RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 CLCN6P51797 869 aa11.16□□□□□ -0.62
CLK4-214ENST00000611575 NUBP1P53384 320 aa11.16□□□□□ -0.62
CLK4-214ENST00000611575 CHD2O14647 1828 aaKnown RBP11.16□□□□□ -0.62
CLK4-214ENST00000611575 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
CLK4-214ENST00000611575 SPATA31A6Q5VVP1 1343 aa11.15□□□□□ -0.62
CLK4-214ENST00000611575 ANKRD50Q9ULJ7 1429 aa11.15□□□□□ -0.62
CLK4-214ENST00000611575 RIMS2Q9UQ26 1411 aa11.15□□□□□ -0.62
CLK4-214ENST00000611575 DIP2AQ14689 1571 aa11.15□□□□□ -0.62
CLK4-214ENST00000611575 PHLPP1O60346 1717 aa11.14□□□□□ -0.63
CLK4-214ENST00000611575 UNC13BO14795 1591 aa11.13□□□□□ -0.63
CLK4-214ENST00000611575 CDK12Q9NYV4 1490 aaPredicted RBP11.12□□□□□ -0.63
CLK4-214ENST00000611575 SETD1AO15047 1707 aaKnown RBP11.12□□□□□ -0.63
CLK4-214ENST00000611575 DCCP43146 1447 aa11.12□□□□□ -0.63
CLK4-214ENST00000611575 SHPRHQ149N8 1683 aa11.12□□□□□ -0.63
CLK4-214ENST00000611575 DCBLD2Q96PD2 775 aa11.12□□□□□ -0.63
CLK4-214ENST00000611575 PTPRUQ92729 1446 aa11.11□□□□□ -0.63
CLK4-214ENST00000611575 BBXQ8WY36 941 aaPredicted RBP11.11□□□□□ -0.63
CLK4-214ENST00000611575 CHIC2Q9UKJ5 165 aa11.11□□□□□ -0.63
CLK4-214ENST00000611575 GCC2Q8IWJ2 1684 aa11.11□□□□□ -0.63
CLK4-214ENST00000611575 GSE1Q14687 1217 aa11.1□□□□□ -0.63
CLK4-214ENST00000611575 LHX8Q68G74 356 aa11.1□□□□□ -0.63
CLK4-214ENST00000611575 UPF1Q92900 1129 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLK4-214ENST00000611575 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
CLK4-214ENST00000611575 C19orf44Q9H6X5 657 aa11.1□□□□□ -0.63
CLK4-214ENST00000611575 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
CLK4-214ENST00000611575 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.09□□□□□ -0.63
CLK4-214ENST00000611575 ROCK1Q13464 1354 aa11.09□□□□□ -0.63
CLK4-214ENST00000611575 HDGFP51858 240 aaKnown RBP11.09□□□□□ -0.63
CLK4-214ENST00000611575 CADPS2Q86UW7 1296 aa11.09□□□□□ -0.63
CLK4-214ENST00000611575 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLK4-214ENST00000611575 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
CLK4-214ENST00000611575 ZNF772Q68DY9 489 aaPredicted RBP11.08□□□□□ -0.64
CLK4-214ENST00000611575 BRINP3Q76B58 766 aa11.08□□□□□ -0.64
CLK4-214ENST00000611575 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
CLK4-214ENST00000611575 NRXN3Q9Y4C0 1643 aa11.08□□□□□ -0.64
CLK4-214ENST00000611575 E9PCH4 1651 aa11.08□□□□□ -0.64
CLK4-214ENST00000611575 MYO5BQ9ULV0 1848 aa11.07□□□□□ -0.64
CLK4-214ENST00000611575 IQGAP3Q86VI3 1631 aa11.07□□□□□ -0.64
CLK4-214ENST00000611575 TRPM2O94759 1503 aa11.07□□□□□ -0.64
CLK4-214ENST00000611575 ASXL1Q8IXJ9 1541 aa11.07□□□□□ -0.64
CLK4-214ENST00000611575 MST1RQ04912 1400 aa11.07□□□□□ -0.64
CLK4-214ENST00000611575 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
CLK4-214ENST00000611575 NHSL1Q5SYE7 1610 aa11.05□□□□□ -0.64
CLK4-214ENST00000611575 PPP1R15AO75807 674 aaPredicted RBP11.04□□□□□ -0.64
CLK4-214ENST00000611575 LAMC1P11047 1609 aa11.04□□□□□ -0.64
CLK4-214ENST00000611575 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
CLK4-214ENST00000611575 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
CLK4-214ENST00000611575 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
CLK4-214ENST00000611575 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
CLK4-214ENST00000611575 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
CLK4-214ENST00000611575 AMOTL2Q9Y2J4 779 aa11.03□□□□□ -0.64
CLK4-214ENST00000611575 ATF3P18847 181 aa11.02□□□□□ -0.65
CLK4-214ENST00000611575 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
CLK4-214ENST00000611575 METP08581 1390 aa11.02□□□□□ -0.65
CLK4-214ENST00000611575 RGS12O14924 1447 aa11.01□□□□□ -0.65
CLK4-214ENST00000611575 ADGRL3Q9HAR2 1447 aa11.01□□□□□ -0.65
CLK4-214ENST00000611575 RXRBP28702 533 aa11.01□□□□□ -0.65
CLK4-214ENST00000611575 DCAF8Q5TAQ9 597 aa11.01□□□□□ -0.65
CLK4-214ENST00000611575 BCANQ96GW7 911 aa11.01□□□□□ -0.65
CLK4-214ENST00000611575 PNPLA6Q8IY17 1366 aa11.01□□□□□ -0.65
CLK4-214ENST00000611575 EP400Q96L91 3159 aa11□□□□□ -0.65
CLK4-214ENST00000611575 FAM212AQ96EL1 285 aa11□□□□□ -0.65
CLK4-214ENST00000611575 NUTM2DQ5VT03 806 aaPredicted RBP10.99□□□□□ -0.65
CLK4-214ENST00000611575 AFF2P51816 1311 aa10.99□□□□□ -0.65
CLK4-214ENST00000611575 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
CLK4-214ENST00000611575 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
CLK4-214ENST00000611575 FAM50AQ14320 339 aaKnown RBP10.98□□□□□ -0.65
CLK4-214ENST00000611575 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
CLK4-214ENST00000611575 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
CLK4-214ENST00000611575 LRRC59Q96AG4 307 aaKnown RBP10.98□□□□□ -0.65
CLK4-214ENST00000611575 NUP155O75694 1391 aa10.98□□□□□ -0.65
CLK4-214ENST00000611575 PTCH1Q13635 1447 aa10.98□□□□□ -0.65
CLK4-214ENST00000611575 MEX3CQ5U5Q3 659 aaKnown RBP10.97□□□□□ -0.65
CLK4-214ENST00000611575 C14orf37Q86TY3 774 aa10.97□□□□□ -0.65
CLK4-214ENST00000611575 C1orf167Q5SNV9 1468 aa10.97□□□□□ -0.65
CLK4-214ENST00000611575 NALCNQ8IZF0 1738 aa10.96□□□□□ -0.65
CLK4-214ENST00000611575 SOS2Q07890 1332 aaPredicted RBP10.96□□□□□ -0.65
CLK4-214ENST00000611575 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.65
CLK4-214ENST00000611575 RBM6P78332 1123 aaKnown RBP10.96□□□□□ -0.65
CLK4-214ENST00000611575 PAXIP1Q6ZW49 1069 aaPredicted RBP10.96□□□□□ -0.65
CLK4-214ENST00000611575 HS6ST3Q8IZP7 471 aa10.96□□□□□ -0.65
CLK4-214ENST00000611575 KIF12Q96FN5 646 aa10.96□□□□□ -0.65
CLK4-214ENST00000611575 FNBP4Q8N3X1 1017 aaPredicted RBP10.94□□□□□ -0.66
CLK4-214ENST00000611575 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
CLK4-214ENST00000611575 COL22A1Q8NFW1 1626 aaPredicted RBP10.94□□□□□ -0.66
CLK4-214ENST00000611575 RIOK3O14730 519 aaKnown RBP10.93□□□□□ -0.66
CLK4-214ENST00000611575 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
CLK4-214ENST00000611575 DDX17Q92841 729 aaKnown RBP10.93□□□□□ -0.66
CLK4-214ENST00000611575 CLTCL1P53675 1640 aa10.93□□□□□ -0.66
CLK4-214ENST00000611575 MYOM2P54296 1465 aa10.93□□□□□ -0.66
CLK4-214ENST00000611575 ATRNO75882 1429 aa10.92□□□□□ -0.66
CLK4-214ENST00000611575 ROBO2Q9HCK4 1378 aa10.92□□□□□ -0.66
CLK4-214ENST00000611575 NUTM2BA6NNL0 878 aaPredicted RBP10.92□□□□□ -0.66
CLK4-214ENST00000611575 NUTM2EB1AL46 878 aaPredicted RBP10.92□□□□□ -0.66
CLK4-214ENST00000611575 NUTM2AQ8IVF1 878 aaPredicted RBP10.92□□□□□ -0.66
CLK4-214ENST00000611575 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
CLK4-214ENST00000611575 QTRT2Q9H974 415 aaKnown RBP10.92□□□□□ -0.66
CLK4-214ENST00000611575 MAP3K13O43283 966 aa10.91□□□□□ -0.66
CLK4-214ENST00000611575 SPRYD3Q8NCJ5 442 aa10.91□□□□□ -0.66
CLK4-214ENST00000611575 TRPC6Q9Y210 931 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms