RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 TBC1D32Q96NH3 1257 aa19.35■□□□□ 0.69
PCDHGB1-202ENST00000611598 KANK1Q14678 1352 aa19.34■□□□□ 0.69
PCDHGB1-202ENST00000611598 MYOM2P54296 1465 aa19.34■□□□□ 0.69
PCDHGB1-202ENST00000611598 IQSEC2Q5JU85 1478 aa19.34■□□□□ 0.69
PCDHGB1-202ENST00000611598 TBC1D2Q9BYX2 928 aa19.34■□□□□ 0.69
PCDHGB1-202ENST00000611598 SLC12A5Q9H2X9 1139 aa19.34■□□□□ 0.69
PCDHGB1-202ENST00000611598 VWDEQ8N2E2 1590 aa19.33■□□□□ 0.69
PCDHGB1-202ENST00000611598 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.69
PCDHGB1-202ENST00000611598 SLC24A1O60721 1099 aa19.33■□□□□ 0.68
PCDHGB1-202ENST00000611598 FAM43AQ8N2R8 423 aa19.33■□□□□ 0.68
PCDHGB1-202ENST00000611598 UPF2Q9HAU5 1272 aaKnown RBP19.31■□□□□ 0.68
PCDHGB1-202ENST00000611598 TRAK1Q9UPV9 953 aa19.31■□□□□ 0.68
PCDHGB1-202ENST00000611598 EIF5BO60841 1220 aaKnown RBP19.3■□□□□ 0.68
PCDHGB1-202ENST00000611598 SPRYD3Q8NCJ5 442 aa19.3■□□□□ 0.68
PCDHGB1-202ENST00000611598 SBNO2Q9Y2G9 1366 aa19.29■□□□□ 0.68
PCDHGB1-202ENST00000611598 ATP7AQ04656 1500 aa19.29■□□□□ 0.68
PCDHGB1-202ENST00000611598 MTHFSP49914 203 aa19.29■□□□□ 0.68
PCDHGB1-202ENST00000611598 MROH2AA6NES4 1674 aa19.29■□□□□ 0.68
PCDHGB1-202ENST00000611598 WDR63Q8IWG1 891 aa19.29■□□□□ 0.68
PCDHGB1-202ENST00000611598 NEURL4Q96JN8 1562 aa19.28■□□□□ 0.68
PCDHGB1-202ENST00000611598 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
PCDHGB1-202ENST00000611598 MROH1Q8NDA8 1641 aa19.27■□□□□ 0.68
PCDHGB1-202ENST00000611598 ARXQ96QS3 562 aa19.27■□□□□ 0.68
PCDHGB1-202ENST00000611598 NOS1P29475 1434 aa19.27■□□□□ 0.67
PCDHGB1-202ENST00000611598 RWDD1Q9H446 243 aaPredicted RBP19.27■□□□□ 0.67
PCDHGB1-202ENST00000611598 IFT172Q9UG01 1749 aa19.27■□□□□ 0.67
PCDHGB1-202ENST00000611598 AAMPQ13685 434 aa19.26■□□□□ 0.67
PCDHGB1-202ENST00000611598 INO80Q9ULG1 1556 aaPredicted RBP19.26■□□□□ 0.67
PCDHGB1-202ENST00000611598 KIF1BO60333 1816 aa19.26■□□□□ 0.67
PCDHGB1-202ENST00000611598 CHGAP10645 457 aaKnown RBP19.26■□□□□ 0.67
PCDHGB1-202ENST00000611598 NRXN1Q9ULB1 1477 aa19.26■□□□□ 0.67
PCDHGB1-202ENST00000611598 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
PCDHGB1-202ENST00000611598 ZMYM3Q14202 1370 aa19.25■□□□□ 0.67
PCDHGB1-202ENST00000611598 MVPQ14764 893 aaKnown RBP19.25■□□□□ 0.67
PCDHGB1-202ENST00000611598 TMEM132EQ6IEE7 984 aa19.24■□□□□ 0.67
PCDHGB1-202ENST00000611598 RRAGDQ9NQL2 400 aaPredicted RBP19.24■□□□□ 0.67
PCDHGB1-202ENST00000611598 CCDC27Q2M243 656 aa19.23■□□□□ 0.67
PCDHGB1-202ENST00000611598 TSR2Q969E8 191 aaKnown RBP19.23■□□□□ 0.67
PCDHGB1-202ENST00000611598 UHRF1BP1LA0JNW5 1464 aa19.23■□□□□ 0.67
PCDHGB1-202ENST00000611598 EFCAB6Q5THR3 1501 aa19.22■□□□□ 0.67
PCDHGB1-202ENST00000611598 FANCAO15360 1455 aa19.22■□□□□ 0.67
PCDHGB1-202ENST00000611598 ARAP3Q8WWN8 1544 aa19.21■□□□□ 0.67
PCDHGB1-202ENST00000611598 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
PCDHGB1-202ENST00000611598 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.67
PCDHGB1-202ENST00000611598 MYH16Q9H6N6 1097 aa19.21■□□□□ 0.67
PCDHGB1-202ENST00000611598 MFAP1P55081 439 aaKnown RBP19.21■□□□□ 0.67
PCDHGB1-202ENST00000611598 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
PCDHGB1-202ENST00000611598 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
PCDHGB1-202ENST00000611598 PPRC1Q5VV67 1664 aaKnown RBP19.2■□□□□ 0.66
PCDHGB1-202ENST00000611598 QRICH2Q9H0J4 1663 aa19.2■□□□□ 0.66
PCDHGB1-202ENST00000611598 ZKSCAN2Q63HK3 967 aa19.2■□□□□ 0.66
PCDHGB1-202ENST00000611598 DZIP1LQ8IYY4 767 aaKnown RBP19.2■□□□□ 0.66
PCDHGB1-202ENST00000611598 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
PCDHGB1-202ENST00000611598 GZF1Q9H116 711 aaPredicted RBP19.2■□□□□ 0.66
PCDHGB1-202ENST00000611598 ZC3H13Q5T200 1668 aaKnown RBP19.19■□□□□ 0.66
PCDHGB1-202ENST00000611598 MCM4P33991 863 aa19.19■□□□□ 0.66
PCDHGB1-202ENST00000611598 C22orf23Q9BZE7 217 aa19.19■□□□□ 0.66
PCDHGB1-202ENST00000611598 RSPH6AQ9H0K4 717 aa19.19■□□□□ 0.66
PCDHGB1-202ENST00000611598 SETBP1Q9Y6X0 1596 aa19.18■□□□□ 0.66
PCDHGB1-202ENST00000611598 XRCC6P12956 609 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCDHGB1-202ENST00000611598 ADGRB3O60242 1522 aa19.18■□□□□ 0.66
PCDHGB1-202ENST00000611598 TRIM27P14373 513 aa19.17■□□□□ 0.66
PCDHGB1-202ENST00000611598 C14orf93Q9H972 538 aaKnown RBP19.17■□□□□ 0.66
PCDHGB1-202ENST00000611598 SMC4Q9NTJ3 1288 aa19.17■□□□□ 0.66
PCDHGB1-202ENST00000611598 ADGRL1O94910 1474 aa19.17■□□□□ 0.66
PCDHGB1-202ENST00000611598 ADGRB1O14514 1584 aa19.16■□□□□ 0.66
PCDHGB1-202ENST00000611598 PANK2Q9BZ23 570 aa19.16■□□□□ 0.66
PCDHGB1-202ENST00000611598 EXOSC9Q06265 439 aaKnown RBP19.16■□□□□ 0.66
PCDHGB1-202ENST00000611598 RIMBP3CA6NJZ7 1639 aa19.16■□□□□ 0.66
PCDHGB1-202ENST00000611598 RIMBP3BA6NNM3 1639 aa19.16■□□□□ 0.66
PCDHGB1-202ENST00000611598 ABCA9Q8IUA7 1624 aa19.16■□□□□ 0.66
PCDHGB1-202ENST00000611598 RIMBP3Q9UFD9 1639 aa19.16■□□□□ 0.66
PCDHGB1-202ENST00000611598 FSD2A1L4K1 749 aa19.15■□□□□ 0.66
PCDHGB1-202ENST00000611598 USP32Q8NFA0 1604 aa19.15■□□□□ 0.66
PCDHGB1-202ENST00000611598 GOLGA6L3A6NEY3 463 aa19.14■□□□□ 0.65
PCDHGB1-202ENST00000611598 ITPRIPQ8IWB1 547 aa19.14■□□□□ 0.65
PCDHGB1-202ENST00000611598 SSH1Q8WYL5 1049 aa19.14■□□□□ 0.65
PCDHGB1-202ENST00000611598 ADGRB2O60241 1585 aa19.14■□□□□ 0.65
PCDHGB1-202ENST00000611598 CFAP65Q6ZU64 1925 aaKnown RBP19.13■□□□□ 0.65
PCDHGB1-202ENST00000611598 CHMP5Q9NZZ3 219 aa19.13■□□□□ 0.65
PCDHGB1-202ENST00000611598 CD109Q6YHK3 1445 aa19.13■□□□□ 0.65
PCDHGB1-202ENST00000611598 NUTM2DQ5VT03 806 aaPredicted RBP19.12■□□□□ 0.65
PCDHGB1-202ENST00000611598 HDAC1Q13547 482 aaPredicted RBP19.12■□□□□ 0.65
PCDHGB1-202ENST00000611598 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
PCDHGB1-202ENST00000611598 ANKRD36BQ8N2N9 1353 aa19.1■□□□□ 0.65
PCDHGB1-202ENST00000611598 PPLO60437 1756 aa19.1■□□□□ 0.65
PCDHGB1-202ENST00000611598 TRAK2O60296 914 aa19.1■□□□□ 0.65
PCDHGB1-202ENST00000611598 CABP2Q9NPB3 220 aa19.1■□□□□ 0.65
PCDHGB1-202ENST00000611598 TRIM35Q9UPQ4 493 aa19.1■□□□□ 0.65
PCDHGB1-202ENST00000611598 ATF7IPQ6VMQ6 1270 aa19.1■□□□□ 0.65
PCDHGB1-202ENST00000611598 NOB1Q9ULX3 412 aaKnown RBP19.1■□□□□ 0.65
PCDHGB1-202ENST00000611598 TULP4Q9NRJ4 1543 aa19.1■□□□□ 0.65
PCDHGB1-202ENST00000611598 NPATQ14207 1427 aa19.09■□□□□ 0.65
PCDHGB1-202ENST00000611598 TMPOP42166 694 aaKnown RBP19.09■□□□□ 0.65
PCDHGB1-202ENST00000611598 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
PCDHGB1-202ENST00000611598 ZNF692Q9BU19 519 aaPredicted RBP19.09■□□□□ 0.65
PCDHGB1-202ENST00000611598 SAFB2Q14151 953 aaKnown RBP eCLIP19.09■□□□□ 0.65
PCDHGB1-202ENST00000611598 TMEM57Q8N5G2 664 aa19.09■□□□□ 0.65
PCDHGB1-202ENST00000611598 DDX19BQ9UMR2 479 aa19.09■□□□□ 0.65
PCDHGB1-202ENST00000611598 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms