RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 NOB1Q9ULX3 412 aaKnown RBP12.92□□□□□ -0.34
CTCFL-216ENST00000608263 LRPPRCP42704 1394 aaKnown RBP12.92□□□□□ -0.34
CTCFL-216ENST00000608263 CHMP5Q9NZZ3 219 aa12.92□□□□□ -0.34
CTCFL-216ENST00000608263 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
CTCFL-216ENST00000608263 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
CTCFL-216ENST00000608263 PRAM1Q96QH2 718 aa12.91□□□□□ -0.34
CTCFL-216ENST00000608263 CHMP4BQ9H444 224 aaKnown RBP12.91□□□□□ -0.34
CTCFL-216ENST00000608263 COG3Q96JB2 828 aa12.91□□□□□ -0.34
CTCFL-216ENST00000608263 DDX49Q9Y6V7 483 aaKnown RBP12.91□□□□□ -0.34
CTCFL-216ENST00000608263 DENND4BO75064 1496 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-216ENST00000608263 ATP10BO94823 1461 aa12.9□□□□□ -0.34
CTCFL-216ENST00000608263 PROSER2Q86WR7 435 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-216ENST00000608263 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.34
CTCFL-216ENST00000608263 PRAG1Q86YV5 1406 aa12.9□□□□□ -0.34
CTCFL-216ENST00000608263 FBLN1P23142 703 aa12.9□□□□□ -0.34
CTCFL-216ENST00000608263 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
CTCFL-216ENST00000608263 TRAK2O60296 914 aa12.9□□□□□ -0.35
CTCFL-216ENST00000608263 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.35
CTCFL-216ENST00000608263 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
CTCFL-216ENST00000608263 NSD3Q9BZ95 1437 aa12.89□□□□□ -0.35
CTCFL-216ENST00000608263 ATF3P18847 181 aa12.89□□□□□ -0.35
CTCFL-216ENST00000608263 OS9Q13438 667 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-216ENST00000608263 PRKAR2BP31323 418 aa12.88□□□□□ -0.35
CTCFL-216ENST00000608263 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
CTCFL-216ENST00000608263 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
CTCFL-216ENST00000608263 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
CTCFL-216ENST00000608263 RAPGEF6Q8TEU7 1601 aa12.88□□□□□ -0.35
CTCFL-216ENST00000608263 RLBP1P12271 317 aa12.88□□□□□ -0.35
CTCFL-216ENST00000608263 EVA1CP58658 441 aa12.88□□□□□ -0.35
CTCFL-216ENST00000608263 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
CTCFL-216ENST00000608263 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
CTCFL-216ENST00000608263 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
CTCFL-216ENST00000608263 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
CTCFL-216ENST00000608263 CALD1Q05682 793 aaKnown RBP12.87□□□□□ -0.35
CTCFL-216ENST00000608263 SSH1Q8WYL5 1049 aa12.87□□□□□ -0.35
CTCFL-216ENST00000608263 NLRP6P59044 892 aa12.86□□□□□ -0.35
CTCFL-216ENST00000608263 TMEM57Q8N5G2 664 aa12.86□□□□□ -0.35
CTCFL-216ENST00000608263 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
CTCFL-216ENST00000608263 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
CTCFL-216ENST00000608263 SYTL4Q96C24 671 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-216ENST00000608263 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
CTCFL-216ENST00000608263 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
CTCFL-216ENST00000608263 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTCFL-216ENST00000608263 DISP1Q96F81 1524 aa12.86□□□□□ -0.35
CTCFL-216ENST00000608263 ATF7IPQ6VMQ6 1270 aa12.85□□□□□ -0.35
CTCFL-216ENST00000608263 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-216ENST00000608263 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
CTCFL-216ENST00000608263 KIF14Q15058 1648 aa12.84□□□□□ -0.35
CTCFL-216ENST00000608263 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
CTCFL-216ENST00000608263 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
CTCFL-216ENST00000608263 CABP1Q9NZU7 370 aa12.84□□□□□ -0.35
CTCFL-216ENST00000608263 MCM4P33991 863 aa12.84□□□□□ -0.35
CTCFL-216ENST00000608263 RILPL2Q969X0 211 aa12.84□□□□□ -0.35
CTCFL-216ENST00000608263 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
CTCFL-216ENST00000608263 PIP4K2BP78356 416 aa12.83□□□□□ -0.36
CTCFL-216ENST00000608263 WAPLQ7Z5K2 1190 aa12.83□□□□□ -0.36
CTCFL-216ENST00000608263 WDR63Q8IWG1 891 aa12.83□□□□□ -0.36
CTCFL-216ENST00000608263 IDI1Q13907 227 aa12.83□□□□□ -0.36
CTCFL-216ENST00000608263 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.36
CTCFL-216ENST00000608263 FAM135AQ9P2D6 1515 aa12.82□□□□□ -0.36
CTCFL-216ENST00000608263 KCNJ4P48050 445 aa12.82□□□□□ -0.36
CTCFL-216ENST00000608263 KIF16BQ96L93 1317 aa12.82□□□□□ -0.36
CTCFL-216ENST00000608263 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
CTCFL-216ENST00000608263 KIAA0556O60303 1618 aa12.82□□□□□ -0.36
CTCFL-216ENST00000608263 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
CTCFL-216ENST00000608263 TRIM27P14373 513 aa12.82□□□□□ -0.36
CTCFL-216ENST00000608263 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
CTCFL-216ENST00000608263 ABTB2Q8N961 1025 aa12.81□□□□□ -0.36
CTCFL-216ENST00000608263 SLC52A1Q9NWF4 448 aa12.81□□□□□ -0.36
CTCFL-216ENST00000608263 DCTN1Q14203 1278 aa12.8□□□□□ -0.36
CTCFL-216ENST00000608263 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
CTCFL-216ENST00000608263 ANKLE2Q86XL3 938 aa12.8□□□□□ -0.36
CTCFL-216ENST00000608263 NLRP2Q9NX02 1062 aa12.8□□□□□ -0.36
CTCFL-216ENST00000608263 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
CTCFL-216ENST00000608263 NUTM2BA6NNL0 878 aaPredicted RBP12.79□□□□□ -0.36
CTCFL-216ENST00000608263 NUTM2EB1AL46 878 aaPredicted RBP12.79□□□□□ -0.36
CTCFL-216ENST00000608263 NUTM2AQ8IVF1 878 aaPredicted RBP12.79□□□□□ -0.36
CTCFL-216ENST00000608263 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
CTCFL-216ENST00000608263 A2MP01023 1474 aa12.79□□□□□ -0.36
CTCFL-216ENST00000608263 SYCP2Q9BX26 1530 aa12.79□□□□□ -0.36
CTCFL-216ENST00000608263 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
CTCFL-216ENST00000608263 HSP90AA2PQ14568 343 aaPredicted RBP12.79□□□□□ -0.36
CTCFL-216ENST00000608263 STK31Q9BXU1 1019 aa12.78□□□□□ -0.36
CTCFL-216ENST00000608263 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
CTCFL-216ENST00000608263 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
CTCFL-216ENST00000608263 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
CTCFL-216ENST00000608263 SCAF11Q99590 1463 aaKnown RBP12.78□□□□□ -0.36
CTCFL-216ENST00000608263 ST18O60284 1047 aa12.78□□□□□ -0.36
CTCFL-216ENST00000608263 TWISTNBQ3B726 338 aaPredicted RBP12.78□□□□□ -0.36
CTCFL-216ENST00000608263 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
CTCFL-216ENST00000608263 MPNDQ8N594 471 aa12.78□□□□□ -0.36
CTCFL-216ENST00000608263 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
CTCFL-216ENST00000608263 MCCP23508 829 aa12.78□□□□□ -0.36
CTCFL-216ENST00000608263 RNF214Q8ND24 703 aa12.77□□□□□ -0.36
CTCFL-216ENST00000608263 CDK19Q9BWU1 502 aa12.77□□□□□ -0.36
CTCFL-216ENST00000608263 STRN4Q9NRL3 753 aa12.77□□□□□ -0.36
CTCFL-216ENST00000608263 GPRASP1Q5JY77 1395 aa12.77□□□□□ -0.36
CTCFL-216ENST00000608263 ZNF428Q96B54 188 aa12.77□□□□□ -0.37
CTCFL-216ENST00000608263 MRE11P49959 708 aa12.77□□□□□ -0.37
CTCFL-216ENST00000608263 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms