-220ENST00000612045 CABP2Q9NPB3 220 aa16.8■□□□□ 0.28
CBWD1-220ENST00000612045 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
CBWD1-220ENST00000612045 CCDC184Q52MB2 194 aa16.79■□□□□ 0.28
CBWD1-220ENST00000612045 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
CBWD1-220ENST00000612045 TMC1Q8TDI8 760 aa16.78■□□□□ 0.28
CBWD1-220ENST00000612045 PARD3Q8TEW0 1356 aa16.78■□□□□ 0.28
CBWD1-220ENST00000612045 SRPK2P78362 688 aaKnown RBP16.77■□□□□ 0.28
CBWD1-220ENST00000612045 SLC12A5Q9H2X9 1139 aa16.77■□□□□ 0.28
CBWD1-220ENST00000612045 PTPRUQ92729 1446 aa16.77■□□□□ 0.28
CBWD1-220ENST00000612045 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.27
CBWD1-220ENST00000612045 MRS2Q9HD23 443 aa16.77■□□□□ 0.27
CBWD1-220ENST00000612045 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.27
CBWD1-220ENST00000612045 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
CBWD1-220ENST00000612045 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
CBWD1-220ENST00000612045 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
CBWD1-220ENST00000612045 ATAD2Q6PL18 1390 aa16.75■□□□□ 0.27
CBWD1-220ENST00000612045 CARD14Q9BXL6 1004 aa16.75■□□□□ 0.27
CBWD1-220ENST00000612045 NINLQ9Y2I6 1382 aa16.74■□□□□ 0.27
CBWD1-220ENST00000612045 AMOTL2Q9Y2J4 779 aa16.74■□□□□ 0.27
CBWD1-220ENST00000612045 NPC1L1Q9UHC9 1359 aa16.73■□□□□ 0.27
CBWD1-220ENST00000612045 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
CBWD1-220ENST00000612045 PTCH1Q13635 1447 aa16.71■□□□□ 0.27
CBWD1-220ENST00000612045 ANKRD36BQ8N2N9 1353 aa16.71■□□□□ 0.27
CBWD1-220ENST00000612045 KDM4FA0A1W2PPD8 638 aa16.71■□□□□ 0.27
CBWD1-220ENST00000612045 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.27
CBWD1-220ENST00000612045 NSD3Q9BZ95 1437 aa16.7■□□□□ 0.26
CBWD1-220ENST00000612045 BRD4O60885 1362 aaPredicted RBP16.7■□□□□ 0.26
CBWD1-220ENST00000612045 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
CBWD1-220ENST00000612045 XRN1Q8IZH2 1706 aaKnown RBP16.69■□□□□ 0.26
CBWD1-220ENST00000612045 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.68■□□□□ 0.26
CBWD1-220ENST00000612045 NPHP4O75161 1426 aaPredicted RBP16.68■□□□□ 0.26
CBWD1-220ENST00000612045 ADGRB2O60241 1585 aa16.67■□□□□ 0.26
CBWD1-220ENST00000612045 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
CBWD1-220ENST00000612045 A0A1W2PP64 1363 aa16.67■□□□□ 0.26
CBWD1-220ENST00000612045 NCKAP5LQ9HCH0 1330 aa16.67■□□□□ 0.26
CBWD1-220ENST00000612045 TERF2IPQ9NYB0 399 aa16.66■□□□□ 0.26
CBWD1-220ENST00000612045 CABP1Q9NZU7 370 aa16.66■□□□□ 0.26
CBWD1-220ENST00000612045 CD163L1Q9NR16 1453 aa16.66■□□□□ 0.26
CBWD1-220ENST00000612045 USP32Q8NFA0 1604 aa16.66■□□□□ 0.26
CBWD1-220ENST00000612045 KCNA6P17658 529 aa16.66■□□□□ 0.26
CBWD1-220ENST00000612045 CHD2O14647 1828 aaKnown RBP16.65■□□□□ 0.26
CBWD1-220ENST00000612045 CGNL1Q0VF96 1302 aa16.65■□□□□ 0.26
CBWD1-220ENST00000612045 PNISRQ8TF01 805 aaKnown RBP16.64■□□□□ 0.25
CBWD1-220ENST00000612045 NUDT16Q96DE0 195 aaKnown RBP16.64■□□□□ 0.25
CBWD1-220ENST00000612045 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
CBWD1-220ENST00000612045 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
CBWD1-220ENST00000612045 ATP7BP35670 1465 aa16.63■□□□□ 0.25
CBWD1-220ENST00000612045 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
CBWD1-220ENST00000612045 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
CBWD1-220ENST00000612045 PRR36Q9H6K5 1346 aa16.61■□□□□ 0.25
CBWD1-220ENST00000612045 NSD2O96028 1365 aa16.6■□□□□ 0.25
CBWD1-220ENST00000612045 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.25
CBWD1-220ENST00000612045 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
CBWD1-220ENST00000612045 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.25
CBWD1-220ENST00000612045 HSPA2P54652 639 aa16.57■□□□□ 0.24
CBWD1-220ENST00000612045 CDC42BPGQ6DT37 1551 aa16.57■□□□□ 0.24
CBWD1-220ENST00000612045 LMTK3Q96Q04 1460 aa16.56■□□□□ 0.24
CBWD1-220ENST00000612045 NUTM2FA1L443 756 aa16.56■□□□□ 0.24
CBWD1-220ENST00000612045 TOPAZ1Q8N9V7 1692 aa16.55■□□□□ 0.24
CBWD1-220ENST00000612045 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
CBWD1-220ENST00000612045 FYB1O15117 783 aa16.55■□□□□ 0.24
CBWD1-220ENST00000612045 PLEKHG3A1L390 1219 aa16.54■□□□□ 0.24
CBWD1-220ENST00000612045 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
CBWD1-220ENST00000612045 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
CBWD1-220ENST00000612045 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
CBWD1-220ENST00000612045 ZNF692Q9BU19 519 aaPredicted RBP16.53■□□□□ 0.24
CBWD1-220ENST00000612045 AKAP12Q02952 1782 aa16.53■□□□□ 0.24
CBWD1-220ENST00000612045 ITSN1Q15811 1721 aa16.52■□□□□ 0.24
CBWD1-220ENST00000612045 NALCNQ8IZF0 1738 aa16.52■□□□□ 0.24
CBWD1-220ENST00000612045 MON2Q7Z3U7 1717 aa16.52■□□□□ 0.23
CBWD1-220ENST00000612045 KIF20BQ96Q89 1820 aa16.52■□□□□ 0.23
CBWD1-220ENST00000612045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.52■□□□□ 0.23
CBWD1-220ENST00000612045 RBM33Q96EV2 1170 aaKnown RBP16.52■□□□□ 0.23
CBWD1-220ENST00000612045 ANKARQ7Z5J8 1434 aa16.51■□□□□ 0.23
CBWD1-220ENST00000612045 ANKRD26Q9UPS8 1709 aa16.51■□□□□ 0.23
CBWD1-220ENST00000612045 ACEP12821 1306 aa16.51■□□□□ 0.23
CBWD1-220ENST00000612045 ADGRL3Q9HAR2 1447 aa16.51■□□□□ 0.23
CBWD1-220ENST00000612045 FMN2Q9NZ56 1722 aa16.51■□□□□ 0.23
CBWD1-220ENST00000612045 NKTRP30414 1462 aaKnown RBP16.5■□□□□ 0.23
CBWD1-220ENST00000612045 ZBED9Q6R2W3 1325 aa16.5■□□□□ 0.23
CBWD1-220ENST00000612045 POLR3AO14802 1390 aaPredicted RBP16.49■□□□□ 0.23
CBWD1-220ENST00000612045 INSRP06213 1382 aa16.49■□□□□ 0.23
CBWD1-220ENST00000612045 RGPD8O14715 1765 aaPredicted RBP16.49■□□□□ 0.23
CBWD1-220ENST00000612045 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
CBWD1-220ENST00000612045 PROSER2Q86WR7 435 aaPredicted RBP16.47■□□□□ 0.23
CBWD1-220ENST00000612045 PMFBP1Q8TBY8 1022 aa16.47■□□□□ 0.23
CBWD1-220ENST00000612045 STRCQ7RTU9 1775 aa16.47■□□□□ 0.23
CBWD1-220ENST00000612045 MTHFSP49914 203 aa16.47■□□□□ 0.23
CBWD1-220ENST00000612045 C14orf37Q86TY3 774 aa16.47■□□□□ 0.23
CBWD1-220ENST00000612045 USP6P35125 1406 aa16.46■□□□□ 0.23
CBWD1-220ENST00000612045 NME9Q86XW9 330 aa16.46■□□□□ 0.23
CBWD1-220ENST00000612045 ADAMTS8Q9UP79 889 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms