RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 IQGAP3Q86VI3 1631 aa10.91□□□□□ -0.66
MUC1-221ENST00000610359 SLIT2O94813 1529 aa10.9□□□□□ -0.66
MUC1-221ENST00000610359 SF3B2Q13435 895 aaKnown RBP10.9□□□□□ -0.66
MUC1-221ENST00000610359 ADGRL2O95490 1459 aa10.89□□□□□ -0.67
MUC1-221ENST00000610359 PXDNQ92626 1479 aa10.89□□□□□ -0.67
MUC1-221ENST00000610359 UNC5CLQ8IV45 518 aa10.89□□□□□ -0.67
MUC1-221ENST00000610359 MSH5O43196 834 aa10.88□□□□□ -0.67
MUC1-221ENST00000610359 SEPT12Q8IYM1 358 aa10.88□□□□□ -0.67
MUC1-221ENST00000610359 RGPD1P0DJD0 1748 aa10.87□□□□□ -0.67
MUC1-221ENST00000610359 VPS8Q8N3P4 1428 aa10.87□□□□□ -0.67
MUC1-221ENST00000610359 ANKRD50Q9ULJ7 1429 aa10.87□□□□□ -0.67
MUC1-221ENST00000610359 PLCH1Q4KWH8 1693 aa10.86□□□□□ -0.67
MUC1-221ENST00000610359 R3HDM1Q15032 1099 aaKnown RBP10.86□□□□□ -0.67
MUC1-221ENST00000610359 TNS1Q9HBL0 1735 aaKnown RBP10.86□□□□□ -0.67
MUC1-221ENST00000610359 USP32Q8NFA0 1604 aa10.85□□□□□ -0.67
MUC1-221ENST00000610359 NWD2Q9ULI1 1742 aa10.85□□□□□ -0.67
MUC1-221ENST00000610359 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
MUC1-221ENST00000610359 BAG6P46379 1132 aa10.84□□□□□ -0.67
MUC1-221ENST00000610359 XPCQ01831 940 aaPredicted RBP10.84□□□□□ -0.67
MUC1-221ENST00000610359 EN1Q05925 392 aaPredicted RBP10.84□□□□□ -0.67
MUC1-221ENST00000610359 KRT27Q7Z3Y8 459 aa10.84□□□□□ -0.67
MUC1-221ENST00000610359 ROBO2Q9HCK4 1378 aa10.84□□□□□ -0.67
MUC1-221ENST00000610359 IFFO2Q5TF58 517 aa10.83□□□□□ -0.68
MUC1-221ENST00000610359 NEXMIFQ5QGS0 1516 aa10.83□□□□□ -0.68
MUC1-221ENST00000610359 NPHP3Q7Z494 1330 aa10.83□□□□□ -0.68
MUC1-221ENST00000610359 VPS72Q15906 364 aa10.82□□□□□ -0.68
MUC1-221ENST00000610359 CAMTA1Q9Y6Y1 1673 aa10.82□□□□□ -0.68
MUC1-221ENST00000610359 ABCA3Q99758 1704 aa10.81□□□□□ -0.68
MUC1-221ENST00000610359 FOXO3O43524 673 aa10.81□□□□□ -0.68
MUC1-221ENST00000610359 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
MUC1-221ENST00000610359 CDC42BPGQ6DT37 1551 aa10.8□□□□□ -0.68
MUC1-221ENST00000610359 NRAPQ86VF7 1730 aa10.8□□□□□ -0.68
MUC1-221ENST00000610359 RGPD8O14715 1765 aaPredicted RBP10.8□□□□□ -0.68
MUC1-221ENST00000610359 DISP2A7MBM2 1401 aa10.79□□□□□ -0.68
MUC1-221ENST00000610359 PRAG1Q86YV5 1406 aa10.79□□□□□ -0.68
MUC1-221ENST00000610359 ZNF326Q5BKZ1 582 aaKnown RBP10.79□□□□□ -0.68
MUC1-221ENST00000610359 KIF1BO60333 1816 aa10.79□□□□□ -0.68
MUC1-221ENST00000610359 EZH2Q15910 746 aaKnown RBP10.78□□□□□ -0.68
MUC1-221ENST00000610359 FAM182BQ5T319 152 aa10.78□□□□□ -0.68
MUC1-221ENST00000610359 RREB1Q92766 1687 aa10.78□□□□□ -0.68
MUC1-221ENST00000610359 SPATA31A3Q5VYP0 1347 aa10.78□□□□□ -0.68
MUC1-221ENST00000610359 CLTCL1P53675 1640 aa10.77□□□□□ -0.68
MUC1-221ENST00000610359 CCDC9Q9Y3X0 531 aaKnown RBP10.77□□□□□ -0.69
MUC1-221ENST00000610359 UTRNP46939 3433 aa10.77□□□□□ -0.69
MUC1-221ENST00000610359 NUP188Q5SRE5 1749 aa10.77□□□□□ -0.69
MUC1-221ENST00000610359 HFM1A2PYH4 1435 aa10.76□□□□□ -0.69
MUC1-221ENST00000610359 CHD4Q14839 1912 aa10.76□□□□□ -0.69
MUC1-221ENST00000610359 CABLES1Q8TDN4 633 aa10.76□□□□□ -0.69
MUC1-221ENST00000610359 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
MUC1-221ENST00000610359 CAMKK2Q96RR4 588 aa10.75□□□□□ -0.69
MUC1-221ENST00000610359 KIF1AQ12756 1690 aa10.75□□□□□ -0.69
MUC1-221ENST00000610359 THSD7AQ9UPZ6 1657 aa10.75□□□□□ -0.69
MUC1-221ENST00000610359 FMN2Q9NZ56 1722 aa10.75□□□□□ -0.69
MUC1-221ENST00000610359 SENP3-EIF4A1A0A087X0R7 540 aa10.74□□□□□ -0.69
MUC1-221ENST00000610359 NUTM2FA1L443 756 aa10.74□□□□□ -0.69
MUC1-221ENST00000610359 LRPPRCP42704 1394 aaKnown RBP10.74□□□□□ -0.69
MUC1-221ENST00000610359 A0A0G2JS52 829 aa10.73□□□□□ -0.69
MUC1-221ENST00000610359 FAM83GA6ND36 823 aa10.73□□□□□ -0.69
MUC1-221ENST00000610359 MYT1Q01538 1121 aa10.73□□□□□ -0.69
MUC1-221ENST00000610359 ZNF784Q8NCA9 323 aaPredicted RBP10.73□□□□□ -0.69
MUC1-221ENST00000610359 NUP155O75694 1391 aa10.73□□□□□ -0.69
MUC1-221ENST00000610359 NAIPQ13075 1403 aa10.73□□□□□ -0.69
MUC1-221ENST00000610359 PPLO60437 1756 aa10.72□□□□□ -0.69
MUC1-221ENST00000610359 ADGRB2O60241 1585 aa10.72□□□□□ -0.69
MUC1-221ENST00000610359 CCDC144AA2RUR9 1427 aa10.71□□□□□ -0.69
MUC1-221ENST00000610359 PLEKHG5O94827 1062 aa10.71□□□□□ -0.69
MUC1-221ENST00000610359 FAM50AQ14320 339 aaKnown RBP10.71□□□□□ -0.69
MUC1-221ENST00000610359 KRT28Q7Z3Y7 464 aa10.71□□□□□ -0.69
MUC1-221ENST00000610359 IFT172Q9UG01 1749 aa10.7□□□□□ -0.7
MUC1-221ENST00000610359 TNS3Q68CZ2 1445 aa10.7□□□□□ -0.7
MUC1-221ENST00000610359 NINLQ9Y2I6 1382 aa10.7□□□□□ -0.7
MUC1-221ENST00000610359 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
MUC1-221ENST00000610359 CEP350Q5VT06 3117 aa10.7□□□□□ -0.7
MUC1-221ENST00000610359 COL14A1Q05707 1796 aaKnown RBP10.7□□□□□ -0.7
MUC1-221ENST00000610359 TRIM37O94972 964 aa10.69□□□□□ -0.7
MUC1-221ENST00000610359 C1QTNF8P60827 252 aa10.68□□□□□ -0.7
MUC1-221ENST00000610359 WAPLQ7Z5K2 1190 aa10.68□□□□□ -0.7
MUC1-221ENST00000610359 SPON1Q9HCB6 807 aa10.68□□□□□ -0.7
MUC1-221ENST00000610359 PPP1R1BQ9UD71 204 aaPredicted RBP10.68□□□□□ -0.7
MUC1-221ENST00000610359 KNDC1Q76NI1 1749 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 PARD3Q8TEW0 1356 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 SPATA31A5Q5VU36 1347 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 SPATA31A7Q8IWB4 1347 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 KCNQ2O43526 872 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 APBA3O96018 575 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 CASZ1Q86V15 1759 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 CRYBG1Q9Y4K1 1723 aa10.67□□□□□ -0.7
MUC1-221ENST00000610359 ROCK1Q13464 1354 aa10.66□□□□□ -0.7
MUC1-221ENST00000610359 PLEKHH1Q9ULM0 1364 aa10.66□□□□□ -0.7
MUC1-221ENST00000610359 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
MUC1-221ENST00000610359 TRPM3Q9HCF6 1732 aaPredicted RBP10.66□□□□□ -0.7
MUC1-221ENST00000610359 SBNO1A3KN83 1393 aa10.65□□□□□ -0.7
MUC1-221ENST00000610359 NRKQ7Z2Y5 1582 aa10.65□□□□□ -0.7
MUC1-221ENST00000610359 MYOM1P52179 1685 aa10.65□□□□□ -0.7
MUC1-221ENST00000610359 ALS2Q96Q42 1657 aa10.65□□□□□ -0.7
MUC1-221ENST00000610359 TECPR2O15040 1411 aa10.65□□□□□ -0.7
MUC1-221ENST00000610359 NRXN1Q9ULB1 1477 aa10.64□□□□□ -0.71
MUC1-221ENST00000610359 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms