RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 COL22A1Q8NFW1 1626 aaPredicted RBP9.16□□□□□ -0.94
LINC00649-213ENST00000608431 PLEKHG1Q9ULL1 1385 aa9.15□□□□□ -0.94
LINC00649-213ENST00000608431 PPP1R15AO75807 674 aaPredicted RBP9.15□□□□□ -0.94
LINC00649-213ENST00000608431 GJD4Q96KN9 370 aaPredicted RBP9.15□□□□□ -0.94
LINC00649-213ENST00000608431 MTUS2Q5JR59 1369 aa9.14□□□□□ -0.95
LINC00649-213ENST00000608431 PIK3R4Q99570 1358 aa9.14□□□□□ -0.95
LINC00649-213ENST00000608431 HDGFP51858 240 aaKnown RBP9.14□□□□□ -0.95
LINC00649-213ENST00000608431 C1QTNF8P60827 252 aa9.14□□□□□ -0.95
LINC00649-213ENST00000608431 TBX22Q9Y458 520 aa9.14□□□□□ -0.95
LINC00649-213ENST00000608431 IDI1Q13907 227 aa9.13□□□□□ -0.95
LINC00649-213ENST00000608431 EHBP1L1Q8N3D4 1523 aa9.13□□□□□ -0.95
LINC00649-213ENST00000608431 MST1RQ04912 1400 aa9.13□□□□□ -0.95
LINC00649-213ENST00000608431 GLI3P10071 1580 aa9.12□□□□□ -0.95
LINC00649-213ENST00000608431 ZNF784Q8NCA9 323 aaPredicted RBP9.12□□□□□ -0.95
LINC00649-213ENST00000608431 GCC2Q8IWJ2 1684 aa9.12□□□□□ -0.95
LINC00649-213ENST00000608431 RPRD2Q5VT52 1461 aaKnown RBP9.11□□□□□ -0.95
LINC00649-213ENST00000608431 R3HDM1Q15032 1099 aaKnown RBP9.11□□□□□ -0.95
LINC00649-213ENST00000608431 PELP1Q8IZL8 1130 aaKnown RBP9.11□□□□□ -0.95
LINC00649-213ENST00000608431 NALCNQ8IZF0 1738 aa9.11□□□□□ -0.95
LINC00649-213ENST00000608431 TRPM2O94759 1503 aa9.1□□□□□ -0.95
LINC00649-213ENST00000608431 RALGAPBQ86X10 1494 aa9.1□□□□□ -0.95
LINC00649-213ENST00000608431 ZFYVE9O95405 1425 aa9.1□□□□□ -0.95
LINC00649-213ENST00000608431 NINLQ9Y2I6 1382 aa9.1□□□□□ -0.95
LINC00649-213ENST00000608431 DUOX2Q9NRD8 1548 aa9.1□□□□□ -0.95
LINC00649-213ENST00000608431 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
LINC00649-213ENST00000608431 IFNLR1Q8IU57 520 aaPredicted RBP9.09□□□□□ -0.95
LINC00649-213ENST00000608431 KANK1Q14678 1352 aa9.09□□□□□ -0.95
LINC00649-213ENST00000608431 DDX17Q92841 729 aaKnown RBP9.08□□□□□ -0.96
LINC00649-213ENST00000608431 SLC52A1Q9NWF4 448 aa9.08□□□□□ -0.96
LINC00649-213ENST00000608431 PPP1R1BQ9UD71 204 aaPredicted RBP9.08□□□□□ -0.96
LINC00649-213ENST00000608431 XRN1Q8IZH2 1706 aaKnown RBP9.08□□□□□ -0.96
LINC00649-213ENST00000608431 TNS1Q9HBL0 1735 aaKnown RBP9.08□□□□□ -0.96
LINC00649-213ENST00000608431 CEP162Q5TB80 1403 aa9.07□□□□□ -0.96
LINC00649-213ENST00000608431 RIMS2Q9UQ26 1411 aa9.07□□□□□ -0.96
LINC00649-213ENST00000608431 PTPN23Q9H3S7 1636 aa9.07□□□□□ -0.96
LINC00649-213ENST00000608431 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC00649-213ENST00000608431 MYOM2P54296 1465 aa9.07□□□□□ -0.96
LINC00649-213ENST00000608431 SOS2Q07890 1332 aaPredicted RBP9.06□□□□□ -0.96
LINC00649-213ENST00000608431 TMEM131LA2VDJ0 1609 aa9.06□□□□□ -0.96
LINC00649-213ENST00000608431 NWD2Q9ULI1 1742 aa9.06□□□□□ -0.96
LINC00649-213ENST00000608431 KRT27Q7Z3Y8 459 aa9.06□□□□□ -0.96
LINC00649-213ENST00000608431 NOS1P29475 1434 aa9.05□□□□□ -0.96
LINC00649-213ENST00000608431 ADAMTS13Q76LX8 1427 aa9.05□□□□□ -0.96
LINC00649-213ENST00000608431 LMTK2Q8IWU2 1503 aa9.05□□□□□ -0.96
LINC00649-213ENST00000608431 ADGRB2O60241 1585 aa9.05□□□□□ -0.96
LINC00649-213ENST00000608431 UNC5CLQ8IV45 518 aa9.05□□□□□ -0.96
LINC00649-213ENST00000608431 SEPT12Q8IYM1 358 aa9.05□□□□□ -0.96
LINC00649-213ENST00000608431 AMOTL2Q9Y2J4 779 aa9.05□□□□□ -0.96
LINC00649-213ENST00000608431 DISP2A7MBM2 1401 aa9.05□□□□□ -0.96
LINC00649-213ENST00000608431 EN1Q05925 392 aaPredicted RBP9.04□□□□□ -0.96
LINC00649-213ENST00000608431 ERBINQ96RT1 1412 aa9.04□□□□□ -0.96
LINC00649-213ENST00000608431 ADGRL3Q9HAR2 1447 aa9.04□□□□□ -0.96
LINC00649-213ENST00000608431 SLIT2O94813 1529 aa9.03□□□□□ -0.96
LINC00649-213ENST00000608431 RREB1Q92766 1687 aa9.03□□□□□ -0.96
LINC00649-213ENST00000608431 GOLGB1Q14789 3259 aaKnown RBP9.02□□□□□ -0.97
LINC00649-213ENST00000608431 PLCH1Q4KWH8 1693 aa9.02□□□□□ -0.97
LINC00649-213ENST00000608431 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
LINC00649-213ENST00000608431 SPON1Q9HCB6 807 aa9.02□□□□□ -0.97
LINC00649-213ENST00000608431 C1orf167Q5SNV9 1468 aa9.02□□□□□ -0.97
LINC00649-213ENST00000608431 PARD3Q8TEW0 1356 aa9.01□□□□□ -0.97
LINC00649-213ENST00000608431 GIGYF1O75420 1035 aaPredicted RBP9.01□□□□□ -0.97
LINC00649-213ENST00000608431 NUP188Q5SRE5 1749 aa9.01□□□□□ -0.97
LINC00649-213ENST00000608431 PTPRUQ92729 1446 aa9.01□□□□□ -0.97
LINC00649-213ENST00000608431 USP32Q8NFA0 1604 aa9□□□□□ -0.97
LINC00649-213ENST00000608431 CROCC2H7BZ55 1655 aa9□□□□□ -0.97
LINC00649-213ENST00000608431 VPS72Q15906 364 aa8.99□□□□□ -0.97
LINC00649-213ENST00000608431 KIF15Q9NS87 1388 aa8.99□□□□□ -0.97
LINC00649-213ENST00000608431 A0A0G2JS52 829 aa8.98□□□□□ -0.97
LINC00649-213ENST00000608431 KCNQ2O43526 872 aa8.98□□□□□ -0.97
LINC00649-213ENST00000608431 MYT1Q01538 1121 aa8.98□□□□□ -0.97
LINC00649-213ENST00000608431 NBPF8Q3BBV2 869 aa8.98□□□□□ -0.97
LINC00649-213ENST00000608431 NBPF14Q5TI25 921 aa8.98□□□□□ -0.97
LINC00649-213ENST00000608431 NPHP3Q7Z494 1330 aa8.98□□□□□ -0.97
LINC00649-213ENST00000608431 EZH2Q15910 746 aaKnown RBP8.97□□□□□ -0.97
LINC00649-213ENST00000608431 PCGF6Q9BYE7 350 aa8.97□□□□□ -0.97
LINC00649-213ENST00000608431 CCDC9Q9Y3X0 531 aaKnown RBP8.97□□□□□ -0.97
LINC00649-213ENST00000608431 NRXN3Q9Y4C0 1643 aa8.97□□□□□ -0.97
LINC00649-213ENST00000608431 IQGAP3Q86VI3 1631 aa8.96□□□□□ -0.98
LINC00649-213ENST00000608431 ORAI2Q96SN7 254 aa8.96□□□□□ -0.98
LINC00649-213ENST00000608431 CAMKK2Q96RR4 588 aa8.95□□□□□ -0.98
LINC00649-213ENST00000608431 PXDNQ92626 1479 aa8.95□□□□□ -0.98
LINC00649-213ENST00000608431 PPARGC1BQ86YN6 1023 aaKnown RBP8.94□□□□□ -0.98
LINC00649-213ENST00000608431 AKT1S1Q96B36 256 aa8.94□□□□□ -0.98
LINC00649-213ENST00000608431 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
LINC00649-213ENST00000608431 ADGRL2O95490 1459 aa8.94□□□□□ -0.98
LINC00649-213ENST00000608431 NRKQ7Z2Y5 1582 aa8.94□□□□□ -0.98
LINC00649-213ENST00000608431 CHGAP10645 457 aaKnown RBP8.93□□□□□ -0.98
LINC00649-213ENST00000608431 LRPPRCP42704 1394 aaKnown RBP8.93□□□□□ -0.98
LINC00649-213ENST00000608431 MYOM3Q5VTT5 1437 aa8.93□□□□□ -0.98
LINC00649-213ENST00000608431 MYOM1P52179 1685 aa8.93□□□□□ -0.98
LINC00649-213ENST00000608431 NRAPQ86VF7 1730 aa8.93□□□□□ -0.98
LINC00649-213ENST00000608431 ABCA3Q99758 1704 aa8.93□□□□□ -0.98
LINC00649-213ENST00000608431 PCNTO95613 3336 aa8.93□□□□□ -0.98
LINC00649-213ENST00000608431 CASZ1Q86V15 1759 aa8.92□□□□□ -0.98
LINC00649-213ENST00000608431 NEXMIFQ5QGS0 1516 aa8.91□□□□□ -0.98
LINC00649-213ENST00000608431 SLC34A2O95436 690 aa8.91□□□□□ -0.98
LINC00649-213ENST00000608431 HAP1P54257 671 aaPredicted RBP8.91□□□□□ -0.98
LINC00649-213ENST00000608431 RRP7BPQ9NSQ0 103 aa8.91□□□□□ -0.98
LINC00649-213ENST00000608431 THSD7AQ9UPZ6 1657 aa8.91□□□□□ -0.98
LINC00649-213ENST00000608431 APBA3O96018 575 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms