RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 MYO5BQ9ULV0 1848 aa15.73■□□□□ 0.11
SRRT-213ENST00000611405 GOLGA2Q08379 1002 aa15.73■□□□□ 0.11
SRRT-213ENST00000611405 CGNL1Q0VF96 1302 aa15.73■□□□□ 0.11
SRRT-213ENST00000611405 ANKRD36BQ8N2N9 1353 aa15.72■□□□□ 0.11
SRRT-213ENST00000611405 RTN4Q9NQC3 1192 aaKnown RBP15.72■□□□□ 0.11
SRRT-213ENST00000611405 NINLQ9Y2I6 1382 aa15.72■□□□□ 0.11
SRRT-213ENST00000611405 EXOC6Q8TAG9 804 aa15.71■□□□□ 0.11
SRRT-213ENST00000611405 NSD2O96028 1365 aa15.71■□□□□ 0.11
SRRT-213ENST00000611405 DUSP27Q5VZP5 1158 aa15.71■□□□□ 0.1
SRRT-213ENST00000611405 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.1
SRRT-213ENST00000611405 STK26Q9P289 416 aa15.7■□□□□ 0.1
SRRT-213ENST00000611405 CCDC146Q8IYE0 955 aa15.7■□□□□ 0.1
SRRT-213ENST00000611405 YTHDC2Q9H6S0 1430 aaKnown RBP15.69■□□□□ 0.1
SRRT-213ENST00000611405 PTPRMP28827 1452 aa15.69■□□□□ 0.1
SRRT-213ENST00000611405 SPATA31D1Q6ZQQ2 1576 aa15.69■□□□□ 0.1
SRRT-213ENST00000611405 SLFN5Q08AF3 891 aa15.69■□□□□ 0.1
SRRT-213ENST00000611405 CABP2Q9NPB3 220 aa15.69■□□□□ 0.1
SRRT-213ENST00000611405 CLTCQ00610 1675 aaKnown RBP15.69■□□□□ 0.1
SRRT-213ENST00000611405 FANCIQ9NVI1 1328 aa15.69■□□□□ 0.1
SRRT-213ENST00000611405 APAF1O14727 1248 aa15.68■□□□□ 0.1
SRRT-213ENST00000611405 TRMT2AQ8IZ69 625 aaKnown RBP15.67■□□□□ 0.1
SRRT-213ENST00000611405 ALKQ9UM73 1620 aa15.67■□□□□ 0.1
SRRT-213ENST00000611405 ARHGEF40Q8TER5 1519 aa15.67■□□□□ 0.1
SRRT-213ENST00000611405 ATAD2Q6PL18 1390 aa15.67■□□□□ 0.1
SRRT-213ENST00000611405 SAFB2Q14151 953 aaKnown RBP eCLIP15.66■□□□□ 0.1
SRRT-213ENST00000611405 POGKQ9P215 609 aa15.66■□□□□ 0.1
SRRT-213ENST00000611405 A2ML1A8K2U0 1454 aa15.66■□□□□ 0.1
SRRT-213ENST00000611405 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
SRRT-213ENST00000611405 CFAP53Q96M91 514 aa15.65■□□□□ 0.1
SRRT-213ENST00000611405 PRAM1Q96QH2 718 aa15.65■□□□□ 0.1
SRRT-213ENST00000611405 E9PSI1 815 aa15.64■□□□□ 0.09
SRRT-213ENST00000611405 PLIN1O60240 522 aa15.64■□□□□ 0.09
SRRT-213ENST00000611405 TNNT2P45379 298 aaPredicted RBP15.64■□□□□ 0.09
SRRT-213ENST00000611405 RIMS2Q9UQ26 1411 aa15.64■□□□□ 0.09
SRRT-213ENST00000611405 MLECQ14165 292 aa15.63■□□□□ 0.09
SRRT-213ENST00000611405 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.63■□□□□ 0.09
SRRT-213ENST00000611405 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
SRRT-213ENST00000611405 SHPRHQ149N8 1683 aa15.63■□□□□ 0.09
SRRT-213ENST00000611405 MTHFSP49914 203 aa15.63■□□□□ 0.09
SRRT-213ENST00000611405 ABCC11Q96J66 1382 aa15.63■□□□□ 0.09
SRRT-213ENST00000611405 KIF13AQ9H1H9 1805 aa15.63■□□□□ 0.09
SRRT-213ENST00000611405 RUNDC1Q96C34 613 aa15.62■□□□□ 0.09
SRRT-213ENST00000611405 SENP3Q9H4L4 574 aaPredicted RBP15.62■□□□□ 0.09
SRRT-213ENST00000611405 TERF2IPQ9NYB0 399 aa15.62■□□□□ 0.09
SRRT-213ENST00000611405 CRBNQ96SW2 442 aa15.62■□□□□ 0.09
SRRT-213ENST00000611405 A0A1W2PP64 1363 aa15.62■□□□□ 0.09
SRRT-213ENST00000611405 DLC1Q96QB1 1528 aa15.62■□□□□ 0.09
SRRT-213ENST00000611405 ESF1Q9H501 851 aaKnown RBP15.61■□□□□ 0.09
SRRT-213ENST00000611405 NKTRP30414 1462 aaKnown RBP15.61■□□□□ 0.09
SRRT-213ENST00000611405 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.6■□□□□ 0.09
SRRT-213ENST00000611405 ZMYM3Q14202 1370 aa15.59■□□□□ 0.09
SRRT-213ENST00000611405 CDK19Q9BWU1 502 aa15.59■□□□□ 0.09
SRRT-213ENST00000611405 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
SRRT-213ENST00000611405 MED14O60244 1454 aa15.58■□□□□ 0.09
SRRT-213ENST00000611405 WWC1Q8IX03 1113 aa15.58■□□□□ 0.09
SRRT-213ENST00000611405 HDGFL2Q7Z4V5 671 aaPredicted RBP15.58■□□□□ 0.08
SRRT-213ENST00000611405 ANP32EQ9BTT0 268 aa15.57■□□□□ 0.08
SRRT-213ENST00000611405 IQSEC2Q5JU85 1478 aa15.57■□□□□ 0.08
SRRT-213ENST00000611405 CD163L1Q9NR16 1453 aa15.57■□□□□ 0.08
SRRT-213ENST00000611405 TCERG1O14776 1098 aaKnown RBP15.57■□□□□ 0.08
SRRT-213ENST00000611405 HDGFP51858 240 aaKnown RBP15.56■□□□□ 0.08
SRRT-213ENST00000611405 C20orf194Q5TEA3 1177 aa15.56■□□□□ 0.08
SRRT-213ENST00000611405 TCP11L2Q8N4U5 519 aa15.56■□□□□ 0.08
SRRT-213ENST00000611405 CCDC27Q2M243 656 aa15.55■□□□□ 0.08
SRRT-213ENST00000611405 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
SRRT-213ENST00000611405 SETD1AO15047 1707 aaKnown RBP15.55■□□□□ 0.08
SRRT-213ENST00000611405 WDR63Q8IWG1 891 aa15.55■□□□□ 0.08
SRRT-213ENST00000611405 FYB1O15117 783 aa15.54■□□□□ 0.08
SRRT-213ENST00000611405 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
SRRT-213ENST00000611405 GGNBP2Q9H3C7 697 aa15.54■□□□□ 0.08
SRRT-213ENST00000611405 MSH5O43196 834 aa15.54■□□□□ 0.08
SRRT-213ENST00000611405 NLRP1Q9C000 1473 aa15.53■□□□□ 0.08
SRRT-213ENST00000611405 CABP1Q9NZU7 370 aa15.53■□□□□ 0.08
SRRT-213ENST00000611405 ANKRD26Q9UPS8 1709 aa15.53■□□□□ 0.08
SRRT-213ENST00000611405 TNRQ92752 1358 aa15.53■□□□□ 0.08
SRRT-213ENST00000611405 U2AF1L5P0DN76 240 aaPredicted RBP15.53■□□□□ 0.08
SRRT-213ENST00000611405 U2AF1Q01081 240 aaKnown RBP eCLIP15.53■□□□□ 0.087e-7■■■□□ 19.2
SRRT-213ENST00000611405 MS4A1P11836 297 aa15.52■□□□□ 0.08
SRRT-213ENST00000611405 WAPLQ7Z5K2 1190 aa15.52■□□□□ 0.08
SRRT-213ENST00000611405 SIRT1Q96EB6 747 aa15.52■□□□□ 0.07
SRRT-213ENST00000611405 ATP7BP35670 1465 aa15.52■□□□□ 0.07
SRRT-213ENST00000611405 NRXN3Q9Y4C0 1643 aa15.51■□□□□ 0.07
SRRT-213ENST00000611405 RRP7AQ9Y3A4 280 aaKnown RBP15.51■□□□□ 0.07
SRRT-213ENST00000611405 NEUROD2Q15784 382 aa15.5■□□□□ 0.07
SRRT-213ENST00000611405 COL3A1P02461 1466 aaPredicted RBP15.5■□□□□ 0.07
SRRT-213ENST00000611405 BCAR3O75815 825 aa15.49■□□□□ 0.07
SRRT-213ENST00000611405 METP08581 1390 aa15.49■□□□□ 0.07
SRRT-213ENST00000611405 FAM135BQ49AJ0 1406 aa15.49■□□□□ 0.07
SRRT-213ENST00000611405 ADGRB2O60241 1585 aa15.48■□□□□ 0.07
SRRT-213ENST00000611405 CENPQQ7L2Z9 268 aaPredicted RBP15.48■□□□□ 0.07
SRRT-213ENST00000611405 KDM2BQ8NHM5 1336 aa15.48■□□□□ 0.07
SRRT-213ENST00000611405 WASLO00401 505 aaPredicted RBP15.48■□□□□ 0.07
SRRT-213ENST00000611405 PDE3AQ14432 1141 aa15.48■□□□□ 0.07
SRRT-213ENST00000611405 TECPR2O15040 1411 aa15.48■□□□□ 0.07
SRRT-213ENST00000611405 TMEM2Q9UHN6 1383 aa15.47■□□□□ 0.07
SRRT-213ENST00000611405 PNPLA6Q8IY17 1366 aa15.47■□□□□ 0.07
SRRT-213ENST00000611405 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
SRRT-213ENST00000611405 MYH16Q9H6N6 1097 aa15.47■□□□□ 0.07
SRRT-213ENST00000611405 KNDC1Q76NI1 1749 aa15.46■□□□□ 0.07
SRRT-213ENST00000611405 U2SURPO15042 1029 aaKnown RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms