RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 ASXL1Q8IXJ9 1541 aa18.59■□□□□ 0.57
COPS7B-223ENST00000611614 PLEKHG1Q9ULL1 1385 aa18.58■□□□□ 0.57
COPS7B-223ENST00000611614 PRAM1Q96QH2 718 aa18.58■□□□□ 0.57
COPS7B-223ENST00000611614 NLRP13Q86W25 1043 aa18.58■□□□□ 0.56
COPS7B-223ENST00000611614 SLIT1O75093 1534 aa18.57■□□□□ 0.56
COPS7B-223ENST00000611614 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
COPS7B-223ENST00000611614 QRICH2Q9H0J4 1663 aa18.56■□□□□ 0.56
COPS7B-223ENST00000611614 CEP170BQ9Y4F5 1589 aaPredicted RBP18.56■□□□□ 0.56
COPS7B-223ENST00000611614 ARHGEF28Q8N1W1 1705 aaKnown RBP18.55■□□□□ 0.56
COPS7B-223ENST00000611614 PTPRMP28827 1452 aa18.55■□□□□ 0.56
COPS7B-223ENST00000611614 ARHGAP23Q9P227 1491 aa18.55■□□□□ 0.56
COPS7B-223ENST00000611614 KNSTRNQ9Y448 316 aa18.55■□□□□ 0.56
COPS7B-223ENST00000611614 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
COPS7B-223ENST00000611614 MSH5O43196 834 aa18.54■□□□□ 0.56
COPS7B-223ENST00000611614 METP08581 1390 aa18.54■□□□□ 0.56
COPS7B-223ENST00000611614 SETD1BQ9UPS6 1966 aaKnown RBP18.54■□□□□ 0.56
COPS7B-223ENST00000611614 PUS7Q96PZ0 661 aaKnown RBP18.54■□□□□ 0.56
COPS7B-223ENST00000611614 BCL11AQ9H165 835 aa18.53■□□□□ 0.56
COPS7B-223ENST00000611614 MINK1Q8N4C8 1332 aaPredicted RBP18.52■□□□□ 0.56
COPS7B-223ENST00000611614 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.56
COPS7B-223ENST00000611614 RNF123Q5XPI4 1314 aa18.52■□□□□ 0.56
COPS7B-223ENST00000611614 ANKLE2Q86XL3 938 aa18.52■□□□□ 0.56
COPS7B-223ENST00000611614 SRPK2P78362 688 aaKnown RBP18.51■□□□□ 0.55
COPS7B-223ENST00000611614 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
COPS7B-223ENST00000611614 DLC1Q96QB1 1528 aa18.51■□□□□ 0.55
COPS7B-223ENST00000611614 ADAMTS13Q76LX8 1427 aa18.5■□□□□ 0.55
COPS7B-223ENST00000611614 TBX22Q9Y458 520 aa18.5■□□□□ 0.55
COPS7B-223ENST00000611614 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
COPS7B-223ENST00000611614 SETD1AO15047 1707 aaKnown RBP18.49■□□□□ 0.55
COPS7B-223ENST00000611614 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
COPS7B-223ENST00000611614 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
COPS7B-223ENST00000611614 CABP2Q9NPB3 220 aa18.48■□□□□ 0.55
COPS7B-223ENST00000611614 INSRP06213 1382 aa18.46■□□□□ 0.55
COPS7B-223ENST00000611614 FAM135BQ49AJ0 1406 aa18.46■□□□□ 0.55
COPS7B-223ENST00000611614 SENP3-EIF4A1A0A087X0R7 540 aa18.46■□□□□ 0.55
COPS7B-223ENST00000611614 ZNF142P52746 1687 aaPredicted RBP18.45■□□□□ 0.54
COPS7B-223ENST00000611614 ATAD2Q6PL18 1390 aa18.45■□□□□ 0.54
COPS7B-223ENST00000611614 TULP4Q9NRJ4 1543 aa18.45■□□□□ 0.54
COPS7B-223ENST00000611614 TECPR2O15040 1411 aa18.45■□□□□ 0.54
COPS7B-223ENST00000611614 CDK19Q9BWU1 502 aa18.45■□□□□ 0.54
COPS7B-223ENST00000611614 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
COPS7B-223ENST00000611614 B4GALNT3Q6L9W6 998 aa18.44■□□□□ 0.54
COPS7B-223ENST00000611614 NINLQ9Y2I6 1382 aa18.44■□□□□ 0.54
COPS7B-223ENST00000611614 MED14O60244 1454 aa18.44■□□□□ 0.54
COPS7B-223ENST00000611614 PLEKHH1Q9ULM0 1364 aa18.43■□□□□ 0.54
COPS7B-223ENST00000611614 DIP2AQ14689 1571 aa18.43■□□□□ 0.54
COPS7B-223ENST00000611614 AMOTL2Q9Y2J4 779 aa18.43■□□□□ 0.54
COPS7B-223ENST00000611614 MYOM1P52179 1685 aa18.43■□□□□ 0.54
COPS7B-223ENST00000611614 PDE3BQ13370 1112 aa18.42■□□□□ 0.54
COPS7B-223ENST00000611614 KNDC1Q76NI1 1749 aa18.4■□□□□ 0.54
COPS7B-223ENST00000611614 AMER1Q5JTC6 1135 aaPredicted RBP18.4■□□□□ 0.54
COPS7B-223ENST00000611614 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
COPS7B-223ENST00000611614 CPS1P31327 1500 aa18.4■□□□□ 0.54
COPS7B-223ENST00000611614 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
COPS7B-223ENST00000611614 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
COPS7B-223ENST00000611614 PIK3R4Q99570 1358 aa18.39■□□□□ 0.53
COPS7B-223ENST00000611614 ROBO2Q9HCK4 1378 aa18.39■□□□□ 0.53
COPS7B-223ENST00000611614 NPC1L1Q9UHC9 1359 aa18.39■□□□□ 0.53
COPS7B-223ENST00000611614 CARD14Q9BXL6 1004 aa18.39■□□□□ 0.53
COPS7B-223ENST00000611614 ANKRD36BQ8N2N9 1353 aa18.38■□□□□ 0.53
COPS7B-223ENST00000611614 HDGFL2Q7Z4V5 671 aaPredicted RBP18.37■□□□□ 0.53
COPS7B-223ENST00000611614 NSD3Q9BZ95 1437 aa18.36■□□□□ 0.53
COPS7B-223ENST00000611614 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
COPS7B-223ENST00000611614 PTPRUQ92729 1446 aa18.36■□□□□ 0.53
COPS7B-223ENST00000611614 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
COPS7B-223ENST00000611614 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
COPS7B-223ENST00000611614 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
COPS7B-223ENST00000611614 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
COPS7B-223ENST00000611614 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
COPS7B-223ENST00000611614 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.52
COPS7B-223ENST00000611614 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
COPS7B-223ENST00000611614 KCNA6P17658 529 aa18.32■□□□□ 0.52
COPS7B-223ENST00000611614 NUDT16Q96DE0 195 aaKnown RBP18.32■□□□□ 0.52
COPS7B-223ENST00000611614 CCDC136Q96JN2 1154 aa18.32■□□□□ 0.52
COPS7B-223ENST00000611614 NCKAP5LQ9HCH0 1330 aa18.32■□□□□ 0.52
COPS7B-223ENST00000611614 CCDC61Q9Y6R9 512 aa18.31■□□□□ 0.52
COPS7B-223ENST00000611614 KDM4FA0A1W2PPD8 638 aa18.31■□□□□ 0.52
COPS7B-223ENST00000611614 A0A1W2PP64 1363 aa18.3■□□□□ 0.52
COPS7B-223ENST00000611614 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
COPS7B-223ENST00000611614 ADAMTS8Q9UP79 889 aa18.29■□□□□ 0.52
COPS7B-223ENST00000611614 CDCA7LQ96GN5 454 aa18.28■□□□□ 0.52
COPS7B-223ENST00000611614 NSD2O96028 1365 aa18.28■□□□□ 0.52
COPS7B-223ENST00000611614 PPIP5K1Q6PFW1 1433 aa18.28■□□□□ 0.52
COPS7B-223ENST00000611614 WDR43Q15061 677 aaKnown RBP eCLIP18.27■□□□□ 0.52
COPS7B-223ENST00000611614 ATP7BP35670 1465 aa18.26■□□□□ 0.51
COPS7B-223ENST00000611614 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
COPS7B-223ENST00000611614 ADGRB2O60241 1585 aa18.25■□□□□ 0.51
COPS7B-223ENST00000611614 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.24■□□□□ 0.51
COPS7B-223ENST00000611614 NUTM2FA1L443 756 aa18.24■□□□□ 0.51
COPS7B-223ENST00000611614 USP32Q8NFA0 1604 aa18.24■□□□□ 0.51
COPS7B-223ENST00000611614 ZNF692Q9BU19 519 aaPredicted RBP18.24■□□□□ 0.51
COPS7B-223ENST00000611614 NOP58Q9Y2X3 529 aaKnown RBP18.24■□□□□ 0.51
COPS7B-223ENST00000611614 TNNT2P45379 298 aaPredicted RBP18.23■□□□□ 0.51
COPS7B-223ENST00000611614 HSPA2P54652 639 aa18.23■□□□□ 0.51
COPS7B-223ENST00000611614 CD163L1Q9NR16 1453 aa18.22■□□□□ 0.51
COPS7B-223ENST00000611614 C14orf37Q86TY3 774 aa18.22■□□□□ 0.51
COPS7B-223ENST00000611614 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
COPS7B-223ENST00000611614 CHD2O14647 1828 aaKnown RBP18.21■□□□□ 0.51
COPS7B-223ENST00000611614 EXOC6Q8TAG9 804 aa18.21■□□□□ 0.51
COPS7B-223ENST00000611614 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms