RNA–Protein interactions for RNA: ENST00000610509.1

NPRL3-210, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 2

Gene NPRL3, Length 2,917 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-210ENST00000610509 DDIT3P35638 169 aa16.78■□□□□ 0.28
NPRL3-210ENST00000610509 MVPQ14764 893 aaKnown RBP16.77■□□□□ 0.28
NPRL3-210ENST00000610509 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
NPRL3-210ENST00000610509 IQGAP3Q86VI3 1631 aa16.76■□□□□ 0.27
NPRL3-210ENST00000610509 KIAA1211Q6ZU35 1233 aa16.76■□□□□ 0.27
NPRL3-210ENST00000610509 CDC42BPBQ9Y5S2 1711 aa16.75■□□□□ 0.27
NPRL3-210ENST00000610509 FTSJ3Q8IY81 847 aaKnown RBP16.75■□□□□ 0.27
NPRL3-210ENST00000610509 ATP10AO60312 1499 aa16.75■□□□□ 0.27
NPRL3-210ENST00000610509 NCOA3Q9Y6Q9 1424 aa16.74■□□□□ 0.27
NPRL3-210ENST00000610509 AAMPQ13685 434 aa16.74■□□□□ 0.27
NPRL3-210ENST00000610509 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
NPRL3-210ENST00000610509 CD2BP2O95400 341 aaKnown RBP16.73■□□□□ 0.27
NPRL3-210ENST00000610509 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
NPRL3-210ENST00000610509 POLR3AO14802 1390 aaPredicted RBP16.73■□□□□ 0.27
NPRL3-210ENST00000610509 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
NPRL3-210ENST00000610509 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
NPRL3-210ENST00000610509 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
NPRL3-210ENST00000610509 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
NPRL3-210ENST00000610509 TPM2P07951 284 aa16.72■□□□□ 0.27
NPRL3-210ENST00000610509 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
NPRL3-210ENST00000610509 RBM10P98175 930 aaKnown RBP16.71■□□□□ 0.27
NPRL3-210ENST00000610509 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
NPRL3-210ENST00000610509 ERVK-7P63135 1459 aa16.71■□□□□ 0.27
NPRL3-210ENST00000610509 SCAPERQ9BY12 1400 aa16.7■□□□□ 0.26
NPRL3-210ENST00000610509 CFAP70Q5T0N1 1121 aa16.7■□□□□ 0.26
NPRL3-210ENST00000610509 PREX2Q70Z35 1606 aa16.7■□□□□ 0.26
NPRL3-210ENST00000610509 RAB3GAP1Q15042 981 aa16.7■□□□□ 0.26
NPRL3-210ENST00000610509 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
NPRL3-210ENST00000610509 KDM5AP29375 1690 aaKnown RBP16.7■□□□□ 0.26
NPRL3-210ENST00000610509 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
NPRL3-210ENST00000610509 CEP152O94986 1710 aa16.7■□□□□ 0.26
NPRL3-210ENST00000610509 MORC1Q86VD1 984 aa16.69■□□□□ 0.26
NPRL3-210ENST00000610509 SMC5Q8IY18 1101 aa16.69■□□□□ 0.26
NPRL3-210ENST00000610509 GBP4Q96PP9 640 aa16.69■□□□□ 0.26
NPRL3-210ENST00000610509 TRIM27P14373 513 aa16.69■□□□□ 0.26
NPRL3-210ENST00000610509 PDCL3Q9H2J4 239 aa16.69■□□□□ 0.26
NPRL3-210ENST00000610509 ARHGAP5Q13017 1502 aa16.69■□□□□ 0.26
NPRL3-210ENST00000610509 MAST1Q9Y2H9 1570 aa16.69■□□□□ 0.26
NPRL3-210ENST00000610509 WDR63Q8IWG1 891 aa16.69■□□□□ 0.26
NPRL3-210ENST00000610509 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
NPRL3-210ENST00000610509 NASPP49321 788 aaPredicted RBP16.68■□□□□ 0.26
NPRL3-210ENST00000610509 RBM25P49756 843 aaKnown RBP16.68■□□□□ 0.26
NPRL3-210ENST00000610509 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
NPRL3-210ENST00000610509 SMC4Q9NTJ3 1288 aa16.68■□□□□ 0.26
NPRL3-210ENST00000610509 SHPRHQ149N8 1683 aa16.68■□□□□ 0.26
NPRL3-210ENST00000610509 SSFA2P28290 1259 aa16.67■□□□□ 0.26
NPRL3-210ENST00000610509 RIPK4P57078 832 aa16.67■□□□□ 0.26
NPRL3-210ENST00000610509 SNX21Q969T3 373 aa16.67■□□□□ 0.26
NPRL3-210ENST00000610509 KIF2CQ99661 725 aa16.66■□□□□ 0.26
NPRL3-210ENST00000610509 HDAC1Q13547 482 aaPredicted RBP16.66■□□□□ 0.26
NPRL3-210ENST00000610509 NSD3Q9BZ95 1437 aa16.66■□□□□ 0.26
NPRL3-210ENST00000610509 MTHFSP49914 203 aa16.66■□□□□ 0.26
NPRL3-210ENST00000610509 ZSCAN30Q86W11 494 aa16.66■□□□□ 0.26
NPRL3-210ENST00000610509 TTC37Q6PGP7 1564 aa16.65■□□□□ 0.26
NPRL3-210ENST00000610509 CCDC173Q0VFZ6 552 aa16.65■□□□□ 0.26
NPRL3-210ENST00000610509 EXOSC9Q06265 439 aaKnown RBP16.64■□□□□ 0.25
NPRL3-210ENST00000610509 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
NPRL3-210ENST00000610509 PPP1R9BQ96SB3 815 aa16.64■□□□□ 0.25
NPRL3-210ENST00000610509 SLC12A5Q9H2X9 1139 aa16.64■□□□□ 0.25
NPRL3-210ENST00000610509 CIZ1Q9ULV3 898 aaPredicted RBP16.64■□□□□ 0.25
NPRL3-210ENST00000610509 SPHKAPQ2M3C7 1700 aa16.64■□□□□ 0.25
NPRL3-210ENST00000610509 ARID3AQ99856 593 aa16.63■□□□□ 0.25
NPRL3-210ENST00000610509 DUOX2Q9NRD8 1548 aa16.63■□□□□ 0.25
NPRL3-210ENST00000610509 OFD1O75665 1012 aa16.63■□□□□ 0.25
NPRL3-210ENST00000610509 SKOR2Q2VWA4 1001 aaPredicted RBP16.63■□□□□ 0.25
NPRL3-210ENST00000610509 TMEM57Q8N5G2 664 aa16.63■□□□□ 0.25
NPRL3-210ENST00000610509 GAS2L2Q8NHY3 880 aa16.63■□□□□ 0.25
NPRL3-210ENST00000610509 CHD1O14646 1710 aa16.63■□□□□ 0.25
NPRL3-210ENST00000610509 FAM13BQ9NYF5 915 aa16.62■□□□□ 0.25
NPRL3-210ENST00000610509 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
NPRL3-210ENST00000610509 ADGRF5Q8IZF2 1346 aa16.62■□□□□ 0.25
NPRL3-210ENST00000610509 U2AF1L5P0DN76 240 aaPredicted RBP16.62■□□□□ 0.25
NPRL3-210ENST00000610509 U2AF1Q01081 240 aaKnown RBP eCLIP16.62■□□□□ 0.25
NPRL3-210ENST00000610509 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
NPRL3-210ENST00000610509 MSNP26038 577 aaKnown RBP16.61■□□□□ 0.25
NPRL3-210ENST00000610509 NOB1Q9ULX3 412 aaKnown RBP16.61■□□□□ 0.25
NPRL3-210ENST00000610509 R3HCC1Q9Y3T6 440 aaKnown RBP16.61■□□□□ 0.25
NPRL3-210ENST00000610509 ATF7IPQ6VMQ6 1270 aa16.61■□□□□ 0.25
NPRL3-210ENST00000610509 CCDC27Q2M243 656 aa16.6■□□□□ 0.25
NPRL3-210ENST00000610509 CLTCL1P53675 1640 aa16.6■□□□□ 0.25
NPRL3-210ENST00000610509 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
NPRL3-210ENST00000610509 KANK1Q14678 1352 aa16.6■□□□□ 0.25
NPRL3-210ENST00000610509 K7ELQ4 463 aaPredicted RBP16.59■□□□□ 0.25
NPRL3-210ENST00000610509 NUCB1Q02818 461 aa16.59■□□□□ 0.25
NPRL3-210ENST00000610509 ZBTB40Q9NUA8 1239 aa16.59■□□□□ 0.25
NPRL3-210ENST00000610509 XPCQ01831 940 aaPredicted RBP16.59■□□□□ 0.25
NPRL3-210ENST00000610509 TRPM2O94759 1503 aa16.58■□□□□ 0.25
NPRL3-210ENST00000610509 BAG4O95429 457 aaKnown RBP16.58■□□□□ 0.24
NPRL3-210ENST00000610509 KLHL40Q2TBA0 621 aa16.58■□□□□ 0.24
NPRL3-210ENST00000610509 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.58■□□□□ 0.24
NPRL3-210ENST00000610509 ANP32BQ92688 251 aaKnown RBP16.58■□□□□ 0.24
NPRL3-210ENST00000610509 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
NPRL3-210ENST00000610509 PTPRTO14522 1441 aa16.57■□□□□ 0.24
NPRL3-210ENST00000610509 ZNF518AQ6AHZ1 1483 aa16.57■□□□□ 0.24
NPRL3-210ENST00000610509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.57■□□□□ 0.24
NPRL3-210ENST00000610509 ERCC6L2Q5T890 1561 aa16.57■□□□□ 0.24
NPRL3-210ENST00000610509 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
NPRL3-210ENST00000610509 CAVIN1Q6NZI2 390 aaKnown RBP16.57■□□□□ 0.24
NPRL3-210ENST00000610509 PRDM4Q9UKN5 801 aa16.57■□□□□ 0.24
NPRL3-210ENST00000610509 AK9Q5TCS8 1911 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms