RNA–Protein interactions for RNA: ENST00000608490.1

CSNK2A1-207, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-207ENST00000608490 Q3C1V9 767 aa10.66□□□□□ -0.7
CSNK2A1-207ENST00000608490 CYP4X1Q8N118 509 aa10.66□□□□□ -0.7
CSNK2A1-207ENST00000608490 ZBTB24O43167 697 aaPredicted RBP10.65□□□□□ -0.7
CSNK2A1-207ENST00000608490 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
CSNK2A1-207ENST00000608490 MINK1Q8N4C8 1332 aaPredicted RBP10.63□□□□□ -0.71
CSNK2A1-207ENST00000608490 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
CSNK2A1-207ENST00000608490 MMP16P51512 607 aa10.63□□□□□ -0.71
CSNK2A1-207ENST00000608490 USB1Q9BQ65 265 aaKnown RBP10.63□□□□□ -0.71
CSNK2A1-207ENST00000608490 VSIG10Q8N0Z9 540 aa10.62□□□□□ -0.71
CSNK2A1-207ENST00000608490 GUCA2AQ02747 115 aa10.61□□□□□ -0.71
CSNK2A1-207ENST00000608490 TTC24A2A3L6 582 aaPredicted RBP10.6□□□□□ -0.71
CSNK2A1-207ENST00000608490 DXOO77932 396 aaKnown RBP10.6□□□□□ -0.71
CSNK2A1-207ENST00000608490 AVPP01185 164 aa10.6□□□□□ -0.71
CSNK2A1-207ENST00000608490 TRIM32Q13049 653 aa10.6□□□□□ -0.71
CSNK2A1-207ENST00000608490 HOXA2O43364 376 aa10.59□□□□□ -0.71
CSNK2A1-207ENST00000608490 CRIPAKQ8N1N5 446 aa10.59□□□□□ -0.71
CSNK2A1-207ENST00000608490 WNT7AO00755 349 aa10.58□□□□□ -0.72
CSNK2A1-207ENST00000608490 AXIN1O15169 862 aa10.58□□□□□ -0.72
CSNK2A1-207ENST00000608490 USP46P62068 366 aa10.58□□□□□ -0.72
CSNK2A1-207ENST00000608490 CCDC24Q8N4L8 307 aa10.58□□□□□ -0.72
CSNK2A1-207ENST00000608490 SYMPKQ92797 1274 aaKnown RBP10.58□□□□□ -0.72
CSNK2A1-207ENST00000608490 GMPR2Q9P2T1 348 aaKnown RBP10.57□□□□□ -0.72
CSNK2A1-207ENST00000608490 SMPD1P17405 629 aa10.56□□□□□ -0.72
CSNK2A1-207ENST00000608490 MRGPRX2Q96LB1 330 aa10.56□□□□□ -0.72
CSNK2A1-207ENST00000608490 GPCPD1Q9NPB8 672 aa10.56□□□□□ -0.72
CSNK2A1-207ENST00000608490 FAM217BQ9NTX9 383 aaPredicted RBP10.56□□□□□ -0.72
CSNK2A1-207ENST00000608490 CLCN1P35523 988 aa10.55□□□□□ -0.72
CSNK2A1-207ENST00000608490 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
CSNK2A1-207ENST00000608490 J3QL48 77 aa10.54□□□□□ -0.72
CSNK2A1-207ENST00000608490 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
CSNK2A1-207ENST00000608490 CTC1Q2NKJ3 1217 aa10.53□□□□□ -0.72
CSNK2A1-207ENST00000608490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
CSNK2A1-207ENST00000608490 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.73
CSNK2A1-207ENST00000608490 SKOR1P84550 965 aa10.52□□□□□ -0.73
CSNK2A1-207ENST00000608490 NUTM1Q86Y26 1132 aa10.52□□□□□ -0.73
CSNK2A1-207ENST00000608490 KRI1Q8N9T8 703 aaKnown RBP10.52□□□□□ -0.73
CSNK2A1-207ENST00000608490 C11orf95C9JLR9 678 aaPredicted RBP10.51□□□□□ -0.73
CSNK2A1-207ENST00000608490 TREML4Q6UXN2 200 aa10.51□□□□□ -0.73
CSNK2A1-207ENST00000608490 JUNDP17535 347 aa10.5□□□□□ -0.73
CSNK2A1-207ENST00000608490 RC3H1Q5TC82 1133 aaKnown RBP10.5□□□□□ -0.73
CSNK2A1-207ENST00000608490 HPS1Q92902 700 aa10.49□□□□□ -0.73
CSNK2A1-207ENST00000608490 PCDHGC3Q9UN70 934 aa10.49□□□□□ -0.73
CSNK2A1-207ENST00000608490 LCE2AQ5TA79 106 aaPredicted RBP10.48□□□□□ -0.73
CSNK2A1-207ENST00000608490 PTCRAQ6ISU1 281 aaPredicted RBP10.48□□□□□ -0.73
CSNK2A1-207ENST00000608490 FDX1P10109 184 aa10.46□□□□□ -0.73
CSNK2A1-207ENST00000608490 SSTR3P32745 418 aaPredicted RBP10.46□□□□□ -0.73
CSNK2A1-207ENST00000608490 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
CSNK2A1-207ENST00000608490 ATP13A2Q9NQ11 1180 aa10.46□□□□□ -0.73
CSNK2A1-207ENST00000608490 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
CSNK2A1-207ENST00000608490 WNT7BP56706 349 aa10.45□□□□□ -0.74
CSNK2A1-207ENST00000608490 NUDT12Q9BQG2 462 aa10.45□□□□□ -0.74
CSNK2A1-207ENST00000608490 SNRPBP14678 240 aaKnown RBP10.44□□□□□ -0.74
CSNK2A1-207ENST00000608490 NDUFV2P19404 249 aa10.44□□□□□ -0.74
CSNK2A1-207ENST00000608490 SPIRE2Q8WWL2 714 aa10.44□□□□□ -0.74
CSNK2A1-207ENST00000608490 ALDH1A1P00352 501 aa10.42□□□□□ -0.74
CSNK2A1-207ENST00000608490 MOXD2PA6NHM9 499 aa10.41□□□□□ -0.74
CSNK2A1-207ENST00000608490 WFS1O76024 890 aa10.41□□□□□ -0.74
CSNK2A1-207ENST00000608490 TTLL12Q14166 644 aaPredicted RBP10.41□□□□□ -0.74
CSNK2A1-207ENST00000608490 BARGINQ6ZT62 677 aa10.41□□□□□ -0.74
CSNK2A1-207ENST00000608490 MS4A1P11836 297 aa10.4□□□□□ -0.74
CSNK2A1-207ENST00000608490 ZMYND10O75800 440 aa10.39□□□□□ -0.75
CSNK2A1-207ENST00000608490 SIAH2O43255 324 aa10.38□□□□□ -0.75
CSNK2A1-207ENST00000608490 CCNYL3P0C7X3 344 aa10.38□□□□□ -0.75
CSNK2A1-207ENST00000608490 NFX1Q12986 1120 aaKnown RBP10.38□□□□□ -0.75
CSNK2A1-207ENST00000608490 EHBP1Q8NDI1 1231 aa10.38□□□□□ -0.75
CSNK2A1-207ENST00000608490 TRIM47Q96LD4 638 aa10.38□□□□□ -0.75
CSNK2A1-207ENST00000608490 SH3BP2P78314 561 aa10.37□□□□□ -0.75
CSNK2A1-207ENST00000608490 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
CSNK2A1-207ENST00000608490 ZC3H15Q8WU90 426 aaKnown RBP10.37□□□□□ -0.75
CSNK2A1-207ENST00000608490 AMHR2Q16671 573 aa10.36□□□□□ -0.75
CSNK2A1-207ENST00000608490 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
CSNK2A1-207ENST00000608490 PRR7Q8TB68 274 aa10.36□□□□□ -0.75
CSNK2A1-207ENST00000608490 BEGAINQ9BUH8 593 aa10.35□□□□□ -0.75
CSNK2A1-207ENST00000608490 SENP2Q9HC62 589 aa10.35□□□□□ -0.75
CSNK2A1-207ENST00000608490 PTPRNQ16849 979 aa10.34□□□□□ -0.75
CSNK2A1-207ENST00000608490 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
CSNK2A1-207ENST00000608490 BAP1Q92560 729 aa10.34□□□□□ -0.75
CSNK2A1-207ENST00000608490 UNC93B1Q9H1C4 597 aa10.34□□□□□ -0.75
CSNK2A1-207ENST00000608490 EVA1BQ9NVM1 165 aa10.34□□□□□ -0.75
CSNK2A1-207ENST00000608490 BMP1P13497 986 aa10.32□□□□□ -0.76
CSNK2A1-207ENST00000608490 MTMR2Q13614 643 aa10.32□□□□□ -0.76
CSNK2A1-207ENST00000608490 TBC1D2Q9BYX2 928 aa10.32□□□□□ -0.76
CSNK2A1-207ENST00000608490 WASF2Q9Y6W5 498 aa10.32□□□□□ -0.76
CSNK2A1-207ENST00000608490 TERTO14746 1132 aaKnown RBP10.31□□□□□ -0.76
CSNK2A1-207ENST00000608490 KCNH2Q12809 1159 aa10.31□□□□□ -0.76
CSNK2A1-207ENST00000608490 TRIM46Q7Z4K8 759 aa10.3□□□□□ -0.76
CSNK2A1-207ENST00000608490 KIFC2Q96AC6 838 aa10.3□□□□□ -0.76
CSNK2A1-207ENST00000608490 PCDHB15Q9Y5E8 787 aa10.3□□□□□ -0.76
CSNK2A1-207ENST00000608490 TLL2Q9Y6L7 1015 aa10.3□□□□□ -0.76
CSNK2A1-207ENST00000608490 CAPN5O15484 640 aaPredicted RBP10.29□□□□□ -0.76
CSNK2A1-207ENST00000608490 PARP9Q8IXQ6 854 aa10.29□□□□□ -0.76
CSNK2A1-207ENST00000608490 RSBN1LQ6PCB5 846 aaPredicted RBP10.28□□□□□ -0.76
CSNK2A1-207ENST00000608490 SPDYE5A6NIY4 337 aa10.27□□□□□ -0.77
CSNK2A1-207ENST00000608490 CFAP99D6REC4 459 aa10.27□□□□□ -0.77
CSNK2A1-207ENST00000608490 TRIM66O15016 1216 aa10.27□□□□□ -0.77
CSNK2A1-207ENST00000608490 ZNF511Q8NB15 262 aa10.27□□□□□ -0.77
CSNK2A1-207ENST00000608490 WIPF1O43516 503 aa10.26□□□□□ -0.77
CSNK2A1-207ENST00000608490 CTHP32929 405 aa10.26□□□□□ -0.77
CSNK2A1-207ENST00000608490 DESI1Q6ICB0 168 aa10.26□□□□□ -0.77
CSNK2A1-207ENST00000608490 SPTLC1O15269 473 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms