RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 DCAF8L1A6NGE4 600 aa14.5□□□□□ -0.09
CTCFL-220ENST00000608858 FOXO3O43524 673 aa14.5□□□□□ -0.09
CTCFL-220ENST00000608858 CROCC2H7BZ55 1655 aa14.49□□□□□ -0.09
CTCFL-220ENST00000608858 PTPN23Q9H3S7 1636 aa14.48□□□□□ -0.09
CTCFL-220ENST00000608858 A0A0G2JS52 829 aa14.48□□□□□ -0.09
CTCFL-220ENST00000608858 HOXD11P31277 338 aaPredicted RBP14.48□□□□□ -0.09
CTCFL-220ENST00000608858 MYT1Q01538 1121 aa14.48□□□□□ -0.09
CTCFL-220ENST00000608858 FAM50AQ14320 339 aaKnown RBP14.48□□□□□ -0.09
CTCFL-220ENST00000608858 FAM182BQ5T319 152 aa14.48□□□□□ -0.09
CTCFL-220ENST00000608858 KRT27Q7Z3Y8 459 aa14.48□□□□□ -0.09
CTCFL-220ENST00000608858 RPRD2Q5VT52 1461 aaKnown RBP14.48□□□□□ -0.09
CTCFL-220ENST00000608858 RALGAPBQ86X10 1494 aa14.48□□□□□ -0.09
CTCFL-220ENST00000608858 LRP5O75197 1615 aa14.48□□□□□ -0.09
CTCFL-220ENST00000608858 BRWD3Q6RI45 1802 aa14.48□□□□□ -0.09
CTCFL-220ENST00000608858 LOC105371045A0A1W2PR82 267 aa14.47□□□□□ -0.09
CTCFL-220ENST00000608858 BAG6P46379 1132 aa14.47□□□□□ -0.09
CTCFL-220ENST00000608858 UNC13BO14795 1591 aa14.47□□□□□ -0.09
CTCFL-220ENST00000608858 RNF216Q9NWF9 866 aaPredicted RBP14.46□□□□□ -0.09
CTCFL-220ENST00000608858 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
CTCFL-220ENST00000608858 GLI3P10071 1580 aa14.44□□□□□ -0.1
CTCFL-220ENST00000608858 ANKRD50Q9ULJ7 1429 aa14.44□□□□□ -0.1
CTCFL-220ENST00000608858 CABLES1Q8TDN4 633 aa14.44□□□□□ -0.1
CTCFL-220ENST00000608858 NALCNQ8IZF0 1738 aa14.44□□□□□ -0.1
CTCFL-220ENST00000608858 NRXN3Q9Y4C0 1643 aa14.42□□□□□ -0.1
CTCFL-220ENST00000608858 HAP1P54257 671 aaPredicted RBP14.42□□□□□ -0.1
CTCFL-220ENST00000608858 APLP2Q06481 763 aa14.42□□□□□ -0.1
CTCFL-220ENST00000608858 MYOM2P54296 1465 aa14.42□□□□□ -0.1
CTCFL-220ENST00000608858 NPHP3Q7Z494 1330 aa14.41□□□□□ -0.1
CTCFL-220ENST00000608858 VPS8Q8N3P4 1428 aa14.41□□□□□ -0.1
CTCFL-220ENST00000608858 EZH2Q15910 746 aaKnown RBP14.41□□□□□ -0.1
CTCFL-220ENST00000608858 ROBO2Q9HCK4 1378 aa14.41□□□□□ -0.1
CTCFL-220ENST00000608858 VPS72Q15906 364 aa14.4□□□□□ -0.1
CTCFL-220ENST00000608858 FAM98CQ17RN3 349 aaKnown RBP14.4□□□□□ -0.1
CTCFL-220ENST00000608858 E9PCH4 1651 aa14.39□□□□□ -0.11
CTCFL-220ENST00000608858 ONECUT3O60422 494 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-220ENST00000608858 COL22A1Q8NFW1 1626 aaPredicted RBP14.38□□□□□ -0.11
CTCFL-220ENST00000608858 LMOD2Q6P5Q4 547 aa14.38□□□□□ -0.11
CTCFL-220ENST00000608858 MARF1Q9Y4F3 1742 aaKnown RBP14.38□□□□□ -0.11
CTCFL-220ENST00000608858 NUP155O75694 1391 aa14.37□□□□□ -0.11
CTCFL-220ENST00000608858 SLIT2O94813 1529 aa14.36□□□□□ -0.11
CTCFL-220ENST00000608858 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
CTCFL-220ENST00000608858 LAMC1P11047 1609 aa14.36□□□□□ -0.11
CTCFL-220ENST00000608858 FAM83GA6ND36 823 aa14.35□□□□□ -0.11
CTCFL-220ENST00000608858 WAPLQ7Z5K2 1190 aa14.35□□□□□ -0.11
CTCFL-220ENST00000608858 PXDNQ92626 1479 aa14.35□□□□□ -0.11
CTCFL-220ENST00000608858 SENP3-EIF4A1A0A087X0R7 540 aa14.34□□□□□ -0.11
CTCFL-220ENST00000608858 ITGAEP38570 1179 aa14.34□□□□□ -0.11
CTCFL-220ENST00000608858 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
CTCFL-220ENST00000608858 STK26Q9P289 416 aa14.34□□□□□ -0.11
CTCFL-220ENST00000608858 PPP1R1BQ9UD71 204 aaPredicted RBP14.34□□□□□ -0.11
CTCFL-220ENST00000608858 SPATA31A3Q5VYP0 1347 aa14.34□□□□□ -0.11
CTCFL-220ENST00000608858 ADGRL2O95490 1459 aa14.32□□□□□ -0.12
CTCFL-220ENST00000608858 TRIM37O94972 964 aa14.32□□□□□ -0.12
CTCFL-220ENST00000608858 CAMKK2Q96RR4 588 aa14.31□□□□□ -0.12
CTCFL-220ENST00000608858 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.3□□□□□ -0.12
CTCFL-220ENST00000608858 APBA3O96018 575 aa14.3□□□□□ -0.12
CTCFL-220ENST00000608858 BTG4Q9NY30 223 aa14.3□□□□□ -0.12
CTCFL-220ENST00000608858 LRPPRCP42704 1394 aaKnown RBP14.3□□□□□ -0.12
CTCFL-220ENST00000608858 VGFO15240 615 aaPredicted RBP14.29□□□□□ -0.12
CTCFL-220ENST00000608858 SPHKAPQ2M3C7 1700 aa14.27□□□□□ -0.12
CTCFL-220ENST00000608858 ZNF784Q8NCA9 323 aaPredicted RBP14.27□□□□□ -0.13
CTCFL-220ENST00000608858 PSME1Q06323 249 aa14.26□□□□□ -0.13
CTCFL-220ENST00000608858 SPON1Q9HCB6 807 aa14.25□□□□□ -0.13
CTCFL-220ENST00000608858 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
CTCFL-220ENST00000608858 HFM1A2PYH4 1435 aa14.24□□□□□ -0.13
CTCFL-220ENST00000608858 KCNQ2O43526 872 aa14.24□□□□□ -0.13
CTCFL-220ENST00000608858 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
CTCFL-220ENST00000608858 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
CTCFL-220ENST00000608858 TMEM132EQ6IEE7 984 aa14.24□□□□□ -0.13
CTCFL-220ENST00000608858 NAIPQ13075 1403 aa14.24□□□□□ -0.13
CTCFL-220ENST00000608858 IQGAP3Q86VI3 1631 aa14.23□□□□□ -0.13
CTCFL-220ENST00000608858 USP32Q8NFA0 1604 aa14.23□□□□□ -0.13
CTCFL-220ENST00000608858 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
CTCFL-220ENST00000608858 C1QTNF8P60827 252 aa14.22□□□□□ -0.13
CTCFL-220ENST00000608858 PMFBP1Q8TBY8 1022 aa14.22□□□□□ -0.13
CTCFL-220ENST00000608858 PHF8Q9UPP1 1060 aa14.22□□□□□ -0.13
CTCFL-220ENST00000608858 PLEKHH1Q9ULM0 1364 aa14.22□□□□□ -0.13
CTCFL-220ENST00000608858 PLCH1Q4KWH8 1693 aa14.2□□□□□ -0.14
CTCFL-220ENST00000608858 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
CTCFL-220ENST00000608858 FAM196AQ6ZSG2 479 aa14.2□□□□□ -0.14
CTCFL-220ENST00000608858 USP35Q9P2H5 1018 aa14.2□□□□□ -0.14
CTCFL-220ENST00000608858 RGPD1P0DJD0 1748 aa14.2□□□□□ -0.14
CTCFL-220ENST00000608858 CAMTA1Q9Y6Y1 1673 aa14.2□□□□□ -0.14
CTCFL-220ENST00000608858 SPATA31A5Q5VU36 1347 aa14.19□□□□□ -0.14
CTCFL-220ENST00000608858 SPATA31A7Q8IWB4 1347 aa14.19□□□□□ -0.14
CTCFL-220ENST00000608858 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
CTCFL-220ENST00000608858 CLTCL1P53675 1640 aa14.18□□□□□ -0.14
CTCFL-220ENST00000608858 CCDC144AA2RUR9 1427 aa14.17□□□□□ -0.14
CTCFL-220ENST00000608858 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
CTCFL-220ENST00000608858 PDGFDQ9GZP0 370 aaPredicted RBP14.17□□□□□ -0.14
CTCFL-220ENST00000608858 TNS3Q68CZ2 1445 aa14.16□□□□□ -0.14
CTCFL-220ENST00000608858 NWD2Q9ULI1 1742 aa14.16□□□□□ -0.14
CTCFL-220ENST00000608858 RGL3Q3MIN7 710 aa14.16□□□□□ -0.14
CTCFL-220ENST00000608858 ADGRF5Q8IZF2 1346 aa14.15□□□□□ -0.14
CTCFL-220ENST00000608858 RGPD8O14715 1765 aaPredicted RBP14.15□□□□□ -0.14
CTCFL-220ENST00000608858 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
CTCFL-220ENST00000608858 PDE3BQ13370 1112 aa14.15□□□□□ -0.14
CTCFL-220ENST00000608858 CHRNA2Q15822 529 aa14.15□□□□□ -0.14
CTCFL-220ENST00000608858 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
CTCFL-220ENST00000608858 TNS1Q9HBL0 1735 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms