RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
LINC01396-201ENST00000609099 AMOTL2Q9Y2J4 779 aa13.15□□□□□ -0.3
LINC01396-201ENST00000609099 C1orf167Q5SNV9 1468 aa13.15□□□□□ -0.3
LINC01396-201ENST00000609099 SOS2Q07890 1332 aaPredicted RBP13.14□□□□□ -0.31
LINC01396-201ENST00000609099 ADGRL3Q9HAR2 1447 aa13.14□□□□□ -0.31
LINC01396-201ENST00000609099 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
LINC01396-201ENST00000609099 KCNA4P22459 653 aa13.14□□□□□ -0.31
LINC01396-201ENST00000609099 HDGFP51858 240 aaKnown RBP13.13□□□□□ -0.31
LINC01396-201ENST00000609099 METP08581 1390 aa13.12□□□□□ -0.31
LINC01396-201ENST00000609099 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
LINC01396-201ENST00000609099 SLC52A1Q9NWF4 448 aa13.11□□□□□ -0.31
LINC01396-201ENST00000609099 SLIT2O94813 1529 aa13.11□□□□□ -0.31
LINC01396-201ENST00000609099 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
LINC01396-201ENST00000609099 PXDNQ92626 1479 aa13.1□□□□□ -0.31
LINC01396-201ENST00000609099 E9PCH4 1651 aa13.1□□□□□ -0.31
LINC01396-201ENST00000609099 PPP1R15AO75807 674 aaPredicted RBP13.1□□□□□ -0.31
LINC01396-201ENST00000609099 KANK4Q5T7N3 995 aaPredicted RBP13.1□□□□□ -0.31
LINC01396-201ENST00000609099 GJD4Q96KN9 370 aaPredicted RBP13.1□□□□□ -0.31
LINC01396-201ENST00000609099 ORAI2Q96SN7 254 aa13.1□□□□□ -0.31
LINC01396-201ENST00000609099 RPRD2Q5VT52 1461 aaKnown RBP13.1□□□□□ -0.31
LINC01396-201ENST00000609099 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
LINC01396-201ENST00000609099 DAPK1P53355 1430 aa13.08□□□□□ -0.32
LINC01396-201ENST00000609099 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.32
LINC01396-201ENST00000609099 KANK1Q14678 1352 aa13.06□□□□□ -0.32
LINC01396-201ENST00000609099 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
LINC01396-201ENST00000609099 BAG6P46379 1132 aa13.05□□□□□ -0.32
LINC01396-201ENST00000609099 APLP2Q06481 763 aa13.04□□□□□ -0.32
LINC01396-201ENST00000609099 PLCH1Q4KWH8 1693 aa13.03□□□□□ -0.32
LINC01396-201ENST00000609099 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.32
LINC01396-201ENST00000609099 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
LINC01396-201ENST00000609099 R3HDM1Q15032 1099 aaKnown RBP13.02□□□□□ -0.33
LINC01396-201ENST00000609099 SEPT12Q8IYM1 358 aa13.01□□□□□ -0.33
LINC01396-201ENST00000609099 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
LINC01396-201ENST00000609099 ROBO2Q9HCK4 1378 aa13.01□□□□□ -0.33
LINC01396-201ENST00000609099 ABCA3Q99758 1704 aa13.01□□□□□ -0.33
LINC01396-201ENST00000609099 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
LINC01396-201ENST00000609099 ADGRL2O95490 1459 aa13□□□□□ -0.33
LINC01396-201ENST00000609099 ABCB7O75027 752 aa13□□□□□ -0.33
LINC01396-201ENST00000609099 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
LINC01396-201ENST00000609099 UNC5CLQ8IV45 518 aa12.99□□□□□ -0.33
LINC01396-201ENST00000609099 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC01396-201ENST00000609099 CHIC2Q9UKJ5 165 aa12.99□□□□□ -0.33
LINC01396-201ENST00000609099 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
LINC01396-201ENST00000609099 NEXMIFQ5QGS0 1516 aa12.98□□□□□ -0.33
LINC01396-201ENST00000609099 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
LINC01396-201ENST00000609099 C1QTNF8P60827 252 aa12.98□□□□□ -0.33
LINC01396-201ENST00000609099 XPCQ01831 940 aaPredicted RBP12.98□□□□□ -0.33
LINC01396-201ENST00000609099 EN1Q05925 392 aaPredicted RBP12.98□□□□□ -0.33
LINC01396-201ENST00000609099 RREB1Q92766 1687 aa12.98□□□□□ -0.33
LINC01396-201ENST00000609099 DISP2A7MBM2 1401 aa12.97□□□□□ -0.33
LINC01396-201ENST00000609099 NUP188Q5SRE5 1749 aa12.97□□□□□ -0.33
LINC01396-201ENST00000609099 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.33
LINC01396-201ENST00000609099 CHGAP10645 457 aaKnown RBP12.96□□□□□ -0.33
LINC01396-201ENST00000609099 FAM182BQ5T319 152 aa12.96□□□□□ -0.33
LINC01396-201ENST00000609099 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
LINC01396-201ENST00000609099 NWD2Q9ULI1 1742 aa12.96□□□□□ -0.34
LINC01396-201ENST00000609099 ZNF784Q8NCA9 323 aaPredicted RBP12.95□□□□□ -0.34
LINC01396-201ENST00000609099 THSD7AQ9UPZ6 1657 aa12.94□□□□□ -0.34
LINC01396-201ENST00000609099 KRT27Q7Z3Y8 459 aa12.94□□□□□ -0.34
LINC01396-201ENST00000609099 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
LINC01396-201ENST00000609099 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
LINC01396-201ENST00000609099 VPS72Q15906 364 aa12.92□□□□□ -0.34
LINC01396-201ENST00000609099 EZH2Q15910 746 aaKnown RBP12.92□□□□□ -0.34
LINC01396-201ENST00000609099 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
LINC01396-201ENST00000609099 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.34
LINC01396-201ENST00000609099 CAMKK2Q96RR4 588 aa12.9□□□□□ -0.34
LINC01396-201ENST00000609099 CLTCL1P53675 1640 aa12.89□□□□□ -0.35
LINC01396-201ENST00000609099 FOXO3O43524 673 aa12.88□□□□□ -0.35
LINC01396-201ENST00000609099 CCDC9Q9Y3X0 531 aaKnown RBP12.88□□□□□ -0.35
LINC01396-201ENST00000609099 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
LINC01396-201ENST00000609099 A0A0G2JS52 829 aa12.87□□□□□ -0.35
LINC01396-201ENST00000609099 MYT1Q01538 1121 aa12.87□□□□□ -0.35
LINC01396-201ENST00000609099 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
LINC01396-201ENST00000609099 CABLES1Q8TDN4 633 aa12.87□□□□□ -0.35
LINC01396-201ENST00000609099 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
LINC01396-201ENST00000609099 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
LINC01396-201ENST00000609099 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
LINC01396-201ENST00000609099 NINLQ9Y2I6 1382 aa12.85□□□□□ -0.35
LINC01396-201ENST00000609099 RGPD8O14715 1765 aaPredicted RBP12.85□□□□□ -0.35
LINC01396-201ENST00000609099 NRKQ7Z2Y5 1582 aa12.85□□□□□ -0.35
LINC01396-201ENST00000609099 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
LINC01396-201ENST00000609099 MYOM1P52179 1685 aa12.84□□□□□ -0.35
LINC01396-201ENST00000609099 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
LINC01396-201ENST00000609099 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
LINC01396-201ENST00000609099 NBPF14Q5TI25 921 aa12.84□□□□□ -0.35
LINC01396-201ENST00000609099 CRYBG1Q9Y4K1 1723 aa12.84□□□□□ -0.35
LINC01396-201ENST00000609099 ESCO1Q5FWF5 840 aa12.83□□□□□ -0.36
LINC01396-201ENST00000609099 NAIPQ13075 1403 aa12.82□□□□□ -0.36
LINC01396-201ENST00000609099 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
LINC01396-201ENST00000609099 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
LINC01396-201ENST00000609099 NUTM2FA1L443 756 aa12.81□□□□□ -0.36
LINC01396-201ENST00000609099 KCNQ2O43526 872 aa12.81□□□□□ -0.36
LINC01396-201ENST00000609099 PDGFDQ9GZP0 370 aaPredicted RBP12.81□□□□□ -0.36
LINC01396-201ENST00000609099 ADGRB2O60241 1585 aa12.81□□□□□ -0.36
LINC01396-201ENST00000609099 HFM1A2PYH4 1435 aa12.8□□□□□ -0.36
LINC01396-201ENST00000609099 TNS3Q68CZ2 1445 aa12.8□□□□□ -0.36
LINC01396-201ENST00000609099 GIGYF1O75420 1035 aaPredicted RBP12.8□□□□□ -0.36
LINC01396-201ENST00000609099 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
LINC01396-201ENST00000609099 TRPM3Q9HCF6 1732 aaPredicted RBP12.79□□□□□ -0.36
LINC01396-201ENST00000609099 HAP1P54257 671 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms